Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL01524:Xdh'

89523

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Xdh

Ensembl Gene

ENSMUSG00000024066

Gene Name

xanthine dehydrogenase

Synonyms

xanthine oxidase, XO, Xor, Xox1, Xox-1

Accession Numbers

Essential gene?

Possibly non essential (E-score: 0.483) question?

Stock #

IGL01524

Quality Score

Status

Chromosome

Chromosomal Location

73883908-73950182 bp(-) (GRCm38)

Type of Mutation

critical splice acceptor site

DNA Base Change (assembly)

T to C at 73923137 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Ref Sequence

ENSEMBL: ENSMUSP00000024866 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000024866]

AlphaFold

Q00519

Predicted Effect

probably null
Transcript: ENSMUST00000024866

SMART Domains

Protein: ENSMUSP00000024866
Gene: ENSMUSG00000024066

Domain	Start	End	E-Value	Type
Pfam:Fer2	11	81	5e-12	PFAM
Pfam:Fer2_2	90	163	4.1e-31	PFAM
low complexity region	169	182	N/A	INTRINSIC
Pfam:FAD_binding_5	234	414	4.9e-47	PFAM
CO_deh_flav_C	421	525	1.16e-24	SMART
Ald_Xan_dh_C	590	696	1.23e-46	SMART
Pfam:Ald_Xan_dh_C2	704	1239	1e-200	PFAM

Coding Region Coverage

Validation Efficiency

MGI Phenotype

FUNCTION: This gene encodes a member of the xanthine dehydrogenase protein family. The encoded protein has been identified as a moonlighting protein based on its ability to perform mechanistically distinct functions. The encoded protein exists as two distinct enzymatic forms, either as xanthine dehydrogenase, or as xanthine oxidase, and functions in purine degradation. Additional studies also suggest a role in adipogenesis, and a function as a structural protein in milk fat droplets in the lactating mammary gland. [provided by RefSeq, Jan 2014]
PHENOTYPE: Homozygotes for a null allele are small and die prematurely while heterozygous females show a lactation defect. Most homozygotes for another null allele die within the first month of renal failure associated with uric acid depletion, renal tubular damage, inflammation, fibrosis and oxidative stress. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 33 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4932438A13Rik	A	G	3: 36,942,382 (GRCm38)	D1081G	possibly damaging	Het
Aadat	A	T	8: 60,516,072 (GRCm38)	D117V	probably damaging	Het
Abca14	T	C	7: 120,253,421 (GRCm38)	Y870H	possibly damaging	Het
Ankrd36	T	C	11: 5,635,092 (GRCm38)	I301T	probably benign	Het
Atp10b	T	A	11: 43,259,845 (GRCm38)	S1457T	probably benign	Het
Ccdc175	G	A	12: 72,131,142 (GRCm38)		probably benign	Het
Ccdc93	A	G	1: 121,461,899 (GRCm38)	K224E	probably benign	Het
Cep131	C	T	11: 120,065,960 (GRCm38)	A886T	probably damaging	Het
Clip1	A	C	5: 123,579,379 (GRCm38)	H1282Q	probably damaging	Het
Ctcfl	T	G	2: 173,117,384 (GRCm38)	D183A	probably benign	Het
Cyp17a1	C	T	19: 46,671,056 (GRCm38)	V112I	probably benign	Het
D3Ertd254e	T	C	3: 36,164,580 (GRCm38)	Y251H	possibly damaging	Het
Fhod3	T	C	18: 25,130,602 (GRCm38)	I1521T	probably damaging	Het
Gipc2	A	G	3: 152,137,577 (GRCm38)	I141T	probably damaging	Het
Glo1	T	C	17: 30,596,419 (GRCm38)	R141G	possibly damaging	Het
Ipmk	C	A	10: 71,372,801 (GRCm38)	A140E	probably damaging	Het
Kynu	A	G	2: 43,671,382 (GRCm38)	D310G	possibly damaging	Het
Myo1f	T	A	17: 33,579,883 (GRCm38)	I174N	probably damaging	Het
Nat10	T	A	2: 103,757,757 (GRCm38)	N8Y	probably damaging	Het
Nhlrc2	A	G	19: 56,576,155 (GRCm38)	I304V	probably benign	Het
Pdk4	T	C	6: 5,491,979 (GRCm38)	H31R	probably damaging	Het
Sema6d	T	C	2: 124,664,075 (GRCm38)	V644A	possibly damaging	Het
Slc30a4	T	A	2: 122,702,388 (GRCm38)	K11N	possibly damaging	Het
Slc6a3	T	C	13: 73,538,549 (GRCm38)	S12P	probably benign	Het
Spats2	C	T	15: 99,212,246 (GRCm38)	A508V	probably benign	Het
Tinag	A	G	9: 77,045,538 (GRCm38)	Y55H	probably damaging	Het
Topbp1	T	C	9: 103,311,645 (GRCm38)	I172T	possibly damaging	Het
Trim17	A	G	11: 58,970,597 (GRCm38)	T279A	probably damaging	Het
Vmn1r216	C	A	13: 23,099,349 (GRCm38)	N67K	probably benign	Het
Washc4	T	C	10: 83,576,132 (GRCm38)	L709P	probably benign	Het
Zfhx4	C	T	3: 5,243,976 (GRCm38)	P754L	probably damaging	Het
Zfp623	C	A	15: 75,947,679 (GRCm38)	S161R	probably benign	Het
Zmat3	G	A	3: 32,341,678 (GRCm38)	R227C	possibly damaging	Het

