Incidental Mutation 'R0940:Sel1l3'
ID 81383
Institutional Source Beutler Lab
Gene Symbol Sel1l3
Ensembl Gene ENSMUSG00000029189
Gene Name sel-1 suppressor of lin-12-like 3 (C. elegans)
Synonyms 2310045A20Rik
MMRRC Submission 039079-MU
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # R0940 (G1)
Quality Score 225
Status Validated
Chromosome 5
Chromosomal Location 53264425-53370794 bp(-) (GRCm39)
Type of Mutation splice site
DNA Base Change (assembly) C to T at 53301379 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000031090 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000031090]
AlphaFold Q80TS8
Predicted Effect probably benign
Transcript: ENSMUST00000031090
SMART Domains Protein: ENSMUSP00000031090
Gene: ENSMUSG00000029189

DomainStartEndE-ValueType
low complexity region 11 33 N/A INTRINSIC
SEL1 575 609 3.39e1 SMART
SEL1 611 647 1.85e1 SMART
SEL1 694 730 5.27e-5 SMART
SEL1 732 767 2.94e-3 SMART
SEL1 768 800 5.32e-1 SMART
SEL1 801 839 1.23e-5 SMART
SEL1 840 877 8.55e1 SMART
SEL1 952 988 2.56e-3 SMART
low complexity region 1048 1058 N/A INTRINSIC
transmembrane domain 1065 1087 N/A INTRINSIC
low complexity region 1102 1127 N/A INTRINSIC
Predicted Effect noncoding transcript
Transcript: ENSMUST00000104128
Predicted Effect noncoding transcript
Transcript: ENSMUST00000196435
Coding Region Coverage
  • 1x: 99.5%
  • 3x: 99.1%
  • 10x: 98.0%
  • 20x: 96.7%
Validation Efficiency 100% (68/68)
Allele List at MGI
Other mutations in this stock
Total: 63 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
1810064F22Rik C T 9: 22,119,367 (GRCm39) noncoding transcript Het
2610021A01Rik T G 7: 41,275,858 (GRCm39) I520M probably damaging Het
Ackr4 A G 9: 103,976,831 (GRCm39) F39L probably damaging Het
Adgre5 C T 8: 84,460,126 (GRCm39) S92N probably damaging Het
Adrb2 T C 18: 62,312,762 (GRCm39) D21G probably benign Het
Akr1c6 G A 13: 4,486,372 (GRCm39) E60K probably benign Het
Bcl7c T A 7: 127,306,503 (GRCm39) N96I possibly damaging Het
Brca1 A T 11: 101,422,969 (GRCm39) S106R possibly damaging Het
C6 A T 15: 4,764,717 (GRCm39) T138S probably benign Het
Cul3 T C 1: 80,300,564 (GRCm39) probably benign Het
Dnah8 T A 17: 31,022,217 (GRCm39) M3939K probably damaging Het
Dock4 T A 12: 40,681,626 (GRCm39) probably benign Het
Dsc2 T G 18: 20,183,116 (GRCm39) T101P probably damaging Het
Dynlt1b T C 17: 6,697,649 (GRCm39) probably benign Het
E330013P04Rik A G 19: 60,150,354 (GRCm39) noncoding transcript Het
Fggy A G 4: 95,585,238 (GRCm39) E39G probably benign Het
Fhip1a A G 3: 85,572,797 (GRCm39) V952A possibly damaging Het
Fmo6 A T 1: 162,753,795 (GRCm39) C116S probably benign Het
Gadd45a A G 6: 67,013,813 (GRCm39) I44T possibly damaging Het
Gmps A G 3: 63,883,743 (GRCm39) probably benign Het
Gnmt A G 17: 47,037,271 (GRCm39) L171P probably damaging Het
Hnrnpm G A 17: 33,868,976 (GRCm39) R523C probably damaging Het
Inpp5a T C 7: 139,105,654 (GRCm39) Y202H probably damaging Het
Kank3 C T 17: 34,036,450 (GRCm39) S106F probably damaging Het
Lmcd1 A G 6: 112,305,658 (GRCm39) D253G probably benign Het
Lrrk2 A T 15: 91,613,284 (GRCm39) I803F possibly damaging Het
Mybpc2 T C 7: 44,156,311 (GRCm39) K834R probably benign Het
Mycbp2 A T 14: 103,500,129 (GRCm39) probably benign Het
Myh4 A T 11: 67,133,689 (GRCm39) N243Y probably damaging Het
Myorg A G 4: 41,497,996 (GRCm39) Y545H probably damaging Het
Nfatc1 C T 18: 80,679,110 (GRCm39) M759I probably benign Het
Nipal4 A G 11: 46,041,139 (GRCm39) I352T possibly damaging Het
