Incidental Mutation 'IGL01467:Cpne3'
ID |
88142 |
Institutional Source |
Australian Phenomics Network
(link to record)
|
Gene Symbol |
Cpne3
|
Ensembl Gene |
ENSMUSG00000028228 |
Gene Name |
copine III |
Synonyms |
5430428M23Rik, CPN3, PRO1071, 5730450C07Rik |
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.143)
|
Stock # |
IGL01467
|
Quality Score |
|
Status
|
|
Chromosome |
4 |
Chromosomal Location |
19519254-19570108 bp(-) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
C to A
at 19553737 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Cysteine to Phenylalanine
at position 98
(C98F)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000029885
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000029885]
|
AlphaFold |
Q8BT60 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000029885
AA Change: C98F
PolyPhen 2
Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
|
SMART Domains |
Protein: ENSMUSP00000029885 Gene: ENSMUSG00000028228 AA Change: C98F
Domain | Start | End | E-Value | Type |
C2
|
7 |
114 |
1.06e-10 |
SMART |
C2
|
139 |
245 |
9.53e-13 |
SMART |
low complexity region
|
253 |
262 |
N/A |
INTRINSIC |
VWA
|
289 |
495 |
7.54e-18 |
SMART |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000108254
|
Coding Region Coverage |
|
Validation Efficiency |
|
MGI Phenotype |
FUNCTION: Calcium-dependent membrane-binding proteins may regulate molecular events at the interface of the cell membrane and cytoplasm. This gene is one of several genes that encodes a calcium-dependent protein containing two N-terminal type II C2 domains and an integrin A domain-like sequence in the C-terminus. [provided by RefSeq, Jul 2008]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 35 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Adam1a |
A |
G |
5: 121,657,791 (GRCm39) |
C501R |
probably damaging |
Het |
Atxn1 |
C |
T |
13: 45,720,669 (GRCm39) |
V409I |
probably damaging |
Het |
Cdkn2aip |
T |
C |
8: 48,164,247 (GRCm39) |
R489G |
probably damaging |
Het |
Cgn |
A |
G |
3: 94,686,898 (GRCm39) |
S135P |
probably damaging |
Het |
Cyp2c23 |
T |
C |
19: 44,003,512 (GRCm39) |
N221S |
possibly damaging |
Het |
Dnah8 |
A |
G |
17: 30,998,890 (GRCm39) |
N3525S |
probably damaging |
Het |
Efr3b |
T |
C |
12: 4,019,597 (GRCm39) |
E560G |
probably damaging |
Het |
Eif2b5 |
C |
A |
16: 20,327,714 (GRCm39) |
C154* |
probably null |
Het |
Eps8l2 |
A |
G |
7: 140,941,514 (GRCm39) |
E595G |
probably damaging |
Het |
Gm9839 |
A |
T |
1: 32,559,032 (GRCm39) |
I350N |
probably damaging |
Het |
Hdlbp |
A |
T |
1: 93,345,420 (GRCm39) |
|
probably benign |
Het |
Il18rap |
A |
T |
1: 40,587,799 (GRCm39) |
I466F |
probably damaging |
Het |
Itpr1 |
T |
A |
6: 108,465,457 (GRCm39) |
I2123N |
probably damaging |
Het |
Jakmip2 |
A |
G |
18: 43,715,352 (GRCm39) |
I58T |
probably benign |
Het |
Kdm2a |
A |
G |
19: 4,374,435 (GRCm39) |
S899P |
probably damaging |
Het |
Mmp15 |
T |
A |
8: 96,092,959 (GRCm39) |
F113I |
probably benign |
Het |
Neb |
T |
C |
2: 52,049,499 (GRCm39) |
H6448R |
possibly damaging |
Het |
Or1j12 |
C |
T |
2: 36,342,656 (GRCm39) |
R20* |
probably null |
Het |
Or2m13 |
T |
C |
16: 19,226,539 (GRCm39) |
T77A |
probably benign |
Het |
Pdgfc |
A |
G |
3: 81,116,398 (GRCm39) |
T251A |
probably damaging |
Het |
Pdgfra |
T |
C |
5: 75,346,292 (GRCm39) |
|
probably null |
Het |
Pdpk1 |
A |
G |
17: 24,307,144 (GRCm39) |
S269P |
probably damaging |
Het |
Pip4k2c |
A |
T |
10: 127,035,498 (GRCm39) |
F347L |
probably benign |
Het |
Platr26 |
T |
C |
2: 71,553,656 (GRCm39) |
|
noncoding transcript |
Het |
Pnisr |
