Incidental Mutation 'R0885:Tubgcp5'
ID 81153
Institutional Source Beutler Lab
Gene Symbol Tubgcp5
Ensembl Gene ENSMUSG00000033790
Gene Name tubulin, gamma complex component 5
Synonyms GCP5, B130010C12Rik
MMRRC Submission 039052-MU
Accession Numbers
Essential gene? Probably essential (E-score: 0.967) question?
Stock # R0885 (G1)
Quality Score 225
Status Not validated
Chromosome 7
Chromosomal Location 55443873-55481207 bp(+) (GRCm39)
Type of Mutation nonsense
DNA Base Change (assembly) T to A at 55455803 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Leucine to Stop codon at position 277 (L277*)
Ref Sequence ENSEMBL: ENSMUSP00000146111 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000032627] [ENSMUST00000205796] [ENSMUST00000206191]
AlphaFold Q8BKN5
Predicted Effect probably null
Transcript: ENSMUST00000032627
AA Change: L277*
SMART Domains Protein: ENSMUSP00000032627
Gene: ENSMUSG00000033790
AA Change: L277*

DomainStartEndE-ValueType
low complexity region 109 124 N/A INTRINSIC
Pfam:Spc97_Spc98 273 942 1.2e-126 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000205779
Predicted Effect probably null
Transcript: ENSMUST00000205796
AA Change: L277*
Predicted Effect probably benign
Transcript: ENSMUST00000206191
Predicted Effect noncoding transcript
Transcript: ENSMUST00000206660
Predicted Effect noncoding transcript
Transcript: ENSMUST00000206789
Coding Region Coverage
  • 1x: 99.3%
  • 3x: 98.7%
  • 10x: 96.9%
  • 20x: 92.9%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 52 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
1700020L13Rik T A 7: 29,980,094 (GRCm39) Y46* probably null Het
Adam18 T C 8: 25,141,802 (GRCm39) K256E probably damaging Het
Adam20 T A 8: 41,249,595 (GRCm39) H568Q probably benign Het
Ambp A G 4: 63,069,705 (GRCm39) L107P probably damaging Het
Art1 T C 7: 101,756,541 (GRCm39) F244S probably damaging Het
Asxl2 C A 12: 3,551,458 (GRCm39) L1067I probably damaging Het
Atm T C 9: 53,371,123 (GRCm39) T2242A probably benign Het
Atp2c1 C T 9: 105,298,772 (GRCm39) probably null Het
Bptf A G 11: 106,934,617 (GRCm39) Y2819H probably damaging Het
Caskin1 G A 17: 24,724,668 (GRCm39) R1152H probably damaging Het
Chd7 T A 4: 8,866,432 (GRCm39) L868Q probably damaging Het
Cyp2d40 T C 15: 82,645,116 (GRCm39) E178G unknown Het
Dclk1 G T 3: 55,394,728 (GRCm39) R103S probably damaging Het
Des A G 1: 75,337,374 (GRCm39) T105A probably damaging Het
Ebf3 T C 7: 136,827,613 (GRCm39) T262A probably benign Het
Epha4 A G 1: 77,359,576 (GRCm39) V759A probably damaging Het
Fryl A T 5: 73,246,539 (GRCm39) F1078I probably damaging Het
Il20 T C 1: 130,838,518 (GRCm39) I60V probably benign Het
Kif3c A T 12: 3,415,981 (GRCm39) M1L probably benign Het
Lhfpl5 A T 17: 28,795,011 (GRCm39) I13F probably damaging Het
Lin28b C T 10: 45,257,324 (GRCm39) G218E probably damaging Het
Lrp2 A T 2: 69,312,697 (GRCm39) N2530K possibly damaging Het
Matn2 T A 15: 34,316,751 (GRCm39) F31Y possibly damaging Het
Mcm6 T C 1: 128,276,670 (GRCm39) N307D probably benign Het
Mmp16 A T 4: 18,054,491 (GRCm39) R332S probably benign Het