Nomo1 A G 7: 45,683,329 (GRCm39) E25G possibly damaging Het
Or10j27 A G 1: 172,958,020 (GRCm39) S255P probably benign Het
Or13a19 T C 7: 139,903,065 (GRCm39) I151T probably benign Het
Or14j7 A G 17: 38,234,591 (GRCm39) I45V probably damaging Het
Or1e32 T C 11: 73,705,050 (GRCm39) N286S probably damaging Het
Or4c116 T A 2: 88,942,419 (GRCm39) I146L probably benign Het
Or5p66 T C 7: 107,886,264 (GRCm39) D23G probably benign Het
Pabpn1l A G 8: 123,349,183 (GRCm39) V78A probably benign Het
Pde6b T A 5: 108,568,203 (GRCm39) I327N possibly damaging Het
Phrf1 T C 7: 140,834,768 (GRCm39) probably benign Het
Pkm C T 9: 59,575,818 (GRCm39) probably benign Het
Plxna2 G A 1: 194,482,863 (GRCm39) V1519I probably benign Het
Ppp2cb T C 8: 34,105,689 (GRCm39) probably null Het
Prickle2 A G 6: 92,387,984 (GRCm39) Y473H probably benign Het
Prpf3 A G 3: 95,751,535 (GRCm39) W389R probably damaging Het
Psme4 G A 11: 30,765,264 (GRCm39) E544K possibly damaging Het
Relb A T 7: 19,345,767 (GRCm39) D395E probably damaging Het
Rif1 GCCACCA GCCA 2: 52,000,336 (GRCm39) probably benign Het
Rnf213 A G 11: 119,307,389 (GRCm39) N683S probably benign Het
Rtel1 T C 2: 180,964,596 (GRCm39) C102R probably benign Het
Slc8a2 A G 7: 15,878,887 (GRCm39) T458A probably benign Het
Smc3 T A 19: 53,629,340 (GRCm39) M931K probably benign Het
Sorbs2 T C 8: 46,249,539 (GRCm39) V795A probably benign Het
Tgm3 A G 2: 129,854,326 (GRCm39) S2G probably benign Het
Tpbpa T C 13: 61,087,867 (GRCm39) T75A probably damaging Het
Trub1 A G 19: 57,473,495 (GRCm39) probably benign Het
Uggt2 A G 14: 119,328,604 (GRCm39) probably null Het
Ugt2a3 A G 5: 87,475,065 (GRCm39) V393A possibly damaging Het
Vav3 T A 3: 109,470,151 (GRCm39) M532K possibly damaging Het
Zfp616 A T 11: 73,975,850 (GRCm39) K706N probably damaging Het
Zkscan1 T C 5: 138,091,432 (GRCm39) F55S probably damaging Het
Other mutations in Sel1l3
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01152:Sel1l3 APN 5 53,273,675 (GRCm39) missense probably damaging 0.96
IGL01585:Sel1l3 APN 5 53,311,578 (GRCm39) missense probably damaging 0.99
IGL01717:Sel1l3 APN 5 53,357,510 (GRCm39) missense probably damaging 0.99
IGL01771:Sel1l3 APN 5 53,279,183 (GRCm39) missense probably damaging 0.99
IGL01926:Sel1l3 APN 5 53,357,485 (GRCm39) missense probably benign 0.26
IGL01963:Sel1l3 APN 5 53,357,680 (GRCm39) missense probably damaging 0.99
IGL02000:Sel1l3 APN 5 53,302,835 (GRCm39) missense probably damaging 1.00
IGL02132:Sel1l3 APN 5 53,327,747 (GRCm39) missense possibly damaging 0.89
IGL02198:Sel1l3 APN 5 53,297,141 (GRCm39) splice site probably benign
IGL02930:Sel1l3 APN 5 53,280,559 (GRCm39) missense possibly damaging 0.65
IGL03146:Sel1l3 APN 5 53,311,585 (GRCm39) missense probably benign 0.00
IGL03175:Sel1l3 APN 5 53,279,199 (GRCm39) missense probably damaging 1.00
R0083:Sel1l3 UTSW 5 53,295,244 (GRCm39) missense possibly damaging 0.79
R0108:Sel1l3 UTSW 5 53,295,244 (GRCm39) missense possibly damaging 0.79
R0108:Sel1l3 UTSW 5 53,295,244 (GRCm39) missense possibly damaging 0.79
R1027:Sel1l3 UTSW 5 53,302,820 (GRCm39) missense possibly damaging 0.68
R1117:Sel1l3 UTSW 5 53,329,949 (GRCm39) missense probably benign 0.00
R1145:Sel1l3 UTSW 5 53,289,169 (GRCm39) missense probably damaging 0.99
R1145:Sel1l3 UTSW 5 53,289,169 (GRCm39) missense probably damaging 0.99
R1146:Sel1l3 UTSW 5 53,274,445 (GRCm39) missense possibly damaging 0.79
R1146:Sel1l3 UTSW 5 53,274,445 (GRCm39) missense possibly damaging 0.79
