Mutagenetix > Incidental Mutation

Incidental Mutation 'R0928:Prmt9'

80654

Institutional Source

Beutler Lab

Gene Symbol

Prmt9

Ensembl Gene

ENSMUSG00000037134

Gene Name

protein arginine methyltransferase 9

Synonyms

Prmt10

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.231) question?

Stock #

R0928 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

78276026-78307967 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 78307805 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Valine to Alanine at position 823 (V823A)

Ref Sequence

ENSEMBL: ENSMUSP00000112692 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000056237] [ENSMUST00000118622] [ENSMUST00000210040]

AlphaFold

Q3U3W5

Predicted Effect

probably damaging
Transcript: ENSMUST00000056237
AA Change: V823A

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000050181
Gene: ENSMUSG00000037134
AA Change: V823A

Domain	Start	End	E-Value	Type
low complexity region	5	21	N/A	INTRINSIC
Pfam:TPR_11	67	132	1.2e-7	PFAM
Pfam:TPR_2	102	134	7.9e-5	PFAM
Pfam:PrmA	168	257	2.5e-10	PFAM
internal_repeat_1	585	836	1.37e-10	PROSPERO

Predicted Effect

probably damaging
Transcript: ENSMUST00000118622
AA Change: V823A

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000112692
Gene: ENSMUSG00000037134
AA Change: V823A

Domain	Start	End	E-Value	Type
low complexity region	5	21	N/A	INTRINSIC
Pfam:TPR_2	102	134	3e-5	PFAM
Pfam:PrmA	168	257	4.9e-10	PFAM
internal_repeat_1	585	836	1.05e-10	PROSPERO

Predicted Effect

probably benign
Transcript: ENSMUST00000210040

Coding Region Coverage

1x: 99.2%
3x: 98.1%
10x: 93.0%
20x: 75.6%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 51 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abca12	T	A	1: 71,388,333 (GRCm39)	D179V	probably benign	Het
Abcc1	T	C	16: 14,207,849 (GRCm39)		probably null	Het
Adad1	G	A	3: 37,130,889 (GRCm39)		probably null	Het
Apobec4	T	C	1: 152,632,028 (GRCm39)	Y19H	probably damaging	Het
Bco2	T	A	9: 50,457,231 (GRCm39)	T104S	probably damaging	Het
Bnc1	A	G	7: 81,623,250 (GRCm39)	V659A	probably benign	Het
Ccdc168	C	A	1: 44,096,388 (GRCm39)	S1570I	possibly damaging	Het
Ccs	T	C	19: 4,875,988 (GRCm39)	E184G	probably damaging	Het
Cfap70	T	G	14: 20,493,987 (GRCm39)	K97N	probably damaging	Het
Cracdl	T	C	1: 37,663,663 (GRCm39)	D745G	possibly damaging	Het
Daam2	T	C	17: 49,795,255 (GRCm39)	I313V	probably benign	Het
Dach1	T	C	14: 98,153,268 (GRCm39)	S467G	probably damaging	Het
Dnah11	A	G	12: 118,009,297 (GRCm39)	S2122P	probably damaging	Het
Dnah3	T	A	7: 119,629,274 (GRCm39)	D1427V	probably damaging	Het
Dnai1	T	C	4: 41,602,566 (GRCm39)	F97L	possibly damaging	Het
Dsc1	A	T	18: 20,243,306 (GRCm39)		probably null	Het
En2	A	T	5: 28,375,329 (GRCm39)	K291*	probably null	Het
Eps15	T	C	4: 109,170,160 (GRCm39)	V154A	possibly damaging	Het
Etnk1	A	G	6: 143,130,429 (GRCm39)	I183V	probably benign	Het
Fcrlb	A	T	1: 170,735,509 (GRCm39)	V255D	possibly damaging	Het
Fry	A	T	5: 150,360,549 (GRCm39)	E52V	probably damaging	Het
Garre1	A	T	7: 33,947,671 (GRCm39)		probably null	Het
Gm57858	A	C	3: 36,079,515 (GRCm39)	N258K	possibly damaging	Het
Gtf2h4	T	C	17: 35,981,777 (GRCm39)	Y152C	probably damaging	Het
Hao1	C	A	2: 134,347,536 (GRCm39)	L256F	possibly damaging	Het
Helz	T	A	11: 107,517,519 (GRCm39)	I685K	probably damaging	Het
Hjurp	GT	GTT	1: 88,194,246 (GRCm39)		probably null	Het
Izumo2	A	T	7: 44,364,847 (GRCm39)	I171F	possibly damaging	Het
Krt87	C	A	15: 101,389,161 (GRCm39)	C57F	probably benign	Het
Mapkbp1	A	G	2: 119,845,849 (GRCm39)	H400R	probably benign	Het
Megf6	T	A	4: 154,261,504 (GRCm39)	V43E	probably damaging	Het
Mmut	T	C	17: 41,248,174 (GRCm39)	I67T	probably benign	Het
Ninl	A	T	2: 150,805,395 (GRCm39)	V396E	probably damaging	Het
Nvl	A	T	1: 180,921,467 (GRCm39)	V844E	probably benign	Het
Or2b6	C	T	13: 21,823,126 (GRCm39)	C189Y	probably damaging	Het
P2rx3	A	T	2: 84,865,642 (GRCm39)	M1K	probably null	Het
Pabpn1l	T	C	8: 123,349,358 (GRCm39)	T20A	probably benign	Het
Ppp3r2	C	A	4: 49,681,439 (GRCm39)		probably null	Het
Prmt6	C	T	3: 110,157,998 (GRCm39)	G97D	probably damaging	Het
Skic3	T	G	13: 76,261,711 (GRCm39)	L142W	probably damaging	Het
Skint11	C	A	4: 114,101,798 (GRCm39)	D79E	possibly damaging	Het
Slc17a8	T	A	10: 89,434,545 (GRCm39)	H194L	probably damaging	Het
Slco6c1	T	A	1: 97,032,573 (GRCm39)	I293F	possibly damaging	Het
Tcl1b4	A	T	12: 105,168,865 (GRCm39)	H43L	probably benign	Het
Tm9sf1	T	C	14: 55,873,914 (GRCm39)	D528G	probably damaging	Het
Tpbpb	C	T	13: 61,049,989 (GRCm39)	V47I	probably benign	Het
Ttn	G	T	2: 76,737,876 (GRCm39)		probably benign	Het
Usp28	T	G	9: 48,942,191 (GRCm39)	S341A	possibly damaging	Het
Vwa5a	T	C	9: 38,639,303 (GRCm39)	Y345H	probably damaging	Het
Wdr11	C	A	7: 129,208,377 (GRCm39)	D377E	probably damaging	Het
Zer1	A	G	2: 29,991,775 (GRCm39)		probably null	Het

