Incidental Mutation 'IGL01548:Vmn2r12'
| ID |
93176 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Vmn2r12
|
| Ensembl Gene |
ENSMUSG00000090688 |
| Gene Name |
vomeronasal 2, receptor 12 |
| Synonyms |
Gm6769 |
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.070)
|
| Stock # |
IGL01548
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
5 |
| Chromosomal Location |
109233715-109245730 bp(-) (GRCm39) |
| Type of Mutation |
nonsense |
| DNA Base Change (assembly) |
A to C
at 109240893 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Tyrosine to Stop codon
at position 73
(Y73*)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000093612
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000095922]
|
| AlphaFold |
L7N217 |
| Predicted Effect |
probably null
Transcript: ENSMUST00000095922
AA Change: Y73*
|
| SMART Domains |
Protein: ENSMUSP00000093612
Gene: ENSMUSG00000090688
AA Change: Y73*
| Domain | Start | End | E-Value | Type |
|---|
|
signal peptide
|
1 |
19 |
N/A |
INTRINSIC |
|
Pfam:ANF_receptor
|
76 |
466 |
8.8e-30 |
PFAM |
|
Pfam:NCD3G
|
505 |
559 |
1.7e-18 |
PFAM |
|
Pfam:7tm_3
|
591 |
827 |
3.9e-54 |
PFAM |
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 76 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Acot3 |
C |
T |
12: 84,103,863 (GRCm39) |
T224I |
probably benign |
Het |
| Adamts18 |
C |
T |
8: 114,490,931 (GRCm39) |
G512E |
probably damaging |
Het |
| Atp4b |
A |
G |
8: 13,439,679 (GRCm39) |
I181T |
probably damaging |
Het |
| Bcl11a |
A |
G |
11: 24,113,346 (GRCm39) |
I230V |
probably benign |
Het |
| Cenpj |
C |
A |
14: 56,769,776 (GRCm39) |
V1138L |
probably benign |
Het |
| Cep78 |
A |
G |
19: 15,958,564 (GRCm39) |
|
probably benign |
Het |
| Clec2j |
T |
A |
6: 128,632,941 (GRCm39) |
|
noncoding transcript |
Het |
| Col5a3 |
T |
C |
9: 20,714,296 (GRCm39) |
|
probably benign |
Het |
| Cpne6 |
A |
T |
14: 55,750,183 (GRCm39) |
T105S |
probably damaging |
Het |
| Csmd1 |
A |
T |
8: 16,338,660 (GRCm39) |
Y482* |
probably null |
Het |
| Ctrl |
C |
A |
8: 106,659,890 (GRCm39) |
|
probably benign |
Het |
| Dhcr24 |
T |
A |
4: 106,431,068 (GRCm39) |
C252* |
probably null |
Het |
| Dnaaf9 |
T |
C |
2: 130,656,179 (GRCm39) |
N110D |
probably damaging |
Het |
| Dnah17 |
G |
A |
11: 117,989,438 (GRCm39) |
P1261S |
probably benign |
Het |
| Dnai2 |
T |
C |
11: 114,643,768 (GRCm39) |
L466P |
probably damaging |
Het |
| Dync2h1 |
A |
T |
9: 7,071,922 (GRCm39) |
F3036Y |
probably damaging |
Het |
| Eef1akmt2 |
A |
C |
7: 132,433,134 (GRCm39) |
S191A |
probably damaging |
Het |
| Fat4 |
G |
A |
3: 39,063,406 (GRCm39) |
C4454Y |
probably damaging |
Het |
| Fat4 |
T |
C |
3: 38,941,907 (GRCm39) |
S267P |
probably damaging |
Het |
| Frrs1 |
T |
C |
3: 116,678,834 (GRCm39) |
C219R |
probably damaging |
Het |
| Gabra6 |
T |
A |
11: 42,207,850 (GRCm39) |
Q207L |