Other mutations in Xdh

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00493:Xdh	APN	17	73,923,106 (GRCm38)	missense	possibly damaging	0.58
IGL00556:Xdh	APN	17	73,884,435 (GRCm38)	makesense	probably null
IGL01604:Xdh	APN	17	73,909,337 (GRCm38)	missense	probably benign	0.02
IGL01625:Xdh	APN	17	73,916,786 (GRCm38)	critical splice donor site	probably null
IGL01778:Xdh	APN	17	73,900,280 (GRCm38)	missense	probably benign	0.00
IGL01804:Xdh	APN	17	73,892,759 (GRCm38)	missense	probably damaging	1.00
IGL01825:Xdh	APN	17	73,891,245 (GRCm38)	missense	probably damaging	1.00
IGL01929:Xdh	APN	17	73,934,855 (GRCm38)	missense	probably damaging	1.00
IGL02068:Xdh	APN	17	73,913,950 (GRCm38)	missense	probably damaging	1.00
IGL02079:Xdh	APN	17	73,891,277 (GRCm38)	missense	probably damaging	1.00
IGL02210:Xdh	APN	17	73,943,895 (GRCm38)	missense	probably benign	0.00
IGL02261:Xdh	APN	17	73,913,965 (GRCm38)	missense	possibly damaging	0.81
IGL02365:Xdh	APN	17	73,943,890 (GRCm38)	missense	probably benign	0.14
IGL02424:Xdh	APN	17	73,926,570 (GRCm38)	missense	probably benign	0.00
IGL02491:Xdh	APN	17	73,886,464 (GRCm38)	missense	probably damaging	0.99
IGL02525:Xdh	APN	17	73,924,995 (GRCm38)	missense	possibly damaging	0.91
IGL02578:Xdh	APN	17	73,906,246 (GRCm38)	missense	probably damaging	1.00
IGL02793:Xdh	APN	17	73,900,581 (GRCm38)	missense	probably damaging	1.00
IGL02939:Xdh	APN	17	73,943,845 (GRCm38)	critical splice donor site	probably null
IGL03327:Xdh	APN	17	73,916,792 (GRCm38)	missense	probably benign
IGL03345:Xdh	APN	17	73,906,032 (GRCm38)	missense	probably damaging	0.98
IGL03353:Xdh	APN	17	73,895,786 (GRCm38)	missense	possibly damaging	0.65
inky	UTSW	17	73,921,351 (GRCm38)	missense	probably damaging	1.00
nucleus	UTSW	17	73,899,012 (GRCm38)	nonsense	probably null
squidgame	UTSW	17	73,939,836 (GRCm38)	missense	probably benign
R0018:Xdh	UTSW	17	73,925,025 (GRCm38)	missense	probably benign	0.00
R0018:Xdh	UTSW	17	73,925,025 (GRCm38)	missense	probably benign	0.00
R0033:Xdh	UTSW	17	73,907,632 (GRCm38)	missense	probably benign	0.06
R0079:Xdh	UTSW	17	73,891,218 (GRCm38)	missense	probably damaging	1.00
R0086:Xdh	UTSW	17	73,884,438 (GRCm38)	missense	probably benign
R0319:Xdh	UTSW	17	73,906,101 (GRCm38)	splice site	probably benign
R0336:Xdh	UTSW	17	73,922,463 (GRCm38)	missense	possibly damaging	0.91
R0389:Xdh	UTSW	17	73,898,362 (GRCm38)	missense	probably damaging	1.00
R0684:Xdh	UTSW	17	73,943,891 (GRCm38)	missense	probably damaging	0.97
R0930:Xdh	UTSW	17	73,923,082 (GRCm38)	missense	probably benign	0.00
R1073:Xdh	UTSW	17	73,939,836 (GRCm38)	missense	probably benign
R1114:Xdh	UTSW	17	73,941,149 (GRCm38)	splice site	probably benign
R1201:Xdh	UTSW	17	73,918,418 (GRCm38)	missense	probably benign	0.05
R1230:Xdh	UTSW	17	73,891,256 (GRCm38)	missense	probably damaging	1.00
R1351:Xdh	UTSW	17	73,923,078 (GRCm38)	missense	probably benign	0.02