C |
T |
4: 21,874,650 (GRCm39) |
|
probably benign |
Het |
Psma5-ps |
A |
G |
10: 85,149,986 (GRCm39) |
|
noncoding transcript |
Het |
Rab3gap1 |
T |
A |
1: 127,858,121 (GRCm39) |
|
probably null |
Het |
Scn10a |
C |
T |
9: 119,487,478 (GRCm39) |
V619I |
probably benign |
Het |
Slc38a11 |
T |
A |
2: 65,147,200 (GRCm39) |
T426S |
probably benign |
Het |
Son |
T |
C |
16: 91,454,165 (GRCm39) |
S971P |
possibly damaging |
Het |
Stk33 |
T |
A |
7: 108,928,796 (GRCm39) |
I239L |
probably damaging |
Het |
Tiparp |
G |
T |
3: 65,460,030 (GRCm39) |
G442* |
probably null |
Het |
Tmem270 |
G |
T |
5: 134,930,815 (GRCm39) |
|
probably benign |
Het |
Vmn2r4 |
A |
T |
3: 64,313,816 (GRCm39) |
N388K |
probably damaging |
Het |
Zfp750 |
A |
T |
11: 121,403,767 (GRCm39) |
C369* |
probably null |
Het |
|
Other mutations in Cpne3 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01131:Cpne3
|
APN |
4 |
19,543,318 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01325:Cpne3
|
APN |
4 |
19,535,229 (GRCm39) |
missense |
probably benign |
0.00 |
IGL02043:Cpne3
|
APN |
4 |
19,543,340 (GRCm39) |
splice site |
probably null |
|
IGL02992:Cpne3
|
APN |
4 |
19,532,486 (GRCm39) |
missense |
probably benign |
|
IGL03330:Cpne3
|
APN |
4 |
19,553,774 (GRCm39) |
missense |
possibly damaging |
0.63 |
LCD18:Cpne3
|
UTSW |
4 |
19,563,382 (GRCm39) |
intron |
probably benign |
|
R0507:Cpne3
|
UTSW |
4 |
19,532,544 (GRCm39) |
splice site |
probably benign |
|
R0652:Cpne3
|
UTSW |
4 |
19,532,486 (GRCm39) |
missense |
probably benign |
|
R1499:Cpne3
|
UTSW |
4 |
19,526,336 (GRCm39) |
missense |
probably damaging |
1.00 |
R1881:Cpne3
|
UTSW |
4 |
19,535,266 (GRCm39) |
missense |
probably benign |
0.03 |
R2007:Cpne3
|
UTSW |
4 |
19,553,833 (GRCm39) |
missense |
probably damaging |
1.00 |
R2147:Cpne3
|
UTSW |
4 |
19,536,562 (GRCm39) |
missense |
probably benign |
|
R2507:Cpne3
|
UTSW |
4 |
19,553,871 (GRCm39) |
missense |
probably damaging |
1.00 |
R4525:Cpne3
|
UTSW |
4 |
19,523,206 (GRCm39) |
missense |
probably damaging |
1.00 |
R4880:Cpne3
|
UTSW |
4 |
19,540,827 (GRCm39) |
missense |
probably benign |
|
R5219:Cpne3
|
UTSW |
4 |
19,526,366 (GRCm39) |
missense |
probably damaging |
1.00 |
R5518:Cpne3
|
UTSW |
4 |
19,553,779 (GRCm39) |
missense |
probably benign |
0.10 |
R5883:Cpne3
|
UTSW |
4 |
19,552,314 (GRCm39) |
missense |
possibly damaging |
0.67 |
R6850:Cpne3
|
UTSW |
4 |
19,535,231 (GRCm39) |
missense |
possibly damaging |
0.91 |
R6979:Cpne3
|
UTSW |
4 |
19,533,098 (GRCm39) |
missense |
probably benign |
0.01 |
R7395:Cpne3
|
UTSW |
4 |
19,528,239 (GRCm39) |
missense |
probably damaging |
0.96 |
R7948:Cpne3
|
UTSW |
4 |
19,528,186 (GRCm39) |
critical splice donor site |
probably null |
|
R8002:Cpne3
|
UTSW |
4 |
19,528,232 (GRCm39) |
missense |
probably damaging |
0.99 |
R8056:Cpne3
|
UTSW |
4 |
19,532,426 (GRCm39) |
missense |
possibly damaging |
0.60 |
R8099:Cpne3
|
UTSW |
4 |
19,525,169 (GRCm39) |
missense |
possibly damaging |
0.61 |
R8431:Cpne3
|
UTSW |
4 |
19,526,316 (GRCm39) |
missense |
probably damaging |
0.98 |
R8432:Cpne3
|
UTSW |
4 |
19,535,227 (GRCm39) |
missense |
probably benign |
0.26 |
R9029:Cpne3
|
UTSW |
4 |
19,535,292 (GRCm39) |
missense |
possibly damaging |
0.66 |
R9039:Cpne3
|
UTSW |
4 |
19,540,770 (GRCm39) |
missense |
probably damaging |
0.99 |
R9421:Cpne3
|
UTSW |
4 |
19,536,561 (GRCm39) |
missense |
probably benign |
0.33 |
R9425:Cpne3
|
UTSW |
4 |
19,525,148 (GRCm39) |
missense |
probably damaging |
1.00 |
R9604:Cpne3
|
UTSW |
4 |
19,555,477 (GRCm39) |
missense |
probably benign |
0.04 |
|
Posted On |
2013-11-18 |