Incidental Mutation 'IGL01451:Treml4'
ID |
84651 |
Institutional Source |
Australian Phenomics Network
(link to record)
|
Gene Symbol |
Treml4
|
Ensembl Gene |
ENSMUSG00000051682 |
Gene Name |
triggering receptor expressed on myeloid cells-like 4 |
Synonyms |
5031403H21Rik |
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.099)
|
Stock # |
IGL01451
|
Quality Score |
|
Status
|
|
Chromosome |
17 |
Chromosomal Location |
48571323-48582388 bp(+) (GRCm39) |
Type of Mutation |
splice site |
DNA Base Change (assembly) |
T to C
at 48572023 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
|
Ref Sequence |
ENSEMBL: ENSMUSP00000118772
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000059873]
[ENSMUST00000125426]
[ENSMUST00000136272]
[ENSMUST00000153420]
[ENSMUST00000154335]
|
AlphaFold |
Q3LRV9 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000059873
|
SMART Domains |
Protein: ENSMUSP00000054121 Gene: ENSMUSG00000051682
Domain | Start | End | E-Value | Type |
low complexity region
|
7 |
18 |
N/A |
INTRINSIC |
IG
|
32 |
137 |
6.51e-3 |
SMART |
transmembrane domain
|
200 |
222 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000125426
|
SMART Domains |
Protein: ENSMUSP00000119177 Gene: ENSMUSG00000051682
Domain | Start | End | E-Value | Type |
low complexity region
|
7 |
18 |
N/A |
INTRINSIC |
IG
|
28 |
133 |
6.51e-3 |
SMART |
transmembrane domain
|
196 |
218 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000136272
|
SMART Domains |
Protein: ENSMUSP00000120550 Gene: ENSMUSG00000051682
Domain | Start | End | E-Value | Type |
low complexity region
|
7 |
18 |
N/A |
INTRINSIC |
IG
|
32 |
137 |
6.51e-3 |
SMART |
transmembrane domain
|
192 |
214 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000153420
|
SMART Domains |
Protein: ENSMUSP00000115290 Gene: ENSMUSG00000051682
Domain | Start | End | E-Value | Type |
low complexity region
|
7 |
18 |
N/A |
INTRINSIC |
IG
|
32 |
137 |
6.51e-3 |
SMART |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000154335
|
SMART Domains |
Protein: ENSMUSP00000118772 Gene: ENSMUSG00000051682
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
28 |
N/A |
INTRINSIC |
IG
|
32 |
137 |
6.51e-3 |
SMART |
transmembrane domain
|
201 |
223 |
N/A |
INTRINSIC |
|
Coding Region Coverage |
|
Validation Efficiency |
|
MGI Phenotype |
PHENOTYPE: Mice homozygous for a knock-out allele do not exhibit any significant alterations in the uptake and cross-presentation of dying cells. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 28 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
1700003H04Rik |
A |
G |
3: 124,373,527 (GRCm39) |
S23P |
possibly damaging |
Het |
Adam1a |
T |
C |
5: 121,657,439 (GRCm39) |
Y618C |
probably benign |
Het |
Amigo2 |
A |
C |
15: 97,143,107 (GRCm39) |
S438R |
probably benign |
Het |
Atp5me |
T |
C |
5: 108,581,922 (GRCm39) |
I21V |
probably benign |
Het |
Dnah2 |
T |
C |
11: 69,365,017 (GRCm39) |
|
probably benign |
Het |
Dock2 |
A |
