Incidental Mutation 'IGL01548:Pla2g4a'
| ID |
93238 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Pla2g4a
|
| Ensembl Gene |
ENSMUSG00000056220 |
| Gene Name |
phospholipase A2, group IVA (cytosolic, calcium-dependent) |
| Synonyms |
Type IV PLA2, cytosolic phospholipase A2, Pla2g4, cytosolic PLA2, cPLA2alpha, cPLA2 |
| Accession Numbers |
|
| Essential gene? |
Possibly non essential
(E-score: 0.290)
|
| Stock # |
IGL01548
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
1 |
| Chromosomal Location |
149829618-149961290 bp(-) (GRCm38) |
| Type of Mutation |
critical splice donor site (2 bp from exon) |
| DNA Base Change (assembly) |
A to G
at 149932656 bp (GRCm38)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000139851
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000070200]
[ENSMUST00000190507]
|
| AlphaFold |
P47713 |
| Predicted Effect |
probably null
Transcript: ENSMUST00000070200
|
| SMART Domains |
Protein: ENSMUSP00000070868
Gene: ENSMUSG00000056220
| Domain | Start | End | E-Value | Type |
|---|
|
C2
|
19 |
121 |
8.23e-17 |
SMART |
|
PLAc
|
117 |
668 |
N/A |
SMART |
|
Blast:PLAc
|
706 |
748 |
3e-10 |
BLAST |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000134676
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000142040
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000190507
|
| SMART Domains |
Protein: ENSMUSP00000139851
Gene: ENSMUSG00000056220
| Domain | Start | End | E-Value | Type |
|---|
|
C2
|
5 |
83 |
7.1e-10 |
SMART |
|
Blast:PLAc
|
89 |
149 |
5e-32 |
BLAST |
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: The protein encoded by this gene is a member of the phospholipase A2 group IV family. This enzyme hydrolyzes membrane phospholipids, thereby releasing the polyunsaturated fatty acid, arachidonic acid. Arachidonic acid is further metabolized into eicosanoids such as leukotrienes, thromboxanes and prostaglandins, that play important roles in regulating diverse biological processes such as inflammatory responses, membrane and actin dynamics, and tumorigenesis. A rise in intracellular calcium levels results in binding of calcium to the C2 domain of this protein, and triggers the translocation from the cytosol to intracellular membranes, including the Golgi apparatus. Disruption of this gene in mice led to decreased levels of eicosonaoids and platelet-activating factor, decreased allergic symptoms, and impaired reproductive ability in females. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Mar 2015]
PHENOTYPE: Mice homozygouse for disruptions in this gene display reduced allergic and autoimmune reactions. They also display an increased incidence of insulin and reduced female reproductive performance. [provided by MGI curators]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 76 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| 4930402H24Rik |
T |
C |
2: 130,814,259 (GRCm38) |
N110D |
probably damaging |
Het |
| Acot3 |
C |
T |
12: 84,057,089 (GRCm38) |
T224I |
probably benign |
Het |
| Adamts18 |
C |
T |
8: 113,764,299 (GRCm38) |
G512E |
probably damaging |
Het |
| Atp4b |
A |
G |
8: 13,389,679 (GRCm38) |
I181T |
probably damaging |
Het |
| Bcl11a |
A |
G |
11: 24,163,346 (GRCm38) |
I230V |
probably benign |
Het |
| Cenpj |
C |
A |
14: 56,532,319 (GRCm38) |
V1138L |
probably benign |
Het |
| Cep78 |
A |
G |
19: 15,981,200 (GRCm38) |
|