R1470:Xdh	UTSW	17	73,891,112 (GRCm38)	missense	probably damaging	1.00
R1470:Xdh	UTSW	17	73,891,112 (GRCm38)	missense	probably damaging	1.00
R1485:Xdh	UTSW	17	73,914,019 (GRCm38)	nonsense	probably null
R1548:Xdh	UTSW	17	73,913,901 (GRCm38)	missense	probably damaging	0.98
R1637:Xdh	UTSW	17	73,900,578 (GRCm38)	missense	probably benign
R1641:Xdh	UTSW	17	73,926,552 (GRCm38)	missense	probably benign
R1758:Xdh	UTSW	17	73,910,209 (GRCm38)	missense	probably damaging	1.00
R1951:Xdh	UTSW	17	73,907,658 (GRCm38)	missense	probably damaging	1.00
R1969:Xdh	UTSW	17	73,892,751 (GRCm38)	missense	possibly damaging	0.55
R2024:Xdh	UTSW	17	73,921,305 (GRCm38)	missense	possibly damaging	0.92
R2080:Xdh	UTSW	17	73,909,325 (GRCm38)	missense	probably damaging	1.00
R2157:Xdh	UTSW	17	73,922,537 (GRCm38)	missense	probably damaging	1.00
R2300:Xdh	UTSW	17	73,891,265 (GRCm38)	missense	probably damaging	1.00
R3783:Xdh	UTSW	17	73,893,595 (GRCm38)	splice site	probably benign
R3796:Xdh	UTSW	17	73,907,658 (GRCm38)	missense	probably damaging	1.00
R3797:Xdh	UTSW	17	73,907,658 (GRCm38)	missense	probably damaging	1.00
R3798:Xdh	UTSW	17	73,907,658 (GRCm38)	missense	probably damaging	1.00
R3799:Xdh	UTSW	17	73,907,658 (GRCm38)	missense	probably damaging	1.00
R3819:Xdh	UTSW	17	73,906,725 (GRCm38)	missense	probably benign	0.35
R4085:Xdh	UTSW	17	73,916,879 (GRCm38)	missense	probably benign	0.35
R4240:Xdh	UTSW	17	73,895,795 (GRCm38)	missense	possibly damaging	0.72
R4356:Xdh	UTSW	17	73,915,690 (GRCm38)	missense	probably benign	0.01
R4522:Xdh	UTSW	17	73,898,344 (GRCm38)	missense	probably damaging	1.00
R4523:Xdh	UTSW	17	73,898,344 (GRCm38)	missense	probably damaging	1.00
R4524:Xdh	UTSW	17	73,898,344 (GRCm38)	missense	probably damaging	1.00
R4600:Xdh	UTSW	17	73,910,200 (GRCm38)	missense	probably benign	0.19
R4617:Xdh	UTSW	17	73,918,394 (GRCm38)	missense	probably damaging	0.99
R4756:Xdh	UTSW	17	73,886,386 (GRCm38)	missense	probably benign	0.24
R4761:Xdh	UTSW	17	73,910,267 (GRCm38)	missense	possibly damaging	0.91
R4815:Xdh	UTSW	17	73,906,215 (GRCm38)	missense	probably damaging	1.00
R4850:Xdh	UTSW	17	73,898,335 (GRCm38)	missense	probably damaging	1.00
R4896:Xdh	UTSW	17	73,910,243 (GRCm38)	missense	probably damaging	0.96
R4897:Xdh	UTSW	17	73,900,708 (GRCm38)	missense	probably benign
R4923:Xdh	UTSW	17	73,924,936 (GRCm38)	missense	possibly damaging	0.72
R4977:Xdh	UTSW	17	73,898,970 (GRCm38)	missense	probably benign	0.05
R5030:Xdh	UTSW	17	73,891,293 (GRCm38)	missense	probably damaging	1.00
R5185:Xdh	UTSW	17	73,925,011 (GRCm38)	missense	probably damaging	1.00
R5347:Xdh	UTSW	17	73,925,032 (GRCm38)	missense	probably benign
R5556:Xdh	UTSW	17	73,897,764 (GRCm38)	missense	probably benign	0.21
R5566:Xdh	UTSW	17	73,893,622 (GRCm38)	missense	probably damaging	1.00
R5568:Xdh	UTSW	17	73,943,885 (GRCm38)	missense	possibly damaging	0.90
R5635:Xdh	UTSW	17	73,913,875 (GRCm38)	missense	possibly damaging	0.92