Other mutations in Prmt9

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01801:Prmt9	APN	8	78,289,069 (GRCm39)	missense	probably damaging	1.00
IGL02306:Prmt9	APN	8	78,287,447 (GRCm39)	missense	probably benign	0.06
IGL02971:Prmt9	APN	8	78,291,698 (GRCm39)	missense	probably benign	0.00
1mM(1):Prmt9	UTSW	8	78,282,393 (GRCm39)	missense	probably benign	0.01
R0004:Prmt9	UTSW	8	78,282,411 (GRCm39)	missense	possibly damaging	0.81
R1328:Prmt9	UTSW	8	78,299,283 (GRCm39)	missense	possibly damaging	0.86
R1777:Prmt9	UTSW	8	78,291,737 (GRCm39)	missense	probably benign	0.05
R1826:Prmt9	UTSW	8	78,282,303 (GRCm39)	nonsense	probably null
R1925:Prmt9	UTSW	8	78,303,968 (GRCm39)	missense	possibly damaging	0.52
R3855:Prmt9	UTSW	8	78,294,894 (GRCm39)	missense	probably benign	0.22
R3856:Prmt9	UTSW	8	78,294,894 (GRCm39)	missense	probably benign	0.22
R4089:Prmt9	UTSW	8	78,299,174 (GRCm39)	missense	probably benign	0.00
R4963:Prmt9	UTSW	8	78,282,358 (GRCm39)	missense	probably damaging	1.00
R5196:Prmt9	UTSW	8	78,291,626 (GRCm39)	missense	probably benign	0.30
R5413:Prmt9	UTSW	8	78,298,638 (GRCm39)	missense	possibly damaging	0.95
R5975:Prmt9	UTSW	8	78,287,647 (GRCm39)	intron	probably benign
R6271:Prmt9	UTSW	8	78,304,092 (GRCm39)	missense	probably damaging	0.96
R7023:Prmt9	UTSW	8	78,276,086 (GRCm39)	start gained	probably benign
R7107:Prmt9	UTSW	8	78,294,880 (GRCm39)	missense	possibly damaging	0.62
R7159:Prmt9	UTSW	8	78,282,393 (GRCm39)	missense	probably benign	0.01
R7209:Prmt9	UTSW	8	78,291,627 (GRCm39)	missense	probably benign	0.32
R7770:Prmt9	UTSW	8	78,285,814 (GRCm39)	splice site	probably null
R7819:Prmt9	UTSW	8	78,294,973 (GRCm39)	missense	probably benign	0.11
R7959:Prmt9	UTSW	8	78,287,594 (GRCm39)	missense	probably damaging	1.00
R9106:Prmt9	UTSW	8	78,276,358 (GRCm39)	missense	probably benign	0.05
R9301:Prmt9	UTSW	8	78,282,374 (GRCm39)	nonsense	probably null
R9368:Prmt9	UTSW	8	78,285,663 (GRCm39)	missense	probably benign	0.00
R9665:Prmt9	UTSW	8	78,307,267 (GRCm39)	missense	probably benign	0.18
X0027:Prmt9	UTSW	8	78,287,512 (GRCm39)	missense	possibly damaging	0.68

Predicted Primers

PCR Primer
(F):5'- TACTTTCGACAGGTCCGTGTGTGCAG -3'
(R):5'- CTTAACTGAGATGACCACGAGGCAGAC -3'

Sequencing Primer
(F):5'- GGTTTCATCTGTGCCTGGAT -3'
(R):5'- GCTCCTTGTCTAGAAAGCAAAGTC -3'

Posted On

2013-11-07