Incidental Mutation 'R0865:Vmn2r25'
ID 82297
Institutional Source Beutler Lab
Gene Symbol Vmn2r25
Ensembl Gene ENSMUSG00000094672
Gene Name vomeronasal 2, receptor 25
Synonyms EG545874
MMRRC Submission 039039-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.119) question?
Stock # R0865 (G1)
Quality Score 225
Status Validated
Chromosome 6
Chromosomal Location 123799773-123830149 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to A at 123829976 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Arginine to Serine at position 58 (R58S)
Ref Sequence ENSEMBL: ENSMUSP00000124342 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000162046]
AlphaFold W4VSP2
Predicted Effect probably benign
Transcript: ENSMUST00000162046
AA Change: R58S

PolyPhen 2 Score 0.087 (Sensitivity: 0.93; Specificity: 0.85)
SMART Domains Protein: ENSMUSP00000124342
Gene: ENSMUSG00000094672
AA Change: R58S

DomainStartEndE-ValueType
signal peptide 1 22 N/A INTRINSIC
Pfam:ANF_receptor 82 473 6e-31 PFAM
Pfam:NCD3G 519 572 5.8e-25 PFAM
Pfam:7tm_3 603 840 4.8e-55 PFAM
Meta Mutation Damage Score 0.0898 question?
Coding Region Coverage
  • 1x: 99.6%
  • 3x: 99.0%
  • 10x: 97.5%
  • 20x: 95.2%
Validation Efficiency 98% (53/54)
Allele List at MGI
Other mutations in this stock
Total: 52 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Adck5 A G 15: 76,479,843 (GRCm39) E581G probably damaging Het
Adcy5 A G 16: 35,094,841 (GRCm39) N666S probably damaging Het
Apcs T C 1: 172,721,782 (GRCm39) D188G probably benign Het
Arih2 A G 9: 108,526,499 (GRCm39) probably benign Het
AU040320 A G 4: 126,742,677 (GRCm39) K981E possibly damaging Het
Brwd1 A T 16: 95,869,784 (GRCm39) I81K probably damaging Het
Cacng8 T A 7: 3,460,625 (GRCm39) I136N possibly damaging Het
Cdh22 A T 2: 165,022,976 (GRCm39) W32R probably damaging Het
Cel A G 2: 28,450,627 (GRCm39) S133P probably damaging Het
Clasp2 A G 9: 113,740,568 (GRCm39) T495A possibly damaging Het
Clock A T 5: 76,414,271 (GRCm39) probably benign Het
Cox6a2 A G 7: 127,804,995 (GRCm39) probably benign Het
Cyp2b19 C A 7: 26,461,654 (GRCm39) probably benign Het
Dnah11 G A 12: 118,154,579 (GRCm39) Q234* probably null Het
Gga3 A T 11: 115,483,285 (GRCm39) N91K probably damaging Het
Idh1 T C 1: 65,200,315 (GRCm39) T350A probably benign Het
Ints11 A G 4: 155,971,564 (GRCm39) probably null Het
Itgb1 A G 8: 129,436,732 (GRCm39) probably null Het
Kank4 A T 4: 98,662,900 (GRCm39) probably benign Het
Kansl1 A T 11: 104,315,194 (GRCm39) D281E probably benign Het
Kmt2a T C 9: 44,730,067 (GRCm39) probably benign Het
Kpna4 T C 3: 69,008,750 (GRCm39) E145G probably damaging Het
Lacc1 A G 14: 77,271,584 (GRCm39) I201T possibly damaging Het
Larp7 T C 3: 127,337,884 (GRCm39) K392E probably damaging Het
Lbh T A 17: 73,228,224 (GRCm39) M23K probably benign Het
Myo15a A T 11: 60,382,514 (GRCm39) E361V probably damaging Het
Ncor2 A G 5: 125,116,046 (GRCm39) S470P probably benign Het
Ngef T A 1: 87,412,323 (GRCm39) M449L probably benign Het
Odad1 A G 7: 45,591,512 (GRCm39) T259A probably benign Het
Or2w3 T C 11: 58,556,478 (GRCm39) I31T possibly damaging Het
Or7e178 T A 9: 20,226,045 (GRCm39) Y57F probably damaging Het
Peak1 A T 9: 56,165,116 (GRCm39) D937E probably benign Het
Pnpla7 A G 2: 24,872,135 (GRCm39) K72E probably benign Het
