Incidental Mutation 'IGL01446:Vmn1r236'
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ID84428
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Vmn1r236
Ensembl Gene ENSMUSG00000054142
Gene Namevomeronasal 1 receptor 236
SynonymsV1rf4
Accession Numbers
Is this an essential gene? Probably non essential (E-score: 0.080) question?
Stock #IGL01446
Quality Score
Status
Chromosome17
Chromosomal Location21286533-21287653 bp(+) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) T to A at 21286656 bp
ZygosityHeterozygous
Amino Acid Change Valine to Aspartic acid at position 12 (V12D)
Ref Sequence ENSEMBL: ENSMUSP00000064103 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000066998]
Predicted Effect probably benign
Transcript: ENSMUST00000066998
AA Change: V12D

PolyPhen 2 Score 0.005 (Sensitivity: 0.97; Specificity: 0.74)
SMART Domains Protein: ENSMUSP00000064103
Gene: ENSMUSG00000054142
AA Change: V12D

DomainStartEndE-ValueType
Pfam:TAS2R 31 333 1.9e-10 PFAM
Pfam:V1R 64 329 1.1e-31 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000102183
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 41 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abca13 A G 11: 9,403,834 T3719A probably damaging Het
Acaca A G 11: 84,260,631 K785R probably damaging Het
Acsm3 G A 7: 119,778,454 V401M probably damaging Het
Aff4 G T 11: 53,415,469 R1146L probably damaging Het
Alms1 C A 6: 85,696,701 P3562T probably damaging Het
Arsj A G 3: 126,438,814 E403G probably benign Het
Baiap2l1 C T 5: 144,275,913 V431I probably benign Het
Cecr2 T A 6: 120,758,599 M904K probably benign Het
Cenpe A T 3: 135,237,539 T775S probably benign Het
Dennd1b G A 1: 139,023,110 E30K possibly damaging Het
Dnah5 A G 15: 28,326,669 D2008G probably damaging Het
Dnm2 T C 9: 21,481,376 V460A probably damaging Het
Ell2 G T 13: 75,761,991 L285F probably benign Het
Erg A G 16: 95,361,282 S322P probably damaging Het
Extl3 A G 14: 65,077,080 F218L probably benign Het
Fam84a A T 12: 14,149,928 I266N probably damaging Het
Fzd9 T C 5: 135,250,566 E155G probably damaging Het
Ghr A G 15: 3,333,355 W212R probably damaging Het
Gulp1 A G 1: 44,744,548 probably benign Het
Hdgfl2 C T 17: 56,097,281 R332C possibly damaging Het
Nsd2 T C 5: 33,861,186 probably benign Het
Olfr1259 A G 2: 89,943,938 F59S probably damaging Het
Olfr1441 T C 19: 12,422,801 I164T possibly damaging Het
Olfr1480 C T 19: 13,530,252 T237I probably benign Het
Phf11b A C 14: 59,341,291 S9A probably benign Het
Psd4 T C 2: 24,405,395 S854P probably damaging Het
Reln C T 5: 21,969,317 D1963N probably damaging Het
Rpe65 T A 3: 159,600,405 probably benign Het
Sdccag8 T C 1: 176,845,245 S235P probably damaging Het
Sgip1 G T 4: 102,928,913 probably null Het
Skint5 G A 4: 113,942,822 P36L probably damaging Het
Slc26a3 G T 12: 31,452,491 probably benign Het
Snx13 T A 12: 35,124,480 C669* probably null Het
Svil A T 18: 5,062,385 T902S probably damaging Het
Syne2 T C 12: 76,041,375 S4989P probably damaging Het
Ttn G A 2: 76,809,939 T13775M probably damaging Het
Ubr4 T C 4: 139,438,040 probably benign Het
Ush1c C T 7: 46,208,956 R636H possibly damaging Het
Usp17lc A T 7: 103,418,444 R315S probably benign Het
Wsb2 T G 5: 117,371,164 I170S probably damaging Het
Zfp800 G A 6: 28,242,984 L661F possibly damaging Het
Other mutations in Vmn1r236
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01953:Vmn1r236 APN 17 21287211 missense possibly damaging 0.94
IGL02252:Vmn1r236 APN 17 21286839 missense probably benign 0.41
IGL03030:Vmn1r236 APN 17 21286846 nonsense probably null
IGL03117:Vmn1r236 APN 17 21287246 missense probably benign 0.17
IGL03342:Vmn1r236 APN 17 21286974 missense probably benign 0.37
R0569:Vmn1r236 UTSW 17 21286910 missense probably benign 0.05
R1747:Vmn1r236 UTSW 17 21286917 missense probably benign 0.31
R1872:Vmn1r236 UTSW 17 21287411 missense possibly damaging 0.77
R1876:Vmn1r236 UTSW 17 21286638 missense probably benign
R3692:Vmn1r236 UTSW 17 21286806 missense probably benign 0.09
R4822:Vmn1r236 UTSW 17 21286940 missense probably damaging 0.99
R6918:Vmn1r236 UTSW 17 21287616 missense probably benign 0.37
R7089:Vmn1r236 UTSW 17 21286942 missense possibly damaging 0.84
R7895:Vmn1r236 UTSW 17 21287466 missense possibly damaging 0.61
R7965:Vmn1r236 UTSW 17 21287434 nonsense probably null
Posted On2013-11-11