Mpdz T A 4: 81,287,829 (GRCm39) T477S probably benign Het
Mrgprb3 C A 7: 48,292,844 (GRCm39) G236W probably damaging Het
Mrpl47 T C 3: 32,784,335 (GRCm39) D145G probably damaging Het
Myo6 T C 9: 80,149,503 (GRCm39) S150P probably damaging Het
Naca C A 10: 127,876,048 (GRCm39) S360* probably null Het
Or2ak6 C T 11: 58,592,913 (GRCm39) P129S possibly damaging Het
Phip C A 9: 82,757,448 (GRCm39) A1575S probably benign Het
Pip4p1 T C 14: 51,167,763 (GRCm39) E54G probably damaging Het
Plxna2 T C 1: 194,326,864 (GRCm39) M266T probably benign Het
Ppp1r16a C T 15: 76,577,869 (GRCm39) Q328* probably null Het
Prag1 T C 8: 36,570,421 (GRCm39) F335L probably benign Het
Prmt2 A G 10: 76,058,399 (GRCm39) Y137H probably damaging Het
Psme3ip1 C A 8: 95,302,407 (GRCm39) C208F probably damaging Het
Ptgds T C 2: 25,357,357 (GRCm39) D184G possibly damaging Het
Ptpn5 T C 7: 46,738,359 (GRCm39) Y241C probably benign Het
Pxdn G A 12: 30,053,401 (GRCm39) V1193M probably benign Het
Raet1e T A 10: 22,057,986 (GRCm39) probably benign Het
Rttn A G 18: 89,001,934 (GRCm39) D282G probably benign Het
Sis G A 3: 72,819,282 (GRCm39) R1425* probably null Het
Slco2a1 G T 9: 102,959,582 (GRCm39) M559I probably damaging Het
Spata4 C T 8: 55,053,879 (GRCm39) A15V probably damaging Het
Spop T C 11: 95,361,453 (GRCm39) S14P probably benign Het
Tcof1 A T 18: 60,968,922 (GRCm39) D230E possibly damaging Het
Ubxn10 A T 4: 138,447,881 (GRCm39) V265E probably damaging Het
Ugt2b36 T A 5: 87,239,848 (GRCm39) Y179F probably benign Het
Wdr37 A C 13: 8,885,288 (GRCm39) probably null Het
Zfp593 A G 4: 133,972,224 (GRCm39) V94A probably benign Het
Other mutations in Tubgcp5
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00969:Tubgcp5 APN 7 55,456,343 (GRCm39) missense possibly damaging 0.91
IGL01291:Tubgcp5 APN 7 55,458,277 (GRCm39) missense possibly damaging 0.83
IGL01343:Tubgcp5 APN 7 55,445,779 (GRCm39) splice site probably benign
IGL01597:Tubgcp5 APN 7 55,456,580 (GRCm39) splice site probably benign
IGL01688:Tubgcp5 APN 7 55,464,766 (GRCm39) missense possibly damaging 0.92
IGL01843:Tubgcp5 APN 7 55,449,221 (GRCm39) missense probably benign 0.02
IGL01950:Tubgcp5 APN 7 55,455,836 (GRCm39) missense possibly damaging 0.93
IGL01957:Tubgcp5 APN 7 55,468,505 (GRCm39) missense probably damaging 1.00
IGL02902:Tubgcp5 APN 7 55,456,355 (GRCm39) nonsense probably null
IGL03105:Tubgcp5 APN 7 55,475,329 (GRCm39) missense probably damaging 1.00
ANU05:Tubgcp5 UTSW 7 55,458,277 (GRCm39) missense possibly damaging 0.83
R0078:Tubgcp5 UTSW 7 55,468,643 (GRCm39) missense probably damaging 1.00
R0322:Tubgcp5 UTSW 7 55,464,726 (GRCm39) missense probably damaging 0.98
R0362:Tubgcp5 UTSW 7 55,450,432 (GRCm39) missense probably damaging 1.00
R0449:Tubgcp5 UTSW 7 55,473,315 (GRCm39) missense probably benign
R0488:Tubgcp5 UTSW 7 55,479,086 (GRCm39) missense probably damaging 0.96
R0853:Tubgcp5 UTSW 7 55,464,599 (GRCm39) splice site probably benign
R1483:Tubgcp5 UTSW 7 55,475,455 (GRCm39) critical splice donor site probably null
R1746:Tubgcp5 UTSW 7 55,458,285 (GRCm39) missense probably benign 0.05