Ptprn T G 1: 75,224,782 (GRCm39) probably null Het
Scgn C T 13: 24,146,102 (GRCm39) probably null Het
Sdk2 T C 11: 113,741,748 (GRCm39) I824V probably benign Het
Slc38a3 A G 9: 107,532,847 (GRCm39) S326P probably damaging Het
Spen A G 4: 141,199,181 (GRCm39) S3126P probably benign Het
Tbcd T C 11: 121,493,815 (GRCm39) C902R possibly damaging Het
Tmem63b T C 17: 45,972,445 (GRCm39) I721V probably benign Het
Trim30c A G 7: 104,039,658 (GRCm39) S46P probably damaging Het
Trim59 T C 3: 68,944,941 (GRCm39) D133G probably damaging Het
Trpm7 A T 2: 126,641,159 (GRCm39) probably null Het
Ttll10 A G 4: 156,128,135 (GRCm39) L391P probably damaging Het
Ttn T C 2: 76,623,585 (GRCm39) T15331A possibly damaging Het
Vmn1r237 C T 17: 21,534,976 (GRCm39) T233I probably damaging Het
Vmn2r115 A T 17: 23,565,382 (GRCm39) D423V possibly damaging Het
Vmn2r71 A T 7: 85,268,516 (GRCm39) I240F probably benign Het
Wdr3 A G 3: 100,060,112 (GRCm39) probably benign Het
Zc3h14 T C 12: 98,745,528 (GRCm39) probably null Het
Zc3hav1 C T 6: 38,330,837 (GRCm39) probably benign Het
Zfp335 A T 2: 164,741,415 (GRCm39) probably null Het
Other mutations in Vmn2r25
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00087:Vmn2r25 APN 6 123,830,130 (GRCm39) missense probably benign 0.25
IGL01781:Vmn2r25 APN 6 123,816,324 (GRCm39) missense possibly damaging 0.48
IGL01843:Vmn2r25 APN 6 123,829,962 (GRCm39) missense possibly damaging 0.67
IGL02023:Vmn2r25 APN 6 123,816,388 (GRCm39) missense probably damaging 0.96
IGL02502:Vmn2r25 APN 6 123,816,392 (GRCm39) missense probably damaging 0.96
IGL02709:Vmn2r25 APN 6 123,816,723 (GRCm39) missense possibly damaging 0.50
IGL03053:Vmn2r25 APN 6 123,800,077 (GRCm39) missense probably damaging 1.00
PIT4468001:Vmn2r25 UTSW 6 123,816,557 (GRCm39) missense probably benign 0.00
PIT4812001:Vmn2r25 UTSW 6 123,800,447 (GRCm39) missense probably damaging 1.00
R0054:Vmn2r25 UTSW 6 123,829,984 (GRCm39) missense probably benign 0.00
R0312:Vmn2r25 UTSW 6 123,805,539 (GRCm39) splice site probably benign
R0366:Vmn2r25 UTSW 6 123,800,581 (GRCm39) nonsense probably null
R0390:Vmn2r25 UTSW 6 123,800,140 (GRCm39) missense probably damaging 1.00
R0466:Vmn2r25 UTSW 6 123,829,008 (GRCm39) missense probably benign 0.16
R0541:Vmn2r25 UTSW 6 123,816,786 (GRCm39) missense probably damaging 0.97
R0612:Vmn2r25 UTSW 6 123,816,481 (GRCm39) missense probably damaging 1.00
R1219:Vmn2r25 UTSW 6 123,816,282 (GRCm39) missense probably benign 0.00
R1240:Vmn2r25 UTSW 6 123,828,864 (GRCm39) missense probably damaging 0.98
R1701:Vmn2r25 UTSW 6 123,828,754 (GRCm39) splice site probably null
R1780:Vmn2r25 UTSW 6 123,805,424 (GRCm39) missense probably damaging 1.00
R1809:Vmn2r25 UTSW 6 123,802,337 (GRCm39) missense probably benign 0.00
R1833:Vmn2r25 UTSW 6 123,816,643 (GRCm39) missense probably benign 0.01
R1964:Vmn2r25 UTSW 6 123,800,254 (GRCm39) missense possibly damaging 0.94
R2154:Vmn2r25 UTSW 6 123,816,805 (GRCm39) missense probably benign 0.01
R2164:Vmn2r25 UTSW 6 123,816,518 (GRCm39) missense possibly damaging 0.96
R3799:Vmn2r25 UTSW 6 123,830,143 (GRCm39) missense probably benign 0.12
R3836:Vmn2r25 UTSW 6 123,830,044 (GRCm39) missense probably damaging 1.00
R3946:Vmn2r25 UTSW 6 123,817,057 (GRCm39) missense probably damaging 0.97
