Incidental Mutation 'IGL01608:Ccdc136'
ID 91841
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Ccdc136
Ensembl Gene ENSMUSG00000029769
Gene Name coiled-coil domain containing 136
Synonyms 4921511K06Rik
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # IGL01608
Quality Score
Status
Chromosome 6
Chromosomal Location 29396296-29426954 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) C to T at 29406113 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Alanine to Valine at position 87 (A87V)
Ref Sequence ENSEMBL: ENSMUSP00000118132 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000096084] [ENSMUST00000115275] [ENSMUST00000145310] [ENSMUST00000154619] [ENSMUST00000180829] [ENSMUST00000181464] [ENSMUST00000202726]
AlphaFold no structure available at present
Predicted Effect possibly damaging
Transcript: ENSMUST00000096084
AA Change: A245V

PolyPhen 2 Score 0.905 (Sensitivity: 0.82; Specificity: 0.94)
SMART Domains Protein: ENSMUSP00000093789
Gene: ENSMUSG00000029769
AA Change: A245V

DomainStartEndE-ValueType
low complexity region 3 13 N/A INTRINSIC
low complexity region 65 83 N/A INTRINSIC
low complexity region 85 92 N/A INTRINSIC
coiled coil region 99 310 N/A INTRINSIC
coiled coil region 343 408 N/A INTRINSIC
internal_repeat_2 416 435 7.26e-6 PROSPERO
low complexity region 439 453 N/A INTRINSIC
coiled coil region 463 489 N/A INTRINSIC
coiled coil region 526 611 N/A INTRINSIC
low complexity region 645 658 N/A INTRINSIC
coiled coil region 730 779 N/A INTRINSIC
internal_repeat_1 791 810 8.87e-9 PROSPERO
internal_repeat_1 819 838 8.87e-9 PROSPERO
low complexity region 847 868 N/A INTRINSIC
internal_repeat_2 902 921 7.26e-6 PROSPERO
low complexity region 994 1011 N/A INTRINSIC
low complexity region 1023 1041 N/A INTRINSIC
coiled coil region 1066 1104 N/A INTRINSIC
low complexity region 1108 1142 N/A INTRINSIC
transmembrane domain 1154 1176 N/A INTRINSIC
Predicted Effect possibly damaging
Transcript: ENSMUST00000115275
AA Change: A245V

PolyPhen 2 Score 0.770 (Sensitivity: 0.85; Specificity: 0.92)
SMART Domains Protein: ENSMUSP00000110930
Gene: ENSMUSG00000029769
AA Change: A245V

DomainStartEndE-ValueType
low complexity region 3 13 N/A INTRINSIC
low complexity region 65 83 N/A INTRINSIC
low complexity region 85 92 N/A INTRINSIC
coiled coil region 99 310 N/A INTRINSIC
coiled coil region 343 408 N/A INTRINSIC
internal_repeat_2 416 435 1.72e-5 PROSPERO
low complexity region 439 453 N/A INTRINSIC
coiled coil region 463 489 N/A INTRINSIC
coiled coil region 526 611 N/A INTRINSIC
low complexity region 645 658 N/A INTRINSIC
coiled coil region 730 779 N/A INTRINSIC
internal_repeat_1 791 810 2.93e-8 PROSPERO
internal_repeat_1 819 838 2.93e-8 PROSPERO
low complexity region 847 868 N/A INTRINSIC
internal_repeat_2 902 921 1.72e-5 PROSPERO
transmembrane domain 967 989 N/A INTRINSIC
Predicted Effect possibly damaging
Transcript: ENSMUST00000145310
AA Change: A245V

PolyPhen 2 Score 0.643 (Sensitivity: 0.87; Specificity: 0.91)
SMART Domains Protein: ENSMUSP00000145331
Gene: ENSMUSG00000029769
AA Change: A245V

DomainStartEndE-ValueType
low complexity region 3 13 N/A INTRINSIC
low complexity region 65 83 N/A INTRINSIC
low complexity region 85 92 N/A INTRINSIC
coiled coil region 99 310 N/A INTRINSIC
coiled coil region 343 408 N/A INTRINSIC
Predicted Effect possibly damaging
Transcript: ENSMUST00000154619
AA Change: A87V

PolyPhen 2 Score 0.905 (Sensitivity: 0.82; Specificity: 0.94)
SMART Domains Protein: ENSMUSP00000118132
Gene: ENSMUSG00000029769
AA Change: A87V

