Incidental Mutation 'IGL01524:Zmat3'
| ID |
89502 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Zmat3
|
| Ensembl Gene |
ENSMUSG00000027663 |
| Gene Name |
zinc finger matrin type 3 |
| Synonyms |
Wig1 |
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.126)
|
| Stock # |
IGL01524
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
3 |
| Chromosomal Location |
32388941-32419814 bp(-) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
G to A
at 32395827 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Arginine to Cysteine
at position 227
(R227C)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000131317
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000029199]
[ENSMUST00000168566]
|
| AlphaFold |
no structure available at present |
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000029199
AA Change: R227C
PolyPhen 2
Score 0.822 (Sensitivity: 0.84; Specificity: 0.93)
|
| SMART Domains |
Protein: ENSMUSP00000029199
Gene: ENSMUSG00000027663
AA Change: R227C
| Domain | Start | End | E-Value | Type |
|---|
|
ZnF_U1
|
67 |
101 |
1.03e-10 |
SMART |
|
ZnF_C2H2
|
70 |
94 |
9.46e0 |
SMART |
|
ZnF_U1
|
145 |
179 |
1.11e-10 |
SMART |
|
ZnF_C2H2
|
148 |
172 |
5.54e1 |
SMART |
|
ZnF_U1
|
243 |
277 |
7.72e-10 |
SMART |
|
ZnF_C2H2
|
246 |
270 |
6.92e0 |
SMART |
|
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000168566
AA Change: R227C
PolyPhen 2
Score 0.822 (Sensitivity: 0.84; Specificity: 0.93)
|
| SMART Domains |
Protein: ENSMUSP00000131317
Gene: ENSMUSG00000027663
AA Change: R227C
| Domain | Start | End | E-Value | Type |
|---|
|
ZnF_U1
|
67 |
101 |
1.03e-10 |
SMART |
|
ZnF_C2H2
|
70 |
94 |
9.46e0 |
SMART |
|
ZnF_U1
|
145 |
179 |
1.11e-10 |
SMART |
|
ZnF_C2H2
|
148 |
172 |
5.54e1 |
SMART |
|
ZnF_U1
|
243 |
277 |
7.72e-10 |
SMART |
|
ZnF_C2H2
|
246 |
270 |
6.92e0 |
SMART |
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a protein containing three zinc finger domains and a nuclear localization signal. The mRNA and the protein of this gene are upregulated by wildtype p53 and overexpression of this gene inhibits tumor cell growth, suggesting that this gene may have a role in the p53-dependent growth regulatory pathway. Alternative splicing of this gene results in two transcript variants encoding two isoforms differing in only one amino acid. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 33 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Aadat |
A |
T |
8: 60,969,106 (GRCm39) |
D117V |
probably damaging |
Het |
| Abca14 |
T |
C |
7: 119,852,644 (GRCm39) |
Y870H |
possibly damaging |
Het |
| Ankrd36 |
T |
C |
11: 5,585,092 (GRCm39) |
I301T |
probably benign |
Het |
| Atp10b |
T |
A |
11: 43,150,672 (GRCm39) |
S1457T |
probably benign |
Het |
| Bltp1 |
A |
G |
3: 36,996,531 (GRCm39) |
D1081G |
possibly damaging |
Het |
| Ccdc175 |
G |
A |
12: 72,177,916 (GRCm39) |
|
probably benign |
Het |
| Ccdc93 |
A |
G |
1: 121,389,628 (GRCm39) |
K224E |
probably benign |
Het |
| Cep131 |
C |
T |
11: 119,956,786 (GRCm39) |
A886T |
probably damaging |
Het |
| Clip1 |
A |
C |
5: 123,717,442 (GRCm39) |
H1282Q |
probably damaging |
Het |
| Ctcfl |
T |
G |
2: 172,959,177 (GRCm39) |