probably benign |
Het |
| Clec2j |
T |
A |
6: 128,655,978 (GRCm38) |
|
noncoding transcript |
Het |
| Col5a3 |
T |
C |
9: 20,803,000 (GRCm38) |
|
probably benign |
Het |
| Cpne6 |
A |
T |
14: 55,512,726 (GRCm38) |
T105S |
probably damaging |
Het |
| Csmd1 |
A |
T |
8: 16,288,646 (GRCm38) |
Y482* |
probably null |
Het |
| Ctrl |
C |
A |
8: 105,933,258 (GRCm38) |
|
probably benign |
Het |
| Dhcr24 |
T |
A |
4: 106,573,871 (GRCm38) |
C252* |
probably null |
Het |
| Dnah17 |
G |
A |
11: 118,098,612 (GRCm38) |
P1261S |
probably benign |
Het |
| Dnaic2 |
T |
C |
11: 114,752,942 (GRCm38) |
L466P |
probably damaging |
Het |
| Dync2h1 |
A |
T |
9: 7,071,922 (GRCm38) |
F3036Y |
probably damaging |
Het |
| Eef1akmt2 |
A |
C |
7: 132,831,405 (GRCm38) |
S191A |
probably damaging |
Het |
| Fam205c |
T |
C |
4: 42,868,564 (GRCm38) |
E353G |
probably benign |
Het |
| Fat4 |
T |
C |
3: 38,887,758 (GRCm38) |
S267P |
probably damaging |
Het |
| Fat4 |
G |
A |
3: 39,009,257 (GRCm38) |
C4454Y |
probably damaging |
Het |
| Frrs1 |
T |
C |
3: 116,885,185 (GRCm38) |
C219R |
probably damaging |
Het |
| Gabra6 |
T |
A |
11: 42,317,023 (GRCm38) |
Q207L |
probably damaging |
Het |
| Gm19668 |
A |
T |
10: 77,798,408 (GRCm38) |
C242* |
probably null |
Het |
| Gm2840 |
G |
A |
5: 96,174,277 (GRCm38) |
|
noncoding transcript |
Het |
| Gm6614 |
A |
G |
6: 141,992,512 (GRCm38) |
I227T |
possibly damaging |
Het |
| Gm8765 |
A |
G |
13: 50,700,378 (GRCm38) |
T91A |
probably benign |
Het |
| Gmcl1p1 |
G |
A |
X: 3,078,226 (GRCm38) |
G423S |
probably benign |
Het |
| Golim4 |
C |
T |
3: 75,908,125 (GRCm38) |
|
probably null |
Het |
| Gucy1b1 |
G |
T |
3: 82,034,862 (GRCm38) |
T530K |
probably damaging |
Het |
| Hacl1 |
A |
T |
14: 31,640,596 (GRCm38) |
D31E |
possibly damaging |
Het |
| Hectd4 |
A |
G |
5: 121,364,660 (GRCm38) |
T4276A |
possibly damaging |
Het |
| Henmt1 |
T |
C |
3: 108,942,779 (GRCm38) |
I26T |
probably damaging |
Het |
| Hspa1l |
G |
A |
17: 34,978,391 (GRCm38) |
A469T |
probably damaging |
Het |
| Htra3 |
T |
A |
5: 35,664,076 (GRCm38) |
|
probably null |
Het |
| Lrrc28 |
C |
A |
7: 67,628,294 (GRCm38) |
|
probably null |
Het |
| Mfhas1 |
T |
C |
8: 35,590,459 (GRCm38) |
L696P |
probably damaging |
Het |
| Mios |
A |
G |
6: 8,234,252 (GRCm38) |
K808E |
possibly damaging |
Het |
| Mtnr1b |
A |
G |
9: 15,863,200 (GRCm38) |
Y188H |
probably damaging |
Het |
| Myom1 |
A |
G |
17: 71,101,220 (GRCm38) |
|
probably benign |
Het |
| Naca |
A |
T |
10: 128,040,904 (GRCm38) |
|
probably benign |
Het |
| Nckap1l |
T |
A |
15: 103,462,720 (GRCm38) |
V213D |
probably benign |
Het |
| Ndufa6 |
C |
T |
15: 82,354,081 (GRCm38) |
V50M |
possibly damaging |
Het |
| Olfr1000 |
A |
G |
2: 85,608,761 (GRCm38) |
W50R |
probably benign |
Het |
| Olfr1055 |
T |
A |
2: 86,347,733 (GRCm38) |
Y11F |
possibly damaging |
Het |
| Olfr1260 |
T |
A |
2: 89,978,539 (GRCm38) |
F254I |
possibly damaging |
Het |
| Olfr1465 |
A |
G |
19: 13,313,986 (GRCm38) |
F100L |
possibly damaging |
Het |
| Olfr923 |
A |
G |
9: 38,828,350 (GRCm38) |
T220A |
probably benign |
Het |
| Osbpl1a |
T |
C |
18: 12,763,575 (GRCm38) |
Y311C |
probably damaging |
Het |
| Parp11 |
A |
C |
6: 127,491,599 (GRCm38) |
Y204S |
probably damaging |
Het |
| Plec |
T |
C |
15: 76,189,258 (GRCm38) |
R519G |
probably benign |
Het |
| Ppp2r5c |
T |
A |
12: 110,567,827 (GRCm38) |
Y375N |
probably benign |
