Incidental Mutation 'R0862:Iqca1'
ID 82137
Institutional Source Beutler Lab
Gene Symbol Iqca1
Ensembl Gene ENSMUSG00000026301
Gene Name IQ motif containing with AAA domain 1
Synonyms 4930465P12Rik, 4930585L22Rik, Iqca
MMRRC Submission 039036-MU
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # R0862 (G1)
Quality Score 225
Status Validated
Chromosome 1
Chromosomal Location 89969854-90081123 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) C to A at 90070453 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Glycine to Valine at position 133 (G133V)
Ref Sequence ENSEMBL: ENSMUSP00000108717 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000113094] [ENSMUST00000113094] [ENSMUST00000212394] [ENSMUST00000212394]
AlphaFold Q9CUL5
Predicted Effect probably null
Transcript: ENSMUST00000113094
AA Change: G133V

PolyPhen 2 Score 0.966 (Sensitivity: 0.77; Specificity: 0.95)
SMART Domains Protein: ENSMUSP00000108717
Gene: ENSMUSG00000026301
AA Change: G133V

DomainStartEndE-ValueType
IQ 205 227 6.97e0 SMART
coiled coil region 340 380 N/A INTRINSIC
coiled coil region 425 450 N/A INTRINSIC
low complexity region 464 487 N/A INTRINSIC
AAA 567 706 1.08e-3 SMART
low complexity region 812 829 N/A INTRINSIC
Predicted Effect probably null
Transcript: ENSMUST00000113094
AA Change: G133V

PolyPhen 2 Score 0.966 (Sensitivity: 0.77; Specificity: 0.95)
SMART Domains Protein: ENSMUSP00000108717
Gene: ENSMUSG00000026301
AA Change: G133V

DomainStartEndE-ValueType
IQ 205 227 6.97e0 SMART
coiled coil region 340 380 N/A INTRINSIC
coiled coil region 425 450 N/A INTRINSIC
low complexity region 464 487 N/A INTRINSIC
AAA 567 706 1.08e-3 SMART
low complexity region 812 829 N/A INTRINSIC
Predicted Effect noncoding transcript
Transcript: ENSMUST00000186522
Predicted Effect noncoding transcript
Transcript: ENSMUST00000211999
Predicted Effect probably null
Transcript: ENSMUST00000212394
AA Change: G133V

PolyPhen 2 Score 0.071 (Sensitivity: 0.94; Specificity: 0.84)
Predicted Effect probably null
Transcript: ENSMUST00000212394
AA Change: G133V