probably damaging |
Het |
| Gm19668 |
A |
T |
10: 77,634,242 (GRCm39) |
C242* |
probably null |
Het |
| Gm2840 |
G |
A |
5: 96,322,136 (GRCm39) |
|
noncoding transcript |
Het |
| Gmcl1p1 |
G |
A |
X: 3,078,226 (GRCm39) |
G423S |
probably benign |
Het |
| Golim4 |
C |
T |
3: 75,815,432 (GRCm39) |
|
probably null |
Het |
| Gucy1b1 |
G |
T |
3: 81,942,169 (GRCm39) |
T530K |
probably damaging |
Het |
| Hacl1 |
A |
T |
14: 31,362,553 (GRCm39) |
D31E |
possibly damaging |
Het |
| Hectd4 |
A |
G |
5: 121,502,723 (GRCm39) |
T4276A |
possibly damaging |
Het |
| Henmt1 |
T |
C |
3: 108,850,095 (GRCm39) |
I26T |
probably damaging |
Het |
| Hspa1l |
G |
A |
17: 35,197,367 (GRCm39) |
A469T |
probably damaging |
Het |
| Htra3 |
T |
A |
5: 35,821,420 (GRCm39) |
|
probably null |
Het |
| Lrrc28 |
C |
A |
7: 67,278,042 (GRCm39) |
|
probably null |
Het |
| Mfhas1 |
T |
C |
8: 36,057,613 (GRCm39) |
L696P |
probably damaging |
Het |
| Mios |
A |
G |
6: 8,234,252 (GRCm39) |
K808E |
possibly damaging |
Het |
| Mtnr1b |
A |
G |
9: 15,774,496 (GRCm39) |
Y188H |
probably damaging |
Het |
| Myom1 |
A |
G |
17: 71,408,215 (GRCm39) |
|
probably benign |
Het |
| Naca |
A |
T |
10: 127,876,773 (GRCm39) |
|
probably benign |
Het |
| Nckap1l |
T |
A |
15: 103,371,147 (GRCm39) |
V213D |
probably benign |
Het |
| Ndufa6 |
C |
T |
15: 82,238,282 (GRCm39) |
V50M |
possibly damaging |
Het |
| Or4c35 |
T |
A |
2: 89,808,883 (GRCm39) |
F254I |
possibly damaging |
Het |
| Or5b111 |
A |
G |
19: 13,291,350 (GRCm39) |
F100L |
possibly damaging |
Het |
| Or5g23 |
A |
G |
2: 85,439,105 (GRCm39) |
W50R |
probably benign |
Het |
| Or8b56 |
A |
G |
9: 38,739,646 (GRCm39) |
T220A |
probably benign |
Het |
| Or8k53 |
T |
A |
2: 86,178,077 (GRCm39) |
Y11F |
possibly damaging |
Het |
| Osbpl1a |
T |
C |
18: 12,896,632 (GRCm39) |
Y311C |
probably damaging |
Het |
| Parp11 |
A |
C |
6: 127,468,562 (GRCm39) |
Y204S |
probably damaging |
Het |
| Pla2g4a |
A |
G |
1: 149,808,407 (GRCm39) |
|
probably null |
Het |
| Plec |
T |
C |
15: 76,073,458 (GRCm39) |
R519G |
probably benign |
Het |
| Ppp2r5c |
T |
A |
12: 110,534,261 (GRCm39) |
Y375N |
probably benign |
Het |
| Prss35 |
C |
A |
9: 86,637,327 (GRCm39) |
S32R |
probably benign |
Het |
| Prss57 |
C |
T |
10: 79,621,581 (GRCm39) |
|
probably benign |
Het |
| Ptprc |
A |
C |
1: 138,027,219 (GRCm39) |
|
probably null |
Het |
| Rims1 |
A |
G |
1: 22,577,683 (GRCm39) |
C188R |
probably damaging |
Het |
| Ripk4 |
G |
T |
16: 97,552,696 (GRCm39) |
Y144* |
probably null |
Het |
| Rpgrip1 |
A |
T |
14: 52,363,728 (GRCm39) |
|
probably benign |
Het |
| Rps6ka4 |
A |
G |
19: 6,809,691 (GRCm39) |
V378A |
probably benign |
Het |
| Rtf1 |
A |
G |
2: 119,542,589 (GRCm39) |
K298E |
probably benign |
Het |
| Sdk1 |
T |
C |
5: 142,071,520 (GRCm39) |
F1237L |
possibly damaging |
Het |
| Slc40a1 |
T |
C |
1: 45,948,652 (GRCm39) |
K543E |
probably benign |
Het |
| Slco1a8 |
A |
G |
6: 141,938,238 (GRCm39) |
I227T |
possibly damaging |
Het |
| Sorcs3 |
A |
T |
19: 48,782,607 (GRCm39) |
I1041F |
possibly damaging |
Het |
| Spata31e4 |
A |
G |
13: 50,854,414 (GRCm39) |
T91A |
probably benign |
Het |
| Spata31f3 |
T |
C |
4: 42,868,564 (GRCm39) |
E353G |
probably benign |
Het |
| Taok3 |
T |
C |
5: 117,410,262 (GRCm39) |
M818T |
probably benign |
Het |
| Tas2r119 |
T |
A |
15: 32,178,123 (GRCm39) |
F230I |
probably damaging |
Het |
| Tbc1d8 |
T |
C |
1: 39,420,385 (GRCm39) |
D716G |
probably damaging |
Het |
| Tfg |
A |
G |
16: 56,521,465 (GRCm39) |
S58P |
probably damaging |
Het |
| Thnsl1 |
A |
G |
2: 21,217,943 (GRCm39) |
I45V |
probably damaging |
Het |
| Tle1 |
A |
G |
4: 72,088,955 (GRCm39) |
L96P |
probably damaging |
Het |
| Tmem260 |
A |
C |
14: 48,717,782 (GRCm39) |
S276R |
possibly damaging |
Het |
| Utp20 |
A |
G |
10: 88,600,643 (GRCm39) |
S24P |
probably damaging |
Het |
| Vcam1 |
T |
C |
3: 115,909,600 (GRCm39) |
I576V |
probably benign |
Het |
| Vmn1r27 |
G |
T |
6: 58,192,538 (GRCm39) |
N105K |
probably benign |
Het |
| Vmn2r86 |
T |
C |
10: 130,282,151 (GRCm39) |
I822V |
probably benign |
Het |
| Wdr6 |
C |
T |
9: 108,452,096 (GRCm39) |
V596I |
possibly damaging |
Het |
| Zfp946 |
A |
T |
17: 22,673,643 (GRCm39) |
K132N |
possibly damaging |
Het |
|
| Other mutations in Vmn2r12 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00948:Vmn2r12
|
APN |
5 |
109,245,541 (GRCm39) |
missense |
possibly damaging |
0.47 |
|
IGL01096:Vmn2r12
|
APN |
5 |
109,234,125 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL01538:Vmn2r12
|
APN |
5 |
109,239,716 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL01762:Vmn2r12
|
APN |
5 |
109,234,430 (GRCm39) |
missense |
probably damaging |
0.99 |
|
IGL01860:Vmn2r12
|
APN |
5 |
109,240,025 (GRCm39) |
missense |
probably benign |
0.10 |
|
IGL02269:Vmn2r12
|
APN |
5 |
109,234,343 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02530:Vmn2r12
|
APN |
5 |
109,233,858 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02887:Vmn2r12
|
APN |
5 |
109,238,351 (GRCm39) |
missense |
probably benign |
0.03 |
|
IGL03265:Vmn2r12
|
APN |
5 |
109,239,936 (GRCm39) |
missense |
probably benign |
0.05 |
|
R0396:Vmn2r12
|
UTSW |
5 |
109,240,765 (GRCm39) |
missense |
probably benign |
0.00 |
|
R0497:Vmn2r12
|
UTSW |
5 |
109,239,755 (GRCm39) |
nonsense |
probably null |
|
|
R0529:Vmn2r12
|
UTSW |
5 |
109,240,714 (GRCm39) |
missense |
probably benign |
|
|
R0715:Vmn2r12
|
UTSW |
5 |
109,238,373 (GRCm39) |
missense |
probably benign |
0.10 |
|
R0742:Vmn2r12
|
UTSW |
5 |
109,234,281 (GRCm39) |
missense |
possibly damaging |
0.55 |
|
R0894:Vmn2r12
|
UTSW |
5 |
109,235,716 (GRCm39) |
critical splice donor site |
probably null |
|
|
R1173:Vmn2r12
|
UTSW |
5 |
109,240,720 (GRCm39) |
missense |