DomainStartEndE-ValueType
coiled coil region 1 152 N/A INTRINSIC
coiled coil region 185 250 N/A INTRINSIC
internal_repeat_2 258 277 4.68e-6 PROSPERO
low complexity region 281 295 N/A INTRINSIC
coiled coil region 305 331 N/A INTRINSIC
coiled coil region 368 453 N/A INTRINSIC
low complexity region 487 500 N/A INTRINSIC
coiled coil region 572 621 N/A INTRINSIC
internal_repeat_1 633 652 5.47e-9 PROSPERO
internal_repeat_1 661 680 5.47e-9 PROSPERO
low complexity region 689 710 N/A INTRINSIC
internal_repeat_2 744 763 4.68e-6 PROSPERO
low complexity region 836 853 N/A INTRINSIC
low complexity region 865 883 N/A INTRINSIC
coiled coil region 908 946 N/A INTRINSIC
low complexity region 950 984 N/A INTRINSIC
transmembrane domain 996 1018 N/A INTRINSIC
Predicted Effect possibly damaging
Transcript: ENSMUST00000180829
AA Change: A153V

PolyPhen 2 Score 0.877 (Sensitivity: 0.83; Specificity: 0.94)
SMART Domains Protein: ENSMUSP00000137747
Gene: ENSMUSG00000029769
AA Change: A153V

DomainStartEndE-ValueType
coiled coil region 7 218 N/A INTRINSIC
coiled coil region 251 316 N/A INTRINSIC
internal_repeat_2 324 343 1.21e-5 PROSPERO
low complexity region 347 361 N/A INTRINSIC
coiled coil region 371 397 N/A INTRINSIC
coiled coil region 434 519 N/A INTRINSIC
low complexity region 553 566 N/A INTRINSIC
coiled coil region 638 687 N/A INTRINSIC
internal_repeat_1 699 718 1.98e-8 PROSPERO
internal_repeat_1 727 746 1.98e-8 PROSPERO
low complexity region 755 776 N/A INTRINSIC
internal_repeat_2 810 829 1.21e-5 PROSPERO
transmembrane domain 875 897 N/A INTRINSIC
Predicted Effect possibly damaging
Transcript: ENSMUST00000181464
AA Change: A153V

PolyPhen 2 Score 0.770 (Sensitivity: 0.85; Specificity: 0.92)
SMART Domains Protein: ENSMUSP00000137673
Gene: ENSMUSG00000029769
AA Change: A153V

DomainStartEndE-ValueType
coiled coil region 7 218 N/A INTRINSIC
coiled coil region 251 316 N/A INTRINSIC
internal_repeat_2 324 343 7.68e-6 PROSPERO
low complexity region 347 361 N/A INTRINSIC
coiled coil region 371 397 N/A INTRINSIC
coiled coil region 434 519 N/A INTRINSIC
low complexity region 553 566 N/A INTRINSIC
coiled coil region 638 687 N/A INTRINSIC
internal_repeat_1 699 718 1.04e-8 PROSPERO
internal_repeat_1 727 746 1.04e-8 PROSPERO
low complexity region 755 776 N/A INTRINSIC
internal_repeat_2 810 829 7.68e-6 PROSPERO
low complexity region 902 919 N/A INTRINSIC
low complexity region 931 949 N/A INTRINSIC
transmembrane domain 969 991 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000202726
SMART Domains Protein: ENSMUSP00000144577
Gene: ENSMUSG00000029769

