Incidental Mutation 'R1080:Fam136b-ps'
ID 85842
Institutional Source Beutler Lab
Gene Symbol Fam136b-ps
Ensembl Gene ENSMUSG00000055416
Gene Name family with sequence similarity 136, member B, pseudogene
Synonyms
MMRRC Submission 039166-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.153) question?
Stock # R1080 (G1)
Quality Score 225
Status Not validated
Chromosome 15
Chromosomal Location 31276637-31277048 bp(+) (GRCm39)
Type of Mutation unclassified
DNA Base Change (assembly) T to C at 31276739 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000140481 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000044524] [ENSMUST00000068987] [ENSMUST00000185618] [ENSMUST00000186109] [ENSMUST00000186425] [ENSMUST00000186547]
AlphaFold no structure available at present
Predicted Effect probably benign
Transcript: ENSMUST00000044524
SMART Domains Protein: ENSMUSP00000047186
Gene: ENSMUSG00000039168

DomainStartEndE-ValueType
Pfam:DAP 12 102 3.3e-34 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000068987
SMART Domains Protein: ENSMUSP00000125904
Gene: ENSMUSG00000055416

DomainStartEndE-ValueType
Pfam:DUF842 5 132 2.4e-48 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000185618
SMART Domains Protein: ENSMUSP00000140568
Gene: ENSMUSG00000039168

DomainStartEndE-ValueType
Pfam:DAP 3 62 4.5e-15 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000186109
Predicted Effect probably benign
Transcript: ENSMUST00000186425
SMART Domains Protein: ENSMUSP00000140007
Gene: ENSMUSG00000039168

DomainStartEndE-ValueType
Pfam:DAP 1 79 6.5e-20 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000186547
SMART Domains Protein: ENSMUSP00000140481
Gene: ENSMUSG00000039168

DomainStartEndE-ValueType
Pfam:DAP 1 79 6.5e-20 PFAM
Coding Region Coverage
  • 1x: 99.4%
  • 3x: 98.8%
  • 10x: 97.5%
  • 20x: 95.2%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 32 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
2310022A10Rik A G 7: 27,265,109 (GRCm39) N87S probably benign Het
Agbl3 A T 6: 34,805,170 (GRCm39) N679I probably benign Het
Akp3 T A 1: 87,054,723 (GRCm39) F353I probably damaging Het
Bltp1 A G 3: 37,042,404 (GRCm39) T2797A probably damaging Het
Calu A G 6: 29,366,919 (GRCm39) T44A possibly damaging Het
Cd180 G A 13: 102,842,728 (GRCm39) W591* probably null Het
Cnbd2 A G 2: 156,181,193 (GRCm39) N209S probably benign Het
Fam120a G T 13: 49,039,219 (GRCm39) A979E possibly damaging Het
Fbln5 A T 12: 101,717,131 (GRCm39) M419K possibly damaging Het
Galr1 A C 18: 82,423,632 (GRCm39) I215S probably damaging Het
Kcnma1 G C 14: 23,544,675 (GRCm39) Q436E probably damaging Het
Khsrp GTCATT GT 17: 57,331,410 (GRCm39) probably null Het
Klhdc8b T C 9: 108,326,837 (GRCm39) N175S probably benign Het
Lrrk2 T C 15: 91,557,892 (GRCm39) V76A probably benign Het
Mnat1 T C 12: 73,319,292 (GRCm39) F305S probably damaging Het
Nck2 T C 1: 43,572,741 (GRCm39) V5A probably benign Het
Nkd1 T A 8: 89,318,647 (GRCm39) M428K probably benign Het
Or4e5 A T 14: 52,728,042 (GRCm39) Y43* probably null Het
Pcdh7 T C 5: 57,876,768 (GRCm39) C108R probably damaging Het
Rtf2 G T 2: 172,310,666 (GRCm39) W299L probably damaging Het
Smtn C A 11: 3,467,693 (GRCm39) R942L probably damaging Het
Svil C T 18: 5,058,147 (GRCm39) P265S possibly damaging Het
Tdrd3 T C 14: 87,743,834 (GRCm39) L588P probably benign Het
Tecpr1 A G 5: 144,153,747 (GRCm39) Y169H probably damaging Het
Tktl2 G A 8: 66,964,999 (GRCm39) V186M probably damaging Het
Tmprss2 G A 16: 97,392,698 (GRCm39) S83L probably benign Het
Tut4 A G 4: 108,336,696 (GRCm39) E140G possibly damaging Het
Vmn2r112 T C 17: 22,837,980 (GRCm39) S814P probably damaging Het
Zfp386 T A 12: 116,023,426 (GRCm39) C381* probably null Het
Zfp809 T G 9: 22,146,405 (GRCm39) D31E probably damaging Het
Zfy2 T A Y: 2,121,645 (GRCm39) T83S probably benign Het
Zswim6 A G 13: 107,924,186 (GRCm39) noncoding transcript Het
Other mutations in Fam136b-ps
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01289:Fam136b-ps APN 15 31,277,010 (GRCm39) unclassified probably benign
R5033:Fam136b-ps UTSW 15 31,277,043 (GRCm39) unclassified probably benign
R5070:Fam136b-ps UTSW 15 31,276,862 (GRCm39) unclassified probably benign
R5110:Fam136b-ps UTSW 15 31,276,856 (GRCm39) unclassified probably benign
R6629:Fam136b-ps UTSW 15 31,276,962 (GRCm39) unclassified probably benign
Predicted Primers PCR Primer
(F):5'- AAGTCACTGTCAACACACGGGTGC -3'
(R):5'- TCTTAAATAGCCTGCCCGCAGTCC -3'

Sequencing Primer
(F):5'- CACCATGGTGAAAAGTGTGGA -3'
(R):5'- ATGTGGTCATCCACACACTTGG -3'
Posted On 2013-11-18