Incidental Mutation 'IGL01451:Tmem198'
ID |
84652 |
Institutional Source |
Australian Phenomics Network
(link to record)
|
Gene Symbol |
Tmem198
|
Ensembl Gene |
ENSMUSG00000051703 |
Gene Name |
transmembrane protein 198 |
Synonyms |
A230078I05Rik, Tmem198-1, Tmem198a |
Accession Numbers |
|
Essential gene? |
Possibly non essential
(E-score: 0.439)
|
Stock # |
IGL01451
|
Quality Score |
|
Status
|
|
Chromosome |
1 |
Chromosomal Location |
75456176-75462349 bp(+) (GRCm39) |
Type of Mutation |
unclassified |
DNA Base Change (assembly) |
T to C
at 75461014 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
|
Ref Sequence |
ENSEMBL: ENSMUSP00000140795
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000050899]
[ENSMUST00000113567]
[ENSMUST00000113575]
[ENSMUST00000148980]
[ENSMUST00000187411]
|
AlphaFold |
Q8BG75 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000050899
|
SMART Domains |
Protein: ENSMUSP00000057865 Gene: ENSMUSG00000051703
Domain | Start | End | E-Value | Type |
Pfam:DUF4203
|
40 |
236 |
7.2e-51 |
PFAM |
low complexity region
|
252 |
302 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000113567
|
SMART Domains |
Protein: ENSMUSP00000109197 Gene: ENSMUSG00000026211
Domain | Start | End | E-Value | Type |
IGc2
|
24 |
91 |
1.23e-12 |
SMART |
IGc2
|
140 |
216 |
2.33e-13 |
SMART |
IGc2
|
258 |
326 |
1.48e-6 |
SMART |
IG
|
347 |
427 |
9.49e-5 |
SMART |
IG
|
435 |
511 |
1.04e-1 |
SMART |
FN3
|
518 |
601 |
6.6e-2 |
SMART |
PDB:2E6Q|A
|
608 |
714 |
8e-57 |
PDB |
Blast:IG_like
|
622 |
711 |
3e-50 |
BLAST |
IG
|
723 |
804 |
3.79e-4 |
SMART |
IG
|
814 |
893 |
2.58e-6 |
SMART |
IGc2
|
911 |
977 |
1.12e-6 |
SMART |
IG
|
996 |
1075 |
1.27e-5 |
SMART |
IGc2
|
1094 |
1160 |
4.07e-4 |
SMART |
IGc2
|
1186 |
1252 |
9.49e-5 |
SMART |
IG
|
1274 |
1353 |
7.41e-7 |
SMART |
IG
|
1363 |
1444 |
1.15e-3 |
SMART |
IG
|
1454 |
1533 |
8.33e-1 |
SMART |
IGc2
|
1549 |
1615 |
8.72e-4 |
SMART |
IG
|
1633 |
1712 |
1e-3 |
SMART |
IG
|
1723 |
1802 |
3.82e-9 |
SMART |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000113575
|
SMART Domains |
Protein: ENSMUSP00000109205 Gene: ENSMUSG00000051703
Domain | Start | End | E-Value | Type |
Pfam:DUF4203
|
39 |
237 |
2.2e-59 |
PFAM |
low complexity region
|
252 |
302 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000148980
|
SMART Domains |
Protein: ENSMUSP00000116977 Gene: ENSMUSG00000051703
Domain | Start | End | E-Value | Type |
low complexity region
|
8 |
19 |
N/A |
INTRINSIC |
Pfam:DUF4203
|
119 |
150 |
6.6e-12 |
PFAM |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000154636
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000156499
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000156705
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000187411
|
SMART Domains |
Protein: ENSMUSP00000140795 Gene: ENSMUSG00000051703
Domain | Start | End | E-Value | Type |
low complexity region
|
38 |
50 |
N/A |
INTRINSIC |
Pfam:DUF4203
|
101 |
142 |
6.9e-10 |
PFAM |
|
Coding Region Coverage |
|
Validation Efficiency |
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 28 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
1700003H04Rik |
A |
G |
3: 124,373,527 (GRCm39) |
S23P |
possibly damaging |
Het |
Adam1a |
T |
C |
5: 121,657,439 (GRCm39) |