R1345:Sel1l3 UTSW 5 53,357,559 (GRCm39) missense possibly damaging 0.86
R1370:Sel1l3 UTSW 5 53,357,559 (GRCm39) missense possibly damaging 0.86
R1503:Sel1l3 UTSW 5 53,295,271 (GRCm39) missense probably damaging 0.98
R1747:Sel1l3 UTSW 5 53,302,887 (GRCm39) missense possibly damaging 0.91
R1764:Sel1l3 UTSW 5 53,327,789 (GRCm39) nonsense probably null
R2872:Sel1l3 UTSW 5 53,295,225 (GRCm39) nonsense probably null
R2872:Sel1l3 UTSW 5 53,295,225 (GRCm39) nonsense probably null
R3434:Sel1l3 UTSW 5 53,274,432 (GRCm39) missense probably benign 0.44
R4043:Sel1l3 UTSW 5 53,345,396 (GRCm39) nonsense probably null
R4074:Sel1l3 UTSW 5 53,311,629 (GRCm39) missense probably damaging 0.99
R4727:Sel1l3 UTSW 5 53,301,525 (GRCm39) critical splice acceptor site probably null
R4788:Sel1l3 UTSW 5 53,289,175 (GRCm39) missense probably benign 0.41
R4900:Sel1l3 UTSW 5 53,289,184 (GRCm39) missense probably damaging 1.00
R5000:Sel1l3 UTSW 5 53,357,776 (GRCm39) missense probably damaging 0.97
R5090:Sel1l3 UTSW 5 53,357,388 (GRCm39) missense probably benign 0.03
R5330:Sel1l3 UTSW 5 53,343,351 (GRCm39) missense possibly damaging 0.80
R5456:Sel1l3 UTSW 5 53,357,378 (GRCm39) missense probably benign 0.13
R5544:Sel1l3 UTSW 5 53,357,644 (GRCm39) missense probably damaging 0.98
R5848:Sel1l3 UTSW 5 53,342,150 (GRCm39) missense possibly damaging 0.91
R6132:Sel1l3 UTSW 5 53,357,531 (GRCm39) missense possibly damaging 0.77
R6188:Sel1l3 UTSW 5 53,313,061 (GRCm39) missense possibly damaging 0.70
R6622:Sel1l3 UTSW 5 53,297,202 (GRCm39) missense probably damaging 0.98
R7015:Sel1l3 UTSW 5 53,329,916 (GRCm39) missense probably benign 0.03
R7200:Sel1l3 UTSW 5 53,301,451 (GRCm39) missense probably benign 0.22
R7271:Sel1l3 UTSW 5 53,273,704 (GRCm39) missense probably damaging 0.98
R7378:Sel1l3 UTSW 5 53,273,751 (GRCm39) missense probably benign 0.02
R7479:Sel1l3 UTSW 5 53,274,462 (GRCm39) missense probably damaging 0.99
R7563:Sel1l3 UTSW 5 53,343,326 (GRCm39) missense probably damaging 1.00
R7643:Sel1l3 UTSW 5 53,280,504 (GRCm39) splice site probably null
R7741:Sel1l3 UTSW 5 53,357,593 (GRCm39) missense probably damaging 1.00
R7743:Sel1l3 UTSW 5 53,293,227 (GRCm39) missense probably benign 0.07
R7861:Sel1l3 UTSW 5 53,301,406 (GRCm39) missense probably damaging 0.96
R7904:Sel1l3 UTSW 5 53,297,166 (GRCm39) missense probably benign 0.24
R8222:Sel1l3 UTSW 5 53,345,296 (GRCm39) critical splice donor site probably null
R8724:Sel1l3 UTSW 5 53,293,165 (GRCm39) nonsense probably null
R8788:Sel1l3 UTSW 5 53,332,148 (GRCm39) nonsense probably null
R8988:Sel1l3 UTSW 5 53,280,771 (GRCm39) missense probably damaging 0.96
R9111:Sel1l3 UTSW 5 53,279,213 (GRCm39) splice site probably benign
R9153:Sel1l3 UTSW 5 53,293,188 (GRCm39) missense probably benign 0.26
R9269:Sel1l3 UTSW 5 53,311,628 (GRCm39) missense probably damaging 1.00
R9399:Sel1l3 UTSW 5 53,265,486 (GRCm39) missense probably benign
R9455:Sel1l3 UTSW 5 53,289,157 (GRCm39) missense probably damaging 0.99
R9630:Sel1l3 UTSW 5 53,342,117 (GRCm39) missense possibly damaging 0.49
R9793:Sel1l3 UTSW 5 53,329,924 (GRCm39) missense probably benign 0.02
R9795:Sel1l3 UTSW 5 53,329,924 (GRCm39) missense probably benign 0.02
Z1088:Sel1l3 UTSW 5 53,273,538 (GRCm39) missense probably damaging 0.96
Predicted Primers PCR Primer
(F):5'- TGAACCAGTGACAAACGTGCGG -3'
(R):5'- AGCAACGATTGGCTCAGATGCTC -3'

Sequencing Primer
(F):5'- GTGTCACCTTCAGAATGTCACAG -3'
(R):5'- CTCAGATGCTCTTCTGGGGAC -3'
Posted On 2013-11-07