R1766:Tubgcp5 UTSW 7 55,464,768 (GRCm39) missense probably benign 0.15
R2148:Tubgcp5 UTSW 7 55,449,259 (GRCm39) missense probably damaging 1.00
R2229:Tubgcp5 UTSW 7 55,480,629 (GRCm39) missense probably damaging 1.00
R3766:Tubgcp5 UTSW 7 55,480,614 (GRCm39) missense probably damaging 0.98
R4154:Tubgcp5 UTSW 7 55,455,077 (GRCm39) missense probably benign 0.01
R4838:Tubgcp5 UTSW 7 55,443,933 (GRCm39) unclassified probably benign
R4948:Tubgcp5 UTSW 7 55,455,871 (GRCm39) missense probably benign 0.00
R5110:Tubgcp5 UTSW 7 55,458,385 (GRCm39) missense probably damaging 0.96
R5347:Tubgcp5 UTSW 7 55,473,433 (GRCm39) missense probably damaging 1.00
R5417:Tubgcp5 UTSW 7 55,475,409 (GRCm39) missense possibly damaging 0.90
R5574:Tubgcp5 UTSW 7 55,455,077 (GRCm39) missense probably benign 0.01
R5758:Tubgcp5 UTSW 7 55,468,643 (GRCm39) missense probably damaging 1.00
R5957:Tubgcp5 UTSW 7 55,464,710 (GRCm39) missense probably benign 0.03
R6014:Tubgcp5 UTSW 7 55,473,357 (GRCm39) missense probably benign
R6141:Tubgcp5 UTSW 7 55,456,526 (GRCm39) missense probably benign 0.30
R6289:Tubgcp5 UTSW 7 55,445,671 (GRCm39) missense probably benign 0.05
R6511:Tubgcp5 UTSW 7 55,467,140 (GRCm39) nonsense probably null
R6563:Tubgcp5 UTSW 7 55,475,409 (GRCm39) missense possibly damaging 0.90
R6574:Tubgcp5 UTSW 7 55,473,331 (GRCm39) missense probably benign
R6596:Tubgcp5 UTSW 7 55,456,382 (GRCm39) missense probably benign 0.38
R7016:Tubgcp5 UTSW 7 55,443,977 (GRCm39) missense possibly damaging 0.76
R7038:Tubgcp5 UTSW 7 55,455,114 (GRCm39) missense probably damaging 0.99
R7075:Tubgcp5 UTSW 7 55,479,155 (GRCm39) missense probably benign 0.04
R7083:Tubgcp5 UTSW 7 55,450,443 (GRCm39) nonsense probably null
R7213:Tubgcp5 UTSW 7 55,455,860 (GRCm39) missense probably damaging 0.97
R7284:Tubgcp5 UTSW 7 55,473,315 (GRCm39) missense probably benign
R7600:Tubgcp5 UTSW 7 55,458,261 (GRCm39) missense probably benign
R7813:Tubgcp5 UTSW 7 55,450,444 (GRCm39) missense possibly damaging 0.49
R7920:Tubgcp5 UTSW 7 55,466,310 (GRCm39) missense probably benign 0.00
R7948:Tubgcp5 UTSW 7 55,443,996 (GRCm39) missense probably benign 0.01
R8438:Tubgcp5 UTSW 7 55,454,363 (GRCm39) missense possibly damaging 0.67
R8499:Tubgcp5 UTSW 7 55,454,363 (GRCm39) missense possibly damaging 0.67
R9087:Tubgcp5 UTSW 7 55,467,106 (GRCm39) missense probably damaging 1.00
R9211:Tubgcp5 UTSW 7 55,456,331 (GRCm39) missense probably benign 0.05
R9269:Tubgcp5 UTSW 7 55,445,693 (GRCm39) missense possibly damaging 0.94
R9329:Tubgcp5 UTSW 7 55,479,181 (GRCm39) critical splice donor site probably null
R9355:Tubgcp5 UTSW 7 55,467,177 (GRCm39) critical splice donor site probably null
R9498:Tubgcp5 UTSW 7 55,463,233 (GRCm39) missense possibly damaging 0.46
R9687:Tubgcp5 UTSW 7 55,475,327 (GRCm39) critical splice acceptor site probably null
Z1088:Tubgcp5 UTSW 7 55,464,849 (GRCm39) missense probably benign
Predicted Primers PCR Primer
(F):5'- AATCCTGTGAAGTTTGACACTCTTCCC -3'
(R):5'- TGTTCCAGCACAGATCGTAAACAGC -3'

Sequencing Primer
(F):5'- CCCATTTTCGTGCAATTGACC -3'
(R):5'- GTTCATACACACTACAGAATTACGG -3'
Posted On 2013-11-07