DomainStartEndE-ValueType
coiled coil region 25 90 N/A INTRINSIC
transmembrane domain 94 116 N/A INTRINSIC
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 60 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abca1 A T 4: 53,038,158 (GRCm39) L2068Q probably damaging Het
Abca12 G T 1: 71,298,601 (GRCm39) D2340E probably damaging Het
Adcy5 A G 16: 35,092,535 (GRCm39) Y632C probably damaging Het
Adgrb3 A G 1: 25,592,855 (GRCm39) S311P probably damaging Het
Adh4 C T 3: 138,134,788 (GRCm39) probably benign Het
Atf2 G T 2: 73,649,422 (GRCm39) H396Q probably damaging Het
Atp8a1 G A 5: 67,970,479 (GRCm39) R74* probably null Het
Brpf3 T C 17: 29,040,491 (GRCm39) S971P probably benign Het
Btn1a1 T C 13: 23,645,778 (GRCm39) E197G probably benign Het
Celf4 A G 18: 25,630,560 (GRCm39) L376P probably damaging Het
Chrm3 G A 13: 9,928,634 (GRCm39) A134V possibly damaging Het
Col19a1 G A 1: 24,321,626 (GRCm39) R961C probably damaging Het
Cr2 A G 1: 194,837,528 (GRCm39) V1190A possibly damaging Het
Dop1a T A 9: 86,389,614 (GRCm39) S515T probably benign Het
Eprs1 T A 1: 185,117,311 (GRCm39) probably benign Het
Fbn2 G T 18: 58,186,776 (GRCm39) Y1708* probably null Het
Glt1d1 A G 5: 127,741,746 (GRCm39) N148S possibly damaging Het
Gm20425 T A 9: 103,068,293 (GRCm39) I44F probably damaging Het
Gpr22 T A 12: 31,758,779 (GRCm39) K411* probably null Het
Ipo11 A G 13: 106,971,002 (GRCm39) probably benign Het
Klri1 T A 6: 129,675,130 (GRCm39) N210I possibly damaging Het
Kmt2c C T 5: 25,559,809 (GRCm39) V950M probably damaging Het
Knop1 T C 7: 118,445,019 (GRCm39) K315R probably benign Het
Krt90 A G 15: 101,471,064 (GRCm39) I66T probably benign Het
Lrrc32 T A 7: 98,148,564 (GRCm39) V448D probably benign Het
Met T C 6: 17,558,729 (GRCm39) V1119A probably damaging Het
Minar1 T C 9: 89,478,551 (GRCm39) T832A probably benign Het
Mipep T A 14: 61,039,679 (GRCm39) I236N possibly damaging Het
Mrpl45 A G 11: 97,207,747 (GRCm39) T81A probably benign Het
Mtbp G T 15: 55,421,085 (GRCm39) E24* probably null Het
Muc5b C T 7: 141,400,174 (GRCm39) T476I unknown Het
Mup6 C T 4: 60,006,021 (GRCm39) T163I probably benign Het
Myo1g T A 11: 6,466,780 (GRCm39) I278F possibly damaging Het
Myo9a A T 9: 59,778,119 (GRCm39) K1292* probably null Het
Nbeal1 T A 1: 60,281,694 (GRCm39) probably benign Het
Nck1 C A 9: 100,379,440 (GRCm39) R270S probably benign Het
Neb T C 2: 52,060,548 (GRCm39) E6035G probably damaging Het
Nlrp4f A C 13: 65,343,357 (GRCm39) L96* probably null Het
Or11g1 A T 14: 50,651,910 (GRCm39) H303L probably benign Het
Or4a77 A T 2: 89,486,835 (GRCm39) probably benign Het
Or51l14 A T 7: 103,101,011 (GRCm39) I156F probably benign Het
Or5t18 A C 2: 86,636,769 (GRCm39) Y191* probably null Het
Padi2 A G 4: 140,659,541 (GRCm39) E282G probably damaging Het
Pcdhb4 A G 18: 37,441,803 (GRCm39) D371G probably damaging Het
Pcdhb8 A G 18: 37,489,978 (GRCm39) D552G probably damaging Het
Peli3 A G 19: 4,982,855 (GRCm39) I270T probably damaging Het
Phf20 A G 2: 156,118,516 (GRCm39) M407V probably benign Het
Ppm1h C T 10: 122,777,185 (GRCm39) R103* probably null Het
Rangap1 C T 15: 81,593,705 (GRCm39) V457M probably benign Het
Scube2 A G 7: 109,442,461 (GRCm39) V257A probably benign Het
Shc1 C A 3: 89,332,156 (GRCm39) Q204K probably damaging Het
Slc6a4 T A 11: 76,917,961 (GRCm39) Y568N probably damaging Het
Srgap3 A G 6: 112,923,439 (GRCm39) F7L probably benign Het