PolyPhen 2 Score 0.071 (Sensitivity: 0.94; Specificity: 0.84)
Meta Mutation Damage Score 0.1927 question?
Coding Region Coverage
  • 1x: 99.1%
  • 3x: 98.1%
  • 10x: 94.9%
  • 20x: 87.0%
Validation Efficiency 100% (40/40)
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene is a member of the ATPases Associated with diverse cellular Activities (AAA) superfamily. Members of this superfamily, found in all organisms, participate in a large number of cellular processes and contain the ATPase module consisting of an alpha-beta-alpha core domain and the Walker A and B motifs of the P-loop NTPases. Alternative splicing results in multiple transcript variants that encode different protein isoforms. [provided by RefSeq, Jul 2012]
Allele List at MGI
Other mutations in this stock
Total: 35 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4930433I11Rik A T 7: 40,642,480 (GRCm39) T141S probably benign Het
9230009I02Rik T C 11: 50,982,144 (GRCm39) noncoding transcript Het
Adamts13 G A 2: 26,896,336 (GRCm39) probably null Het
Chac1 C A 2: 119,183,950 (GRCm39) A184E probably damaging Het
Col11a1 G A 3: 113,932,414 (GRCm39) R113H unknown Het
Csmd1 T A 8: 16,240,040 (GRCm39) Y1124F probably damaging Het
Ctnnbl1 C T 2: 157,641,337 (GRCm39) probably benign Het
Dyrk4 T C 6: 126,854,296 (GRCm39) E499G possibly damaging Het
Fat1 T A 8: 45,471,074 (GRCm39) I1603N probably damaging Het
Fbn1 A T 2: 125,184,811 (GRCm39) C1660* probably null Het
Gapt G C 13: 110,490,273 (GRCm39) T130R probably damaging Het
Gm19684 A T 17: 36,432,792 (GRCm39) probably benign Het
Map4 A G 9: 109,808,037 (GRCm39) Y34C probably damaging Het
Mapk8 C T 14: 33,114,949 (GRCm39) R189H probably damaging Het
Mgst1 C T 6: 138,124,749 (GRCm39) T21M probably damaging Het
Msh2 A G 17: 87,987,480 (GRCm39) T207A probably benign Het
Mthfd2 A G 6: 83,290,376 (GRCm39) V85A probably damaging Het
Muc4 A G 16: 32,570,820 (GRCm39) S627G probably benign Het
Nbeal2 G A 9: 110,457,263 (GRCm39) T2266I probably damaging Het
Or51b6b T C 7: 103,309,735 (GRCm39) T241A probably damaging Het
Or7g16 T C 9: 18,727,002 (GRCm39) Y196C probably damaging Het
Or8d1 T C 9: 38,766,478 (GRCm39) V40A possibly damaging Het
Pcdhb2 G A 18: 37,428,710 (GRCm39) V228I possibly damaging Het
Pdcd6ip A T 9: 113,503,578 (GRCm39) probably benign Het
Piwil2 T C 14: 70,632,823 (GRCm39) D583G probably benign Het
Plin4 T A 17: 56,410,966 (GRCm39) M1022L probably benign Het
Rbm48 A G 5: 3,640,438 (GRCm39) S314P probably benign Het
Rbms3 A T 9: 117,458,860 (GRCm39) probably benign Het
Snx14 A T 9: 88,266,049 (GRCm39) S726T possibly damaging Het
Trim43c A T 9: 88,725,087 (GRCm39) H202L probably benign Het
Trip12 A G 1: 84,721,730 (GRCm39) F1334S probably damaging Het
Tyk2 T C 9: 21,027,463 (GRCm39) H503R probably benign Het
Ubr2 G A 17: 47,278,009 (GRCm39) Q745* probably null Het
Ush2a T A 1: 188,275,015 (GRCm39) Y1829* probably null Het
Vmn2r65 T A 7: 84,592,853 (GRCm39) E451D probably benign Het
Other mutations in Iqca1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00966:Iqca1 APN 1 89,973,379 (GRCm39) missense probably benign 0.10
IGL01367:Iqca1 APN 1 89,998,350 (GRCm39) splice site probably benign
IGL01545:Iqca1 APN 1 89,973,364 (GRCm39) missense probably benign
IGL01797:Iqca1 APN 1 90,072,541 (GRCm39) critical splice donor site probably null
IGL02098:Iqca1 APN 1 89,975,663 (GRCm39) missense probably damaging 0.96
IGL02194:Iqca1 APN 1 89,973,385 (GRCm39) missense probably benign 0.16
IGL03230:Iqca1 APN 1 90,072,724 (GRCm39) missense probably damaging 1.00
IGL03259:Iqca1 APN 1 89,980,156 (GRCm39) missense probably damaging 1.00
IGL03372:Iqca1 APN 1 90,072,691 (GRCm39) missense possibly damaging 0.80
R0383:Iqca1 UTSW 1 90,070,429 (GRCm39) missense probably damaging 1.00