Het |
| Prss35 |
C |
A |
9: 86,755,274 (GRCm38) |
S32R |
probably benign |
Het |
| Prss57 |
C |
T |
10: 79,785,747 (GRCm38) |
|
probably benign |
Het |
| Ptprc |
A |
C |
1: 138,099,481 (GRCm38) |
|
probably null |
Het |
| Rims1 |
A |
G |
1: 22,538,602 (GRCm38) |
C188R |
probably damaging |
Het |
| Ripk4 |
G |
T |
16: 97,751,496 (GRCm38) |
Y144* |
probably null |
Het |
| Rpgrip1 |
A |
T |
14: 52,126,271 (GRCm38) |
|
probably benign |
Het |
| Rps6ka4 |
A |
G |
19: 6,832,323 (GRCm38) |
V378A |
probably benign |
Het |
| Rtf1 |
A |
G |
2: 119,712,108 (GRCm38) |
K298E |
probably benign |
Het |
| Sdk1 |
T |
C |
5: 142,085,765 (GRCm38) |
F1237L |
possibly damaging |
Het |
| Slc40a1 |
T |
C |
1: 45,909,492 (GRCm38) |
K543E |
probably benign |
Het |
| Sorcs3 |
A |
T |
19: 48,794,168 (GRCm38) |
I1041F |
possibly damaging |
Het |
| Taok3 |
T |
C |
5: 117,272,197 (GRCm38) |
M818T |
probably benign |
Het |
| Tas2r119 |
T |
A |
15: 32,177,977 (GRCm38) |
F230I |
probably damaging |
Het |
| Tbc1d8 |
T |
C |
1: 39,381,304 (GRCm38) |
D716G |
probably damaging |
Het |
| Tfg |
A |
G |
16: 56,701,102 (GRCm38) |
S58P |
probably damaging |
Het |
| Thnsl1 |
A |
G |
2: 21,213,132 (GRCm38) |
I45V |
probably damaging |
Het |
| Tle1 |
A |
G |
4: 72,170,718 (GRCm38) |
L96P |
probably damaging |
Het |
| Tmem260 |
A |
C |
14: 48,480,325 (GRCm38) |
S276R |
possibly damaging |
Het |
| Utp20 |
A |
G |
10: 88,764,781 (GRCm38) |
S24P |
probably damaging |
Het |
| Vcam1 |
T |
C |
3: 116,115,951 (GRCm38) |
I576V |
probably benign |
Het |
| Vmn1r27 |
G |
T |
6: 58,215,553 (GRCm38) |
N105K |
probably benign |
Het |
| Vmn2r12 |
A |
C |
5: 109,093,027 (GRCm38) |
Y73* |
probably null |
Het |
| Vmn2r86 |
T |
C |
10: 130,446,282 (GRCm38) |
I822V |
probably benign |
Het |
| Wdr6 |
C |
T |
9: 108,574,897 (GRCm38) |
V596I |
possibly damaging |
Het |
| Zfp946 |
A |
T |
17: 22,454,662 (GRCm38) |
K132N |
possibly damaging |
Het |
|
| Other mutations in Pla2g4a |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00660:Pla2g4a
|
APN |
1 |
149,886,203 (GRCm38) |
missense |
probably benign |
0.08 |
|
IGL00763:Pla2g4a
|
APN |
1 |
149,851,325 (GRCm38) |
missense |
probably damaging |
1.00 |
|
IGL01683:Pla2g4a
|
APN |
1 |
149,857,654 (GRCm38) |
missense |
probably benign |
0.05 |
|
IGL01903:Pla2g4a
|
APN |
1 |
149,840,619 (GRCm38) |
missense |
possibly damaging |
0.51 |
|
IGL02049:Pla2g4a
|
APN |
1 |
149,861,096 (GRCm38) |
missense |
probably benign |
0.12 |
|
IGL02103:Pla2g4a
|
APN |
1 |
149,901,199 (GRCm38) |
missense |
probably damaging |
0.99 |
|
IGL03132:Pla2g4a
|
APN |
1 |
149,902,284 (GRCm38) |
splice site |
probably benign |
|
|
IGL03299:Pla2g4a
|
APN |
1 |
149,851,367 (GRCm38) |
missense |
probably damaging |
1.00 |
|
IGL03302:Pla2g4a
|
APN |
1 |
149,864,947 (GRCm38) |
missense |
probably benign |
0.00 |
|
R0110:Pla2g4a
|
UTSW |
1 |
149,840,647 (GRCm38) |
missense |
possibly damaging |
0.67 |
|
R0469:Pla2g4a
|
UTSW |
1 |
149,840,647 (GRCm38) |
missense |
possibly damaging |
0.67 |
|
R0488:Pla2g4a
|
UTSW |
1 |
149,871,445 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R0606:Pla2g4a
|
UTSW |
1 |
149,840,704 (GRCm38) |
missense |
probably benign |
0.44 |
|
R1468:Pla2g4a
|
UTSW |
1 |
149,887,593 (GRCm38) |
splice site |
probably benign |
|
|
R1470:Pla2g4a
|
UTSW |
1 |
149,840,720 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R1470:Pla2g4a
|
UTSW |
1 |