probably benign |
0.00 |
|
R1174:Vmn2r12
|
UTSW |
5 |
109,240,720 (GRCm39) |
missense |
probably benign |
0.00 |
|
R1259:Vmn2r12
|
UTSW |
5 |
109,239,763 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R1349:Vmn2r12
|
UTSW |
5 |
109,234,452 (GRCm39) |
missense |
probably benign |
0.00 |
|
R1388:Vmn2r12
|
UTSW |
5 |
109,240,840 (GRCm39) |
missense |
possibly damaging |
0.56 |
|
R1549:Vmn2r12
|
UTSW |
5 |
109,240,696 (GRCm39) |
missense |
probably benign |
0.06 |
|
R1766:Vmn2r12
|
UTSW |
5 |
109,239,910 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1781:Vmn2r12
|
UTSW |
5 |
109,239,594 (GRCm39) |
missense |
probably benign |
0.00 |
|
R1885:Vmn2r12
|
UTSW |
5 |
109,239,942 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2159:Vmn2r12
|
UTSW |
5 |
109,239,340 (GRCm39) |
missense |
probably benign |
0.02 |
|
R2420:Vmn2r12
|
UTSW |
5 |
109,234,398 (GRCm39) |
missense |
probably benign |
0.39 |
|
R2421:Vmn2r12
|
UTSW |
5 |
109,234,398 (GRCm39) |
missense |
probably benign |
0.39 |
|
R2422:Vmn2r12
|
UTSW |
5 |
109,234,398 (GRCm39) |
missense |
probably benign |
0.39 |
|
R2937:Vmn2r12
|
UTSW |
5 |
109,239,397 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2938:Vmn2r12
|
UTSW |
5 |
109,239,397 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R3898:Vmn2r12
|
UTSW |
5 |
109,238,370 (GRCm39) |
missense |
probably benign |
0.02 |
|
R4061:Vmn2r12
|
UTSW |
5 |
109,240,058 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
R4063:Vmn2r12
|
UTSW |
5 |
109,240,058 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
R4090:Vmn2r12
|
UTSW |
5 |
109,239,412 (GRCm39) |
missense |
probably benign |
0.06 |
|
R4297:Vmn2r12
|
UTSW |
5 |
109,239,830 (GRCm39) |
missense |
probably benign |
0.12 |
|
R4298:Vmn2r12
|
UTSW |
5 |
109,239,830 (GRCm39) |
missense |
probably benign |
0.12 |
|
R4299:Vmn2r12
|
UTSW |
5 |
109,239,830 (GRCm39) |
missense |
probably benign |
0.12 |
|
R4304:Vmn2r12
|
UTSW |
5 |
109,233,872 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4306:Vmn2r12
|
UTSW |
5 |
109,233,872 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4307:Vmn2r12
|
UTSW |
5 |
109,233,872 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4308:Vmn2r12
|
UTSW |
5 |
109,233,872 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4594:Vmn2r12
|
UTSW |
5 |
109,234,301 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4783:Vmn2r12
|
UTSW |
5 |
109,234,379 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4900:Vmn2r12
|
UTSW |
5 |
109,240,852 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4929:Vmn2r12
|
UTSW |
5 |
109,239,544 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4974:Vmn2r12
|
UTSW |
5 |
109,239,372 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5389:Vmn2r12
|
UTSW |
5 |
109,238,261 (GRCm39) |
missense |
probably benign |
0.00 |
|
R5431:Vmn2r12
|
UTSW |
5 |