G |
11: 34,260,390 (GRCm39) |
Y984H |
probably damaging |
Het |
Dpysl2 |
T |
A |
14: 67,045,367 (GRCm39) |
I469F |
possibly damaging |
Het |
Edem3 |
C |
T |
1: 151,694,379 (GRCm39) |
T886I |
probably benign |
Het |
Gart |
T |
C |
16: 91,422,400 (GRCm39) |
T706A |
probably benign |
Het |
Gfpt2 |
A |
T |
11: 49,698,517 (GRCm39) |
|
probably benign |
Het |
Gm11541 |
T |
G |
11: 94,586,495 (GRCm39) |
D84A |
unknown |
Het |
Gne |
T |
C |
4: 44,041,860 (GRCm39) |
|
probably null |
Het |
Gria4 |
A |
T |
9: 4,503,652 (GRCm39) |
D321E |
probably benign |
Het |
Ift122 |
T |
G |
6: 115,889,565 (GRCm39) |
|
probably null |
Het |
Lcp2 |
A |
T |
11: 33,997,345 (GRCm39) |
|
probably benign |
Het |
Mcm2 |
C |
T |
6: 88,868,948 (GRCm39) |
|
probably benign |
Het |
Or8b54 |
A |
G |
9: 38,687,225 (GRCm39) |
I225V |
probably benign |
Het |
Ptpru |
C |
A |
4: 131,496,803 (GRCm39) |
|
probably benign |
Het |
Rpap2 |
T |
C |
5: 107,751,492 (GRCm39) |
|
probably null |
Het |
Slc25a39 |
T |
C |
11: 102,295,726 (GRCm39) |
T138A |
probably damaging |
Het |
St6galnac1 |
A |
C |
11: 116,660,165 (GRCm39) |
S49R |
probably benign |
Het |
Stat1 |
T |
C |
1: 52,178,502 (GRCm39) |
L312P |
probably damaging |
Het |
Tmem198 |
T |
C |
1: 75,461,014 (GRCm39) |
|
probably benign |
Het |
Top2a |
A |
T |
11: 98,901,856 (GRCm39) |
L458Q |
probably damaging |
Het |
Trpm6 |
A |
G |
19: 18,786,933 (GRCm39) |
D503G |
probably damaging |
Het |
Ttn |
C |
A |
2: 76,775,617 (GRCm39) |
E1854D |
unknown |
Het |
Ubqln3 |
A |
T |
7: 103,791,403 (GRCm39) |
M229K |
possibly damaging |
Het |
Zfyve9 |
T |
C |
4: 108,539,457 (GRCm39) |
T939A |
probably damaging |
Het |
|
Other mutations in Treml4 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01407:Treml4
|
APN |
17 |
48,571,877 (GRCm39) |
missense |
possibly damaging |
0.82 |
IGL01787:Treml4
|
APN |
17 |
48,571,732 (GRCm39) |
missense |
probably damaging |
1.00 |
R0027:Treml4
|
UTSW |
17 |
48,571,962 (GRCm39) |
missense |
possibly damaging |
0.82 |
R1975:Treml4
|
UTSW |
17 |
48,579,821 (GRCm39) |
missense |
probably damaging |
1.00 |
R4013:Treml4
|
UTSW |
17 |
48,571,837 (GRCm39) |
missense |
probably benign |
0.09 |
R4327:Treml4
|
UTSW |
17 |
48,581,417 (GRCm39) |
missense |
probably damaging |
0.98 |
R5586:Treml4
|
UTSW |
17 |
48,571,927 (GRCm39) |
missense |
probably damaging |
1.00 |
R6220:Treml4
|
UTSW |
17 |
48,571,876 (GRCm39) |
missense |
possibly damaging |
0.91 |
R6510:Treml4
|
UTSW |
17 |
48,581,472 (GRCm39) |
missense |
probably benign |
|
R6964:Treml4
|
UTSW |
17 |
48,579,847 (GRCm39) |
critical splice donor site |
probably null |
|
R8136:Treml4
|
UTSW |
17 |
48,571,745 (GRCm39) |
nonsense |
probably null |
|
R8289:Treml4
|
UTSW |
17 |
48,581,456 (GRCm39) |
missense |
probably benign |
0.23 |
R9070:Treml4
|
UTSW |
17 |
48,576,781 (GRCm39) |
missense |
probably damaging |
1.00 |
R9574:Treml4
|
UTSW |
17 |
48,571,672 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Posted On |
2013-11-11 |