149,840,720 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R1521:Pla2g4a
|
UTSW |
1 |
149,857,686 (GRCm38) |
critical splice acceptor site |
probably null |
|
|
R1718:Pla2g4a
|
UTSW |
1 |
149,871,523 (GRCm38) |
splice site |
probably benign |
|
|
R1778:Pla2g4a
|
UTSW |
1 |
149,902,445 (GRCm38) |
splice site |
probably benign |
|
|
R1967:Pla2g4a
|
UTSW |
1 |
149,922,081 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R2063:Pla2g4a
|
UTSW |
1 |
149,840,676 (GRCm38) |
missense |
possibly damaging |
0.94 |
|
R2291:Pla2g4a
|
UTSW |
1 |
149,901,189 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R3855:Pla2g4a
|
UTSW |
1 |
149,830,177 (GRCm38) |
missense |
possibly damaging |
0.86 |
|
R4512:Pla2g4a
|
UTSW |
1 |
149,861,051 (GRCm38) |
splice site |
probably null |
|
|
R4568:Pla2g4a
|
UTSW |
1 |
149,842,226 (GRCm38) |
missense |
probably benign |
0.43 |
|
R5266:Pla2g4a
|
UTSW |
1 |
149,865,167 (GRCm38) |
missense |
possibly damaging |
0.79 |
|
R5855:Pla2g4a
|
UTSW |
1 |
149,880,063 (GRCm38) |
missense |
probably damaging |
0.99 |
|
R5897:Pla2g4a
|
UTSW |
1 |
149,865,148 (GRCm38) |
missense |
probably damaging |
0.99 |
|
R6012:Pla2g4a
|
UTSW |
1 |
149,932,677 (GRCm38) |
missense |
possibly damaging |
0.55 |
|
R6193:Pla2g4a
|
UTSW |
1 |
149,902,430 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R6246:Pla2g4a
|
UTSW |
1 |
149,872,587 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R6248:Pla2g4a
|
UTSW |
1 |
149,872,587 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R6258:Pla2g4a
|
UTSW |
1 |
149,857,487 (GRCm38) |
missense |
probably benign |
0.00 |
|
R6260:Pla2g4a
|
UTSW |
1 |
149,857,487 (GRCm38) |
missense |
probably benign |
0.00 |
|
R6293:Pla2g4a
|
UTSW |
1 |
149,880,047 (GRCm38) |
missense |
probably damaging |
0.98 |
|
R6310:Pla2g4a
|
UTSW |
1 |
149,842,226 (GRCm38) |
missense |
possibly damaging |
0.88 |
|
R6490:Pla2g4a
|
UTSW |
1 |
149,851,335 (GRCm38) |
nonsense |
probably null |
|
|
R6502:Pla2g4a
|
UTSW |
1 |
149,872,616 (GRCm38) |
nonsense |
probably null |
|
|
R6614:Pla2g4a
|
UTSW |
1 |
149,842,235 (GRCm38) |
missense |
probably benign |
0.07 |
|
R6671:Pla2g4a
|
UTSW |
1 |
149,887,631 (GRCm38) |
missense |
probably benign |
|
|
R6745:Pla2g4a
|
UTSW |
1 |
149,886,230 (GRCm38) |
missense |
probably benign |
0.07 |
|
R6880:Pla2g4a
|
UTSW |
1 |
149,851,451 (GRCm38) |
missense |
possibly damaging |
0.90 |
|
R7058:Pla2g4a
|
UTSW |
1 |
149,851,352 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R7163:Pla2g4a
|
UTSW |
1 |
149,840,665 (GRCm38) |
nonsense |
probably null |
|
|
R7422:Pla2g4a
|
UTSW |
1 |
149,932,687 (GRCm38) |
missense |
probably benign |
0.32 |
|
R7454:Pla2g4a
|
UTSW |
1 |
149,872,690 (GRCm38) |
missense |
possibly damaging |
0.63 |
|
R7474:Pla2g4a
|
UTSW |
1 |
149,865,200 (GRCm38) |
missense |
possibly damaging |
0.88 |
|
R7514:Pla2g4a
|
UTSW |
1 |
149,851,362 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R7536:Pla2g4a
|
UTSW |
1 |
149,880,017 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R7682:Pla2g4a
|
UTSW |
1 |
149,886,271 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R7744:Pla2g4a
|
UTSW |
1 |
149,861,102 (GRCm38) |
missense |
probably benign |
0.06 |
|
R7766:Pla2g4a
|
UTSW |
1 |
149,861,058 (GRCm38) |
missense |
probably benign |
0.00 |
|
R7783:Pla2g4a
|
UTSW |
1 |
149,872,744 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R8031:Pla2g4a
|
UTