Incidental Mutation 'R0899:Mrpl52'
ID 83812
Institutional Source Beutler Lab
Gene Symbol Mrpl52
Ensembl Gene ENSMUSG00000010406
Gene Name mitochondrial ribosomal protein L52
Synonyms 1110047B07Rik
MMRRC Submission 039059-MU
Accession Numbers
Essential gene? Not available question?
Stock # R0899 (G1)
Quality Score 151
Status Not validated
Chromosome 14
Chromosomal Location 54664366-54667207 bp(+) (GRCm39)
Type of Mutation nonsense
DNA Base Change (assembly) C to T at 54664541 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Arginine to Stop codon at position 12 (R12*)
Ref Sequence ENSEMBL: ENSMUSP00000142643 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000010550] [ENSMUST00000089688] [ENSMUST00000196273] [ENSMUST00000197874] [ENSMUST00000199195] [ENSMUST00000225641]
AlphaFold Q9D0Y8
Predicted Effect probably null
Transcript: ENSMUST00000010550
AA Change: R27*
Predicted Effect probably benign
Transcript: ENSMUST00000089688
SMART Domains Protein: ENSMUSP00000087119
Gene: ENSMUSG00000000957

DomainStartEndE-ValueType
signal peptide 1 23 N/A INTRINSIC
Pfam:PG_binding_1 36 88 2.1e-12 PFAM
ZnMc 115 285 6.01e-58 SMART
HX 323 366 3.97e-9 SMART
HX 368 412 1.42e-10 SMART
HX 415 461 4.45e-12 SMART
HX 463 508 1.61e-9 SMART
Pfam:DUF3377 512 582 2.2e-27 PFAM
Predicted Effect probably null
Transcript: ENSMUST00000196273
AA Change: R12*
Predicted Effect probably benign
Transcript: ENSMUST00000197874
Predicted Effect noncoding transcript
Transcript: ENSMUST00000197947
Predicted Effect noncoding transcript
Transcript: ENSMUST00000198679
Predicted Effect noncoding transcript
Transcript: ENSMUST00000199153
Predicted Effect noncoding transcript
Transcript: ENSMUST00000200217
Predicted Effect noncoding transcript
Transcript: ENSMUST00000199689
Predicted Effect probably benign
Transcript: ENSMUST00000199195
Predicted Effect probably benign
Transcript: ENSMUST00000225641
Predicted Effect noncoding transcript
Transcript: ENSMUST00000228871
Coding Region Coverage
  • 1x: 99.7%
  • 3x: 99.0%
  • 10x: 97.2%
  • 20x: 93.6%
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] Mammalian mitochondrial ribosomal proteins are encoded by nuclear genes and help in protein synthesis within the mitochondrion. Mitochondrial ribosomes (mitoribosomes) consist of a small 28S subunit and a large 39S subunit. They have an estimated 75% protein to rRNA composition compared to prokaryotic ribosomes, where this ratio is reversed. Another difference between mammalian mitoribosomes and prokaryotic ribosomes is that the latter contain a 5S rRNA. Among different species, the proteins comprising the mitoribosome differ greatly in sequence, and sometimes in biochemical properties, which prevents easy recognition by sequence homology. This gene encodes a 39S subunit protein which has no bacterial homolog. Multiple transcript variants encoding different protein isoforms were identified through sequence analysis. [provided by RefSeq, Jul 2008]
Allele List at MGI
Other mutations in this stock
Total: 38 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
5031439G07Rik T C 15: 84,833,459 (GRCm39) K442E probably damaging Het
Adamts1 G A 16: 85,594,940 (GRCm39) R340* probably null Het
Afg3l2 T C 18: 67,556,047 (GRCm39) N428S possibly damaging Het
Aqp12 G A 1: 92,934,332 (GRCm39) D70N probably damaging Het
Astn1 T A 1: 158,338,679 (GRCm39) C475* probably null Het
Atp2b1 G A 10: 98,852,893 (GRCm39) probably null Het
Cbln2 T C 18: 86,734,877 (GRCm39) S217P possibly damaging Het
Ces2h T C 8: 105,741,182 (GRCm39) L58P probably damaging Het
Cfap43 C T 19: 47,736,433 (GRCm39) G1353R possibly damaging Het
Crcp A G 5: 130,088,672 (GRCm39) M91V probably benign Het
Cubn A G 2: 13,367,139 (GRCm39) V1577A possibly damaging Het
Dthd1 A G 5: 63,000,271 (GRCm39) H531R probably benign Het
Fam120a G T 13: 49,039,219 (GRCm39) A979E possibly damaging Het
Fam3d A G 14: 8,364,863 (GRCm38) I16T probably damaging Het
Fat2 C T 11: 55,147,051 (GRCm39) G3982S probably damaging Het
Fbxo44 C G 4: 148,240,726 (GRCm39) R220S probably damaging Het
Fcnb T A 2: 27,966,791 (GRCm39) K247N probably damaging Het
Gtf2a1l A G 17: 88,976,152 (GRCm39) N5S Het
Htr3a T A 9: 48,812,752 (GRCm39) D229V possibly damaging Het
Ipo11 A C 13: 107,037,324 (GRCm39) L173* probably null Het
Jam3 C A 9: 27,010,253 (GRCm39) G244W probably damaging Het
Lypd11 C T 7: 24,422,737 (GRCm39) R112H probably benign Het
Myo15a A G 11: 60,368,011 (GRCm39) Y257C possibly damaging Het
Myocd G A 11: 65,086,018 (GRCm39) P215L possibly damaging Het
Ndst1 T C 18: 60,840,954 (GRCm39) T243A probably benign Het
Obox5 A T 7: 15,492,800 (GRCm39) T252S probably benign Het
Or5m13b A G 2: 85,753,731 (GRCm39) T40A probably benign Het
Or6c75 T C 10: 129,337,301 (GRCm39) F183L probably damaging Het
Or7g34 A C 9: 19,477,843 (GRCm39) V276G probably damaging Het
Osbpl1a T C 18: 12,890,747 (GRCm39) S377G possibly damaging Het
Pfkl A G 10: 77,841,273 (GRCm39) probably null Het
Prdm16 A T 4: 154,613,366 (GRCm39) N20K probably damaging Het
Prkd1 A G 12: 50,431,976 (GRCm39) I589T probably damaging Het
Scnn1b G A 7: 121,516,938 (GRCm39) G525S probably damaging Het
Tktl2 G A 8: 66,964,999 (GRCm39) V186M probably damaging Het
Ttn A G 2: 76,718,329 (GRCm39) probably benign Het
Wap T C 11: 6,586,725 (GRCm39) T125A probably benign Het
Wdr86 C T 5: 24,923,005 (GRCm39) R229Q probably benign Het
Other mutations in Mrpl52
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00959:Mrpl52 APN 14 54,664,494 (GRCm39) missense possibly damaging 0.63
IGL01335:Mrpl52 APN 14 54,664,656 (GRCm39) missense probably damaging 1.00
R1927:Mrpl52 UTSW 14 54,664,414 (GRCm39) missense possibly damaging 0.60
R5653:Mrpl52 UTSW 14 54,664,686 (GRCm39) missense probably damaging 0.99
Predicted Primers PCR Primer
(F):5'- GGCAGTTCCTCCTGTTCAGAACAC -3'
(R):5'- AGGTTCACTATTTTCCCAGACACGC -3'

Sequencing Primer
(F):5'- CACATTCAAGATGTCGGCTTC -3'
(R):5'- TTACCCCGGTGGTCTCG -3'
Posted On 2013-11-08