R0610:Iqca1 UTSW 1 90,070,453 (GRCm39) missense probably null 0.97
R0685:Iqca1 UTSW 1 90,070,453 (GRCm39) missense probably null 0.97
R0798:Iqca1 UTSW 1 90,070,453 (GRCm39) missense probably null 0.97
R0799:Iqca1 UTSW 1 90,070,453 (GRCm39) missense probably null 0.97
R0800:Iqca1 UTSW 1 90,070,453 (GRCm39) missense probably null 0.97
R0801:Iqca1 UTSW 1 90,070,453 (GRCm39) missense probably null 0.97
R0825:Iqca1 UTSW 1 90,070,453 (GRCm39) missense probably null 0.97
R0826:Iqca1 UTSW 1 90,070,453 (GRCm39) missense probably null 0.97
R0827:Iqca1 UTSW 1 90,070,453 (GRCm39) missense probably null 0.97
R0863:Iqca1 UTSW 1 90,070,453 (GRCm39) missense probably null 0.97
R0864:Iqca1 UTSW 1 90,070,453 (GRCm39) missense probably null 0.97
R0960:Iqca1 UTSW 1 90,070,453 (GRCm39) missense probably null 0.97
R0961:Iqca1 UTSW 1 90,070,453 (GRCm39) missense probably null 0.97
R0962:Iqca1 UTSW 1 90,070,453 (GRCm39) missense probably null 0.97
R0963:Iqca1 UTSW 1 90,070,453 (GRCm39) missense probably null 0.97
R1101:Iqca1 UTSW 1 90,070,453 (GRCm39) missense probably null 0.97
R1344:Iqca1 UTSW 1 90,070,453 (GRCm39) missense probably null 0.97
R1523:Iqca1 UTSW 1 90,070,453 (GRCm39) missense probably null 0.97
R1646:Iqca1 UTSW 1 90,067,760 (GRCm39) missense probably damaging 0.98
R1682:Iqca1 UTSW 1 90,070,453 (GRCm39) missense probably null 0.97
R1742:Iqca1 UTSW 1 90,025,773 (GRCm39) missense probably benign 0.01
R1774:Iqca1 UTSW 1 90,008,625 (GRCm39) missense probably benign 0.02
R1775:Iqca1 UTSW 1 90,009,138 (GRCm39) missense probably damaging 1.00
R2011:Iqca1 UTSW 1 89,973,348 (GRCm39) missense probably benign 0.00
R2065:Iqca1 UTSW 1 90,057,953 (GRCm39) missense probably benign 0.01
R2156:Iqca1 UTSW 1 90,017,238 (GRCm39) missense possibly damaging 0.78
R2186:Iqca1 UTSW 1 90,009,066 (GRCm39) missense probably benign 0.06
R3872:Iqca1 UTSW 1 90,017,203 (GRCm39) missense probably damaging 1.00
R4308:Iqca1 UTSW 1 90,072,619 (GRCm39) missense probably damaging 1.00
R4578:Iqca1 UTSW 1 90,001,472 (GRCm39) missense probably damaging 0.98
R4737:Iqca1 UTSW 1 90,005,544 (GRCm39) missense probably damaging 0.99
R4867:Iqca1 UTSW 1 90,017,226 (GRCm39) missense probably benign 0.00
R4884:Iqca1 UTSW 1 90,067,759 (GRCm39) missense probably benign 0.10
R4887:Iqca1 UTSW 1 89,973,423 (GRCm39) missense probably damaging 1.00
R5352:Iqca1 UTSW 1 90,057,918 (GRCm39) missense probably benign 0.00
R5733:Iqca1 UTSW 1 89,998,257 (GRCm39) missense probably damaging 0.97
R5838:Iqca1 UTSW 1 90,072,667 (GRCm39) missense probably benign 0.22
R5951:Iqca1 UTSW 1 90,067,819 (GRCm39) splice site probably null
R5957:Iqca1 UTSW 1 90,008,670 (GRCm39) missense probably damaging 1.00
R6696:Iqca1 UTSW 1 90,057,922 (GRCm39) missense probably benign
R7240:Iqca1 UTSW 1 89,998,272 (GRCm39) missense possibly damaging 0.88
R7769:Iqca1 UTSW 1 90,005,532 (GRCm39) missense possibly damaging 0.82
R7841:Iqca1 UTSW 1 89,987,337 (GRCm39) missense
R8069:Iqca1 UTSW 1 89,973,466 (GRCm39) missense probably damaging 0.96
R8103:Iqca1 UTSW 1 89,987,330 (GRCm39) missense
R8932:Iqca1 UTSW 1 90,067,750 (GRCm39) missense probably damaging 1.00
R8963:Iqca1 UTSW 1 90,067,649 (GRCm39) missense probably benign 0.02
R9055:Iqca1 UTSW 1 89,998,335 (GRCm39) missense probably benign 0.02
R9168:Iqca1 UTSW 1 90,065,937 (GRCm39) missense probably damaging 0.98
R9342:Iqca1 UTSW 1 90,072,688 (GRCm39) missense probably damaging 0.99
R9647:Iqca1 UTSW 1 89,998,258 (GRCm39) missense probably benign 0.15
Z1176:Iqca1 UTSW 1 89,973,447 (GRCm39) missense probably benign 0.26
Predicted Primers PCR Primer
(F):5'- AGAGCCCAAACGTTCCTTAATCCTG -3'
(R):5'- TCTGAACTGACCTCCCAAGCTGAC -3'

Sequencing Primer
(F):5'- CTAGACCTCATAGAGCAAGCGTG -3'
(R):5'- ccacaaacacccttacccac -3'
Posted On 2013-11-08