Incidental Mutation 'R0856:Or2a52'
| ID |
82715 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Or2a52
|
| Ensembl Gene |
ENSMUSG00000071481 |
| Gene Name |
olfactory receptor family 2 subfamily A member 52 |
| Synonyms |
Olfr437, GA_x6K02T2P3E9-4391088-4390156, MOR261-11 |
| MMRRC Submission |
039035-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.129)
|
| Stock # |
R0856 (G1)
|
| Quality Score |
225 |
|
Status
|
Not validated
|
| Chromosome |
6 |
| Chromosomal Location |
43143994-43144926 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
T to C
at 43144345 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Serine to Proline
at position 118
(S118P)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000145490
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000060243]
[ENSMUST00000205175]
[ENSMUST00000216179]
|
| AlphaFold |
Q8VEV1 |
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000060243
AA Change: S118P
PolyPhen 2
Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
|
| SMART Domains |
Protein: ENSMUSP00000058147
Gene: ENSMUSG00000071481
AA Change: S118P
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
30 |
307 |
7.5e-60 |
PFAM |
|
Pfam:7tm_1
|
40 |
289 |
3e-27 |
PFAM |
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000205175
AA Change: S118P
PolyPhen 2
Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
|
| SMART Domains |
Protein: ENSMUSP00000145490
Gene: ENSMUSG00000071481
AA Change: S118P
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
30 |
307 |
7.5e-60 |
PFAM |
|
Pfam:7tm_1
|
40 |
289 |
3e-27 |
PFAM |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000216179
|
| Coding Region Coverage |
- 1x: 99.3%
- 3x: 98.7%
- 10x: 96.9%
- 20x: 93.6%
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 23 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Abcb11 |
A |
T |
2: 69,154,262 (GRCm39) |
S101R |
probably benign |
Het |
| Arhgap32 |
C |
A |
9: 32,171,516 (GRCm39) |
P1432Q |
probably damaging |
Het |
| Atp7b |
A |
G |
8: 22,487,647 (GRCm39) |
V1134A |
probably damaging |
Het |
| Crtc3 |
A |
T |
7: 80,245,372 (GRCm39) |
Y418N |
probably damaging |
Het |
| Cts8 |
A |
T |
13: 61,398,730 (GRCm39) |
Y259N |
probably damaging |
Het |
| Defb39 |
T |
A |
8: 19,102,982 (GRCm39) |
T38S |
possibly damaging |
Het |
| Depdc7 |
A |
G |
2: 104,558,437 (GRCm39) |
S195P |
probably benign |
Het |
| Gykl1 |
T |
A |
18: 52,828,441 (GRCm39) |
*550K |
probably null |
Het |
| Kcnip4 |
A |
G |
5: 48,576,552 (GRCm39) |
|
probably null |
Het |
| Kif20a |
T |
C |
18: 34,764,271 (GRCm39) |
S666P |
probably benign |
Het |
| Klhl32 |
T |
C |
4: 24,682,092 (GRCm39) |
D197G |
probably damaging |
Het |
| Men1 |
A |
G |
19: 6,385,888 (GRCm39) |
Y133C |
probably damaging |
Het |
| Mtnr1a |
A |
G |
8: 45,540,870 (GRCm39) |
E277G |
possibly damaging |
Het |
| Numa1 |
C |
A |
7: 101,648,155 (GRCm39) |
Q629K |
probably damaging |
Het |
| P3h3 |
G |
T |
6: 124,831,896 (GRCm39) |
D296E |
probably benign |
Het |
| Prl7c1 |
A |
G |
13: 27,957,717 (GRCm39) |
I241T |
possibly damaging |
Het |
| Prr35 |
T |
C |
17: 26,167,001 (GRCm39) |
S179G |
probably benign |
Het |
| Rp1 |
T |
C |
1: 4,414,878 (GRCm39) |
E2078G |
probably benign |
Het |
| Septin8 |
A |
G |
11: 53,428,697 (GRCm39) |
H414R |
probably benign |
Het |
| Tbx20 |
A |
G |
9: 24,636,908 (GRCm39) |
M393T |
probably benign |
Het |
| Upf2 |
A |
G |
2: 5,962,463 (GRCm39) |
D55G |
unknown |
Het |
| Vit |
G |
T |
17: 78,927,086 (GRCm39) |
V344L |
possibly damaging |
Het |
| Vps26a |
A |
C |
10: 62,304,189 (GRCm39) |
V176G |
possibly damaging |
Het |
|
| Other mutations in Or2a52 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01356:Or2a52
|
APN |
6 |
43,144,324 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL01618:Or2a52
|
APN |
6 |
43,144,637 (GRCm39) |
missense |
probably damaging |
0.97 |
|
IGL02426:Or2a52
|
APN |
6 |
43,144,022 (GRCm39) |
missense |
probably benign |
0.02 |
|
R0548:Or2a52
|
UTSW |
6 |
43,144,121 (GRCm39) |
missense |
probably benign |
0.43 |
|
R1590:Or2a52
|
UTSW |
6 |
43,144,846 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1902:Or2a52
|
UTSW |
6 |
43,144,657 (GRCm39) |
splice site |
probably null |
|
|
R3894:Or2a52
|
UTSW |
6 |
43,144,192 (GRCm39) |
missense |
probably benign |
0.23 |
|
R5083:Or2a52
|
UTSW |
6 |
43,144,273 (GRCm39) |
missense |
probably benign |
0.33 |
|
R5278:Or2a52
|
UTSW |
6 |
43,144,655 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6246:Or2a52
|
UTSW |
6 |
43,144,436 (GRCm39) |
splice site |
probably null |
|
|
R6781:Or2a52
|
UTSW |
6 |
43,144,322 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6807:Or2a52
|
UTSW |
6 |
43,144,172 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7253:Or2a52
|
UTSW |
6 |
43,144,744 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8445:Or2a52
|
UTSW |
6 |
43,144,231 (GRCm39) |
missense |
probably benign |
0.36 |
|
R8891:Or2a52
|
UTSW |
6 |
43,144,750 (GRCm39) |
missense |
probably benign |
0.05 |
|
R9089:Or2a52
|
UTSW |
6 |
43,144,917 (GRCm39) |
missense |
probably benign |
0.03 |
|
R9529:Or2a52
|
UTSW |
6 |
43,144,432 (GRCm39) |
missense |
possibly damaging |
0.69 |
|
R9695:Or2a52
|
UTSW |
6 |
43,144,510 (GRCm39) |
missense |
probably benign |
0.03 |
|
| Predicted Primers |
PCR Primer
(F):5'- TTAGTAGTCATCTGCCTGGACCCC -3'
(R):5'- AGCTTGAGAACAGCCAGGATTTCAC -3'
Sequencing Primer
(F):5'- TGGACCCCAAGCTGCAC -3'
(R):5'- CACAGAAGAGGTGGTTTATTTCC -3'
|
| Posted On |
2013-11-08 |
Incidental Mutation