R4282:Vmn2r25 UTSW 6 123,800,606 (GRCm39) missense probably damaging 1.00
R4367:Vmn2r25 UTSW 6 123,805,496 (GRCm39) missense probably damaging 1.00
R4438:Vmn2r25 UTSW 6 123,816,756 (GRCm39) missense probably benign 0.03
R4488:Vmn2r25 UTSW 6 123,799,819 (GRCm39) missense probably damaging 1.00
R4580:Vmn2r25 UTSW 6 123,799,982 (GRCm39) missense possibly damaging 0.46
R4631:Vmn2r25 UTSW 6 123,829,962 (GRCm39) missense possibly damaging 0.94
R4765:Vmn2r25 UTSW 6 123,800,182 (GRCm39) missense probably damaging 1.00
R4908:Vmn2r25 UTSW 6 123,805,406 (GRCm39) missense probably benign
R5207:Vmn2r25 UTSW 6 123,817,062 (GRCm39) missense probably damaging 1.00
R5254:Vmn2r25 UTSW 6 123,802,277 (GRCm39) missense probably damaging 1.00
R5444:Vmn2r25 UTSW 6 123,805,451 (GRCm39) missense probably benign 0.00
R5586:Vmn2r25 UTSW 6 123,802,255 (GRCm39) missense probably damaging 1.00
R5607:Vmn2r25 UTSW 6 123,805,318 (GRCm39) missense possibly damaging 0.49
R5985:Vmn2r25 UTSW 6 123,800,587 (GRCm39) missense probably benign
R6046:Vmn2r25 UTSW 6 123,799,876 (GRCm39) missense probably damaging 1.00
R6057:Vmn2r25 UTSW 6 123,799,900 (GRCm39) missense possibly damaging 0.69
R6569:Vmn2r25 UTSW 6 123,828,941 (GRCm39) missense probably benign 0.01
R6826:Vmn2r25 UTSW 6 123,800,071 (GRCm39) missense probably damaging 1.00
R7054:Vmn2r25 UTSW 6 123,800,569 (GRCm39) missense probably damaging 1.00
R7120:Vmn2r25 UTSW 6 123,805,394 (GRCm39) missense possibly damaging 0.51
R7177:Vmn2r25 UTSW 6 123,816,882 (GRCm39) missense possibly damaging 0.94
R7287:Vmn2r25 UTSW 6 123,829,040 (GRCm39) missense possibly damaging 0.49
R7397:Vmn2r25 UTSW 6 123,800,498 (GRCm39) missense probably damaging 0.96
R7486:Vmn2r25 UTSW 6 123,800,101 (GRCm39) missense probably damaging 1.00
R7699:Vmn2r25 UTSW 6 123,816,882 (GRCm39) missense possibly damaging 0.94
R7700:Vmn2r25 UTSW 6 123,816,882 (GRCm39) missense possibly damaging 0.94
R7759:Vmn2r25 UTSW 6 123,800,339 (GRCm39) missense probably damaging 0.99
R7802:Vmn2r25 UTSW 6 123,828,791 (GRCm39) missense possibly damaging 0.88
R7850:Vmn2r25 UTSW 6 123,805,431 (GRCm39) missense probably damaging 1.00
R8064:Vmn2r25 UTSW 6 123,800,581 (GRCm39) nonsense probably null
R8170:Vmn2r25 UTSW 6 123,829,976 (GRCm39) missense probably benign 0.09
R8340:Vmn2r25 UTSW 6 123,829,972 (GRCm39) missense probably benign 0.01
R8346:Vmn2r25 UTSW 6 123,802,350 (GRCm39) missense probably benign 0.00
R8395:Vmn2r25 UTSW 6 123,799,982 (GRCm39) missense possibly damaging 0.81
R8889:Vmn2r25 UTSW 6 123,800,569 (GRCm39) missense probably damaging 1.00
R9094:Vmn2r25 UTSW 6 123,805,391 (GRCm39) missense probably benign 0.44
R9204:Vmn2r25 UTSW 6 123,830,092 (GRCm39) missense probably benign 0.00
R9253:Vmn2r25 UTSW 6 123,816,960 (GRCm39) missense probably damaging 0.98
R9392:Vmn2r25 UTSW 6 123,816,937 (GRCm39) missense probably benign
R9520:Vmn2r25 UTSW 6 123,830,066 (GRCm39) nonsense probably null
R9525:Vmn2r25 UTSW 6 123,800,164 (GRCm39) missense probably damaging 1.00
R9622:Vmn2r25 UTSW 6 123,816,579 (GRCm39) missense probably damaging 0.99
X0020:Vmn2r25 UTSW 6 123,816,359 (GRCm39) missense possibly damaging 0.95
Z1176:Vmn2r25 UTSW 6 123,799,856 (GRCm39) missense probably damaging 1.00
Predicted Primers
Posted On 2013-11-08