Y618C |
probably benign |
Het |
Amigo2 |
A |
C |
15: 97,143,107 (GRCm39) |
S438R |
probably benign |
Het |
Atp5me |
T |
C |
5: 108,581,922 (GRCm39) |
I21V |
probably benign |
Het |
Dnah2 |
T |
C |
11: 69,365,017 (GRCm39) |
|
probably benign |
Het |
Dock2 |
A |
G |
11: 34,260,390 (GRCm39) |
Y984H |
probably damaging |
Het |
Dpysl2 |
T |
A |
14: 67,045,367 (GRCm39) |
I469F |
possibly damaging |
Het |
Edem3 |
C |
T |
1: 151,694,379 (GRCm39) |
T886I |
probably benign |
Het |
Gart |
T |
C |
16: 91,422,400 (GRCm39) |
T706A |
probably benign |
Het |
Gfpt2 |
A |
T |
11: 49,698,517 (GRCm39) |
|
probably benign |
Het |
Gm11541 |
T |
G |
11: 94,586,495 (GRCm39) |
D84A |
unknown |
Het |
Gne |
T |
C |
4: 44,041,860 (GRCm39) |
|
probably null |
Het |
Gria4 |
A |
T |
9: 4,503,652 (GRCm39) |
D321E |
probably benign |
Het |
Ift122 |
T |
G |
6: 115,889,565 (GRCm39) |
|
probably null |
Het |
Lcp2 |
A |
T |
11: 33,997,345 (GRCm39) |
|
probably benign |
Het |
Mcm2 |
C |
T |
6: 88,868,948 (GRCm39) |
|
probably benign |
Het |
Or8b54 |
A |
G |
9: 38,687,225 (GRCm39) |
I225V |
probably benign |
Het |
Ptpru |
C |
A |
4: 131,496,803 (GRCm39) |
|
probably benign |
Het |
Rpap2 |
T |
C |
5: 107,751,492 (GRCm39) |
|
probably null |
Het |
Slc25a39 |
T |
C |
11: 102,295,726 (GRCm39) |
T138A |
probably damaging |
Het |
St6galnac1 |
A |
C |
11: 116,660,165 (GRCm39) |
S49R |
probably benign |
Het |
Stat1 |
T |
C |
1: 52,178,502 (GRCm39) |
L312P |
probably damaging |
Het |
Top2a |
A |
T |
11: 98,901,856 (GRCm39) |
L458Q |
probably damaging |
Het |
Treml4 |
T |
C |
17: 48,572,023 (GRCm39) |
|
probably benign |
Het |
Trpm6 |
A |
G |
19: 18,786,933 (GRCm39) |
D503G |
probably damaging |
Het |
Ttn |
C |
A |
2: 76,775,617 (GRCm39) |
E1854D |
unknown |
Het |
Ubqln3 |
A |
T |
7: 103,791,403 (GRCm39) |
M229K |
possibly damaging |
Het |
Zfyve9 |
T |
C |
4: 108,539,457 (GRCm39) |
T939A |
probably damaging |
Het |
|
Other mutations in Tmem198 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL03033:Tmem198
|
APN |
1 |
75,459,612 (GRCm39) |
missense |
possibly damaging |
0.92 |
R1165:Tmem198
|
UTSW |
1 |
75,456,576 (GRCm39) |
intron |
probably benign |
|
R1876:Tmem198
|
UTSW |
1 |
75,461,567 (GRCm39) |
missense |
probably damaging |
1.00 |
R4638:Tmem198
|
UTSW |
1 |
75,456,351 (GRCm39) |
nonsense |
probably null |
|
R5320:Tmem198
|
UTSW |
1 |
75,456,500 (GRCm39) |
missense |
probably benign |
|
R6369:Tmem198
|
UTSW |
1 |
75,456,387 (GRCm39) |
missense |
probably benign |
0.00 |
R6601:Tmem198
|
UTSW |
1 |
75,457,017 (GRCm39) |
missense |
possibly damaging |
0.71 |
R7455:Tmem198
|
UTSW |
1 |
75,456,430 (GRCm39) |
missense |
unknown |
|
R8027:Tmem198
|
UTSW |
1 |
75,456,706 (GRCm39) |
intron |
probably benign |
|
R8163:Tmem198
|
UTSW |
1 |
75,459,671 (GRCm39) |
missense |
possibly damaging |
0.63 |
R8502:Tmem198
|
UTSW |
1 |
75,459,353 (GRCm39) |
missense |
probably damaging |
1.00 |
R9191:Tmem198
|
UTSW |
1 |
75,456,426 (GRCm39) |
missense |
unknown |
|
R9329:Tmem198
|
UTSW |
1 |
75,456,522 (GRCm39) |
missense |
probably damaging |
0.99 |
R9664:Tmem198
|
UTSW |
1 |
75,459,272 (GRCm39) |
missense |
possibly damaging |
0.71 |
Z1088:Tmem198
|
UTSW |
1 |
75,456,906 (GRCm39) |
missense |
probably benign |
0.18 |
|
Posted On |
2013-11-11 |