109,239,684 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R5527:Vmn2r12
|
UTSW |
5 |
109,234,483 (GRCm39) |
nonsense |
probably null |
|
|
R5639:Vmn2r12
|
UTSW |
5 |
109,240,666 (GRCm39) |
missense |
probably benign |
0.06 |
|
R5753:Vmn2r12
|
UTSW |
5 |
109,239,670 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5797:Vmn2r12
|
UTSW |
5 |
109,233,736 (GRCm39) |
nonsense |
probably null |
|
|
R6142:Vmn2r12
|
UTSW |
5 |
109,240,763 (GRCm39) |
missense |
probably benign |
|
|
R6162:Vmn2r12
|
UTSW |
5 |
109,234,430 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R6176:Vmn2r12
|
UTSW |
5 |
109,233,866 (GRCm39) |
missense |
probably benign |
0.43 |
|
R6853:Vmn2r12
|
UTSW |
5 |
109,240,771 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7238:Vmn2r12
|
UTSW |
5 |
109,245,655 (GRCm39) |
missense |
possibly damaging |
0.81 |
|
R7341:Vmn2r12
|
UTSW |
5 |
109,239,811 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
R7341:Vmn2r12
|
UTSW |
5 |
109,234,113 (GRCm39) |
missense |
possibly damaging |
0.74 |
|
R7383:Vmn2r12
|
UTSW |
5 |
109,240,684 (GRCm39) |
missense |
probably benign |
0.19 |
|
R7740:Vmn2r12
|
UTSW |
5 |
109,239,615 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7749:Vmn2r12
|
UTSW |
5 |
109,233,920 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R7861:Vmn2r12
|
UTSW |
5 |
109,235,829 (GRCm39) |
missense |
probably benign |
0.00 |
|
R7908:Vmn2r12
|
UTSW |
5 |
109,234,307 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8128:Vmn2r12
|
UTSW |
5 |
109,239,747 (GRCm39) |
missense |
possibly damaging |
0.81 |
|
R8175:Vmn2r12
|
UTSW |
5 |
109,238,349 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R8234:Vmn2r12
|
UTSW |
5 |
109,234,074 (GRCm39) |
missense |
probably benign |
0.01 |
|
R8771:Vmn2r12
|
UTSW |
5 |
109,239,952 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
R8947:Vmn2r12
|
UTSW |
5 |
109,234,522 (GRCm39) |
missense |
possibly damaging |
0.64 |
|
R8991:Vmn2r12
|
UTSW |
5 |
109,234,033 (GRCm39) |
nonsense |
probably null |
|
|
R9116:Vmn2r12
|
UTSW |
5 |
109,233,885 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9122:Vmn2r12
|
UTSW |
5 |
109,240,910 (GRCm39) |
missense |
probably benign |
0.00 |
|
R9153:Vmn2r12
|
UTSW |
5 |
109,234,203 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9371:Vmn2r12
|
UTSW |
5 |
109,234,452 (GRCm39) |
missense |
probably benign |
0.00 |
|
R9375:Vmn2r12
|
UTSW |
5 |
109,233,986 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9524:Vmn2r12
|
UTSW |
5 |
109,239,823 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9587:Vmn2r12
|
UTSW |
5 |
109,239,322 (GRCm39) |
missense |
probably damaging |
0.99 |
|
Z1088:Vmn2r12
|
UTSW |
5 |
109,240,646 (GRCm39) |
missense |
probably benign |
|
|
Z1176:Vmn2r12
|
UTSW |
5 |
109,239,303 (GRCm39) |
missense |
probably benign |
0.01 |
|
| Posted On |
2013-12-09 |
Incidental Mutation