D183A |
probably benign |
Het |
| Cyp17a1 |
C |
T |
19: 46,659,495 (GRCm39) |
V112I |
probably benign |
Het |
| Fhod3 |
T |
C |
18: 25,263,659 (GRCm39) |
I1521T |
probably damaging |
Het |
| Gipc2 |
A |
G |
3: 151,843,214 (GRCm39) |
I141T |
probably damaging |
Het |
| Glo1 |
T |
C |
17: 30,815,393 (GRCm39) |
R141G |
possibly damaging |
Het |
| Ipmk |
C |
A |
10: 71,208,631 (GRCm39) |
A140E |
probably damaging |
Het |
| Kynu |
A |
G |
2: 43,561,394 (GRCm39) |
D310G |
possibly damaging |
Het |
| Myo1f |
T |
A |
17: 33,798,857 (GRCm39) |
I174N |
probably damaging |
Het |
| Nat10 |
T |
A |
2: 103,588,102 (GRCm39) |
N8Y |
probably damaging |
Het |
| Nhlrc2 |
A |
G |
19: 56,564,587 (GRCm39) |
I304V |
probably benign |
Het |
| Pdk4 |
T |
C |
6: 5,491,979 (GRCm39) |
H31R |
probably damaging |
Het |
| Sema6d |
T |
C |
2: 124,505,995 (GRCm39) |
V644A |
possibly damaging |
Het |
| Slc30a4 |
T |
A |
2: 122,544,308 (GRCm39) |
K11N |
possibly damaging |
Het |
| Slc6a3 |
T |
C |
13: 73,686,668 (GRCm39) |
S12P |
probably benign |
Het |
| Spats2 |
C |
T |
15: 99,110,127 (GRCm39) |
A508V |
probably benign |
Het |
| Tinag |
A |
G |
9: 76,952,820 (GRCm39) |
Y55H |
probably damaging |
Het |
| Topbp1 |
T |
C |
9: 103,188,844 (GRCm39) |
I172T |
possibly damaging |
Het |
| Trim17 |
A |
G |
11: 58,861,423 (GRCm39) |
T279A |
probably damaging |
Het |
| Vmn1r216 |
C |
A |
13: 23,283,519 (GRCm39) |
N67K |
probably benign |
Het |
| Washc4 |
T |
C |
10: 83,411,996 (GRCm39) |
L709P |
probably benign |
Het |
| Xdh |
T |
C |
17: 74,230,132 (GRCm39) |
|
probably null |
Het |
| Zfhx4 |
C |
T |
3: 5,309,036 (GRCm39) |
P754L |
probably damaging |
Het |
| Zfp267 |
T |
C |
3: 36,218,729 (GRCm39) |
Y251H |
possibly damaging |
Het |
| Zfp623 |
C |
A |
15: 75,819,528 (GRCm39) |
S161R |
probably benign |
Het |
|
| Other mutations in Zmat3 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01687:Zmat3
|
APN |
3 |
32,395,680 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02251:Zmat3
|
APN |
3 |
32,399,732 (GRCm39) |
splice site |
probably benign |
|
|
IGL03110:Zmat3
|
APN |
3 |
32,399,701 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R0585:Zmat3
|
UTSW |
3 |
32,415,254 (GRCm39) |
missense |
probably damaging |
0.96 |
|
R1258:Zmat3
|
UTSW |
3 |
32,397,820 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R1916:Zmat3
|
UTSW |
3 |
32,397,497 (GRCm39) |
missense |
probably benign |
0.00 |
|
R1968:Zmat3
|
UTSW |
3 |
32,415,131 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4805:Zmat3
|
UTSW |
3 |
32,397,504 (GRCm39) |
missense |
probably benign |
0.00 |
|
R4906:Zmat3
|
UTSW |
3 |
32,397,836 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6252:Zmat3
|
UTSW |
3 |
32,395,770 (GRCm39) |
missense |
possibly damaging |
0.55 |
|
R6844:Zmat3
|
UTSW |
3 |
32,395,644 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7998:Zmat3
|
UTSW |
3 |
32,395,815 (GRCm39) |
missense |
possibly damaging |
0.89 |
|
R8316:Zmat3
|
UTSW |
3 |
32,395,670 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9154:Zmat3
|
UTSW |
3 |
32,397,767 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
| Posted On |
2013-12-03 |
Incidental Mutation