R5662:Xdh	UTSW	17	73,941,115 (GRCm38)	missense	probably damaging	0.99
R5955:Xdh	UTSW	17	73,898,320 (GRCm38)	missense	probably damaging	1.00
R6058:Xdh	UTSW	17	73,906,269 (GRCm38)	missense	probably damaging	1.00
R6061:Xdh	UTSW	17	73,921,347 (GRCm38)	missense	probably damaging	1.00
R6412:Xdh	UTSW	17	73,935,907 (GRCm38)	missense	probably benign	0.09
R6526:Xdh	UTSW	17	73,900,551 (GRCm38)	missense	probably damaging	0.97
R6558:Xdh	UTSW	17	73,893,713 (GRCm38)	missense	possibly damaging	0.95
R6843:Xdh	UTSW	17	73,923,130 (GRCm38)	missense	probably damaging	1.00
R6932:Xdh	UTSW	17	73,922,562 (GRCm38)	missense	probably damaging	0.99
R7028:Xdh	UTSW	17	73,943,873 (GRCm38)	missense	probably damaging	0.99
R7418:Xdh	UTSW	17	73,913,965 (GRCm38)	missense	possibly damaging	0.81
R7503:Xdh	UTSW	17	73,926,210 (GRCm38)	missense	probably damaging	1.00
R7653:Xdh	UTSW	17	73,897,045 (GRCm38)	missense	probably benign	0.10
R7763:Xdh	UTSW	17	73,934,834 (GRCm38)	missense	possibly damaging	0.69
R7768:Xdh	UTSW	17	73,939,836 (GRCm38)	missense	probably benign
R7904:Xdh	UTSW	17	73,922,472 (GRCm38)	missense	probably benign	0.09
R8010:Xdh	UTSW	17	73,909,317 (GRCm38)	nonsense	probably null
R8067:Xdh	UTSW	17	73,900,657 (GRCm38)	missense	probably benign	0.01
R8238:Xdh	UTSW	17	73,886,417 (GRCm38)	missense	probably benign
R8253:Xdh	UTSW	17	73,918,382 (GRCm38)	missense	possibly damaging	0.94
R8346:Xdh	UTSW	17	73,913,943 (GRCm38)	missense	probably damaging	1.00
R8350:Xdh	UTSW	17	73,934,842 (GRCm38)	missense	probably damaging	1.00
R8381:Xdh	UTSW	17	73,912,461 (GRCm38)	missense	probably benign
R8427:Xdh	UTSW	17	73,935,931 (GRCm38)	missense	probably damaging	1.00
R8465:Xdh	UTSW	17	73,899,012 (GRCm38)	nonsense	probably null
R8478:Xdh	UTSW	17	73,906,058 (GRCm38)	missense	probably benign	0.00
R8680:Xdh	UTSW	17	73,922,505 (GRCm38)	missense	probably benign
R8802:Xdh	UTSW	17	73,918,410 (GRCm38)	missense	probably benign	0.00
R8984:Xdh	UTSW	17	73,921,351 (GRCm38)	missense	probably damaging	1.00
R8985:Xdh	UTSW	17	73,921,351 (GRCm38)	missense	probably damaging	1.00
R8995:Xdh	UTSW	17	73,898,374 (GRCm38)	missense	probably damaging	1.00
R9035:Xdh	UTSW	17	73,910,227 (GRCm38)	missense	probably benign
R9149:Xdh	UTSW	17	73,915,693 (GRCm38)	missense	probably benign
R9181:Xdh	UTSW	17	73,925,011 (GRCm38)	missense	probably damaging	1.00
R9357:Xdh	UTSW	17	73,926,546 (GRCm38)	critical splice donor site	probably null
R9357:Xdh	UTSW	17	73,907,716 (GRCm38)	missense	probably damaging	0.97
R9609:Xdh	UTSW	17	73,924,995 (GRCm38)	missense	possibly damaging	0.91
R9803:Xdh	UTSW	17	73,922,460 (GRCm38)	missense	probably benign
X0019:Xdh	UTSW	17	73,918,454 (GRCm38)	missense	probably damaging	1.00
Z1088:Xdh	UTSW	17	73,886,428 (GRCm38)	missense	probably benign
Z1176:Xdh	UTSW	17	73,923,042 (GRCm38)	critical splice donor site	probably null
Z1177:Xdh	UTSW	17	73,897,695 (GRCm38)	missense	probably damaging	1.00

Posted On

2013-12-03