Incidental Mutation 'IGL01575:Dmrtb1'
ID91224
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Dmrtb1
Ensembl Gene ENSMUSG00000028610
Gene NameDMRT-like family B with proline-rich C-terminal, 1
SynonymsDmrt6, Prp13
Accession Numbers
Is this an essential gene? Possibly non essential (E-score: 0.308) question?
Stock #IGL01575
Quality Score
Status
Chromosome4
Chromosomal Location107676290-107684230 bp(-) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) A to G at 107684068 bp
ZygosityHeterozygous
Amino Acid Change Isoleucine to Threonine at position 32 (I32T)
Ref Sequence ENSEMBL: ENSMUSP00000064220 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000069271] [ENSMUST00000131776]
Predicted Effect probably benign
Transcript: ENSMUST00000069271
AA Change: I32T

PolyPhen 2 Score 0.004 (Sensitivity: 0.98; Specificity: 0.59)
SMART Domains Protein: ENSMUSP00000064220
Gene: ENSMUSG00000028610
AA Change: I32T

DomainStartEndE-ValueType
Pfam:DM 3 49 1.5e-22 PFAM
low complexity region 72 82 N/A INTRINSIC
low complexity region 94 102 N/A INTRINSIC
internal_repeat_1 117 131 5.48e-5 PROSPERO
internal_repeat_1 130 143 5.48e-5 PROSPERO
low complexity region 172 190 N/A INTRINSIC
low complexity region 279 306 N/A INTRINSIC
low complexity region 316 326 N/A INTRINSIC
Predicted Effect noncoding transcript
Transcript: ENSMUST00000120565
Predicted Effect noncoding transcript
Transcript: ENSMUST00000131508
Predicted Effect probably benign
Transcript: ENSMUST00000131776
SMART Domains Protein: ENSMUSP00000119617
Gene: ENSMUSG00000028610

DomainStartEndE-ValueType
low complexity region 123 150 N/A INTRINSIC
low complexity region 160 170 N/A INTRINSIC
Coding Region Coverage
Validation Efficiency
MGI Phenotype PHENOTYPE: Male mice homozygous for a knock-out allele exhibit severe spermatogenesis defects, including a disruption of spermatogonial differentiation and a failure to complete meiotic prophase. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 37 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Anapc2 C T 2: 25,285,176 probably benign Het
Atp10b G A 11: 43,172,721 R161H probably benign Het
Boll A G 1: 55,323,648 probably null Het
Cngb1 G A 8: 95,264,520 P226S possibly damaging Het
Commd3 G A 2: 18,674,717 probably null Het
Ddx46 C T 13: 55,654,183 probably benign Het
Dnah7a T C 1: 53,427,820 probably benign Het
Dppa5a A G 9: 78,367,780 I80T possibly damaging Het
Galntl6 T C 8: 58,427,676 probably benign Het
Gm9803 T C 10: 43,524,415 V55A probably benign Het
Hmgcr A G 13: 96,656,595 Y510H possibly damaging Het
Idua G T 5: 108,682,107 R505L possibly damaging Het
Ifna15 A G 4: 88,557,807 F147L probably damaging Het
Itga4 T C 2: 79,288,255 S433P probably damaging Het
Kcnc1 T C 7: 46,428,099 Y442H possibly damaging Het
Kmt2d A G 15: 98,846,855 probably benign Het
Mpp7 A G 18: 7,403,365 probably benign Het
Olfr292 T C 7: 86,695,293 V279A probably benign Het
Olfr488 A C 7: 108,255,535 V201G possibly damaging Het
Olfr790 A G 10: 129,501,567 I228V probably benign Het
Phf14 T C 6: 11,990,051 L693S probably damaging Het
Pkd1 A G 17: 24,573,128 N1263S probably damaging Het
Rhbdl1 G T 17: 25,836,138 A32E possibly damaging Het
Samd9l A G 6: 3,376,734 S176P possibly damaging Het
Scn1a G T 2: 66,273,236 F1893L probably damaging Het
Serpina3f C A 12: 104,218,440 P281Q probably damaging Het
Slc35a1 G T 4: 34,668,932 Q294K probably benign Het
Sspo G A 6: 48,459,042 S1154N probably benign Het
Tdrd6 A G 17: 43,627,980 S726P probably benign Het
Tiam2 A T 17: 3,454,316 E24V probably damaging Het
Tmf1 T C 6: 97,175,936 E392G probably damaging Het
Tns2 T C 15: 102,113,191 V1089A probably damaging Het
Tspyl1 C A 10: 34,283,090 N270K probably damaging Het
Usp32 A T 11: 85,022,802 V901D probably damaging Het
Vldlr A G 19: 27,246,631 I764V probably benign Het
Wnk2 A G 13: 49,146,676 V186A probably damaging Het
Zdhhc18 A G 4: 133,613,899 V221A probably damaging Het
Other mutations in Dmrtb1
AlleleSourceChrCoordTypePredicted EffectPPH Score
R1397:Dmrtb1 UTSW 4 107677039 missense probably damaging 1.00
R1579:Dmrtb1 UTSW 4 107684125 missense probably damaging 1.00
R2025:Dmrtb1 UTSW 4 107683585 missense probably damaging 0.98
R2083:Dmrtb1 UTSW 4 107683612 missense possibly damaging 0.52
R4574:Dmrtb1 UTSW 4 107677068 missense possibly damaging 0.82
R4688:Dmrtb1 UTSW 4 107684050 missense probably damaging 1.00
R4770:Dmrtb1 UTSW 4 107683789 missense probably benign 0.01
R5693:Dmrtb1 UTSW 4 107684169 unclassified probably benign
R6565:Dmrtb1 UTSW 4 107679345 missense probably damaging 0.99
Posted On2013-12-09