St6galnac4 T A 2: 32,484,098 (GRCm39) C99S probably damaging Het
Strc T C 2: 121,206,075 (GRCm39) D779G probably benign Het
Supt6 A T 11: 78,116,309 (GRCm39) Y685N probably damaging Het
Traf3ip3 T C 1: 192,869,418 (GRCm39) T256A probably benign Het
Vmn1r74 A T 7: 11,581,560 (GRCm39) I287F probably damaging Het
Zmym2 C A 14: 57,185,472 (GRCm39) Q1035K possibly damaging Het
Zswim3 G A 2: 164,663,440 (GRCm39) R640H probably damaging Het
Other mutations in Ccdc136
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00980:Ccdc136 APN 6 29,420,257 (GRCm39) missense probably damaging 0.96
IGL01325:Ccdc136 APN 6 29,412,949 (GRCm39) missense probably benign 0.00
IGL02305:Ccdc136 APN 6 29,406,173 (GRCm39) missense probably damaging 1.00
IGL03354:Ccdc136 APN 6 29,419,102 (GRCm39) missense probably damaging 1.00
dimensionless UTSW 6 29,412,449 (GRCm39) missense probably benign 0.03
punctate UTSW 6 29,410,204 (GRCm39) missense probably damaging 0.99
PIT4515001:Ccdc136 UTSW 6 29,417,225 (GRCm39) missense probably benign 0.42
R0436:Ccdc136 UTSW 6 29,414,933 (GRCm39) missense probably damaging 1.00
R0709:Ccdc136 UTSW 6 29,414,969 (GRCm39) missense possibly damaging 0.64
R1451:Ccdc136 UTSW 6 29,419,376 (GRCm39) missense probably benign 0.09
R1593:Ccdc136 UTSW 6 29,415,583 (GRCm39) missense probably damaging 1.00
R1966:Ccdc136 UTSW 6 29,418,091 (GRCm39) missense probably damaging 1.00
R2113:Ccdc136 UTSW 6 29,413,031 (GRCm39) missense possibly damaging 0.51
R3845:Ccdc136 UTSW 6 29,417,176 (GRCm39) missense probably benign 0.20
R4668:Ccdc136 UTSW 6 29,411,280 (GRCm39) missense probably damaging 0.99
R5037:Ccdc136 UTSW 6 29,417,122 (GRCm39) missense probably damaging 1.00
R5085:Ccdc136 UTSW 6 29,419,313 (GRCm39) missense probably damaging 1.00
R5314:Ccdc136 UTSW 6 29,417,497 (GRCm39) missense probably benign 0.07
R5340:Ccdc136 UTSW 6 29,411,859 (GRCm39) missense possibly damaging 0.84
R5702:Ccdc136 UTSW 6 29,412,981 (GRCm39) missense probably damaging 0.99
R6108:Ccdc136 UTSW 6 29,412,449 (GRCm39) missense probably benign 0.03
R6313:Ccdc136 UTSW 6 29,410,204 (GRCm39) missense probably damaging 0.99
R6640:Ccdc136 UTSW 6 29,412,959 (GRCm39) missense possibly damaging 0.95
R6765:Ccdc136 UTSW 6 29,405,940 (GRCm39) missense probably benign
R7910:Ccdc136 UTSW 6 29,420,033 (GRCm39) missense probably benign 0.08
R7914:Ccdc136 UTSW 6 29,419,306 (GRCm39) missense probably damaging 1.00
R8030:Ccdc136 UTSW 6 29,417,141 (GRCm39) missense probably benign 0.07
R8414:Ccdc136 UTSW 6 29,412,929 (GRCm39) missense probably damaging 1.00
R8925:Ccdc136 UTSW 6 29,406,109 (GRCm39) missense probably damaging 0.98
R8927:Ccdc136 UTSW 6 29,406,109 (GRCm39) missense probably damaging 0.98
R9147:Ccdc136 UTSW 6 29,418,070 (GRCm39) missense probably damaging 1.00
R9148:Ccdc136 UTSW 6 29,418,070 (GRCm39) missense probably damaging 1.00
R9255:Ccdc136 UTSW 6 29,409,237 (GRCm39) missense probably benign
R9279:Ccdc136 UTSW 6 29,421,982 (GRCm39) intron probably benign
R9364:Ccdc136 UTSW 6 29,405,960 (GRCm39) missense probably damaging 1.00
R9623:Ccdc136 UTSW 6 29,405,939 (GRCm39) missense probably benign 0.00
R9712:Ccdc136 UTSW 6 29,417,441 (GRCm39) missense probably benign
R9799:Ccdc136 UTSW 6 29,417,505 (GRCm39) missense probably damaging 1.00
X0025:Ccdc136 UTSW 6 29,409,242 (GRCm39) splice site probably null
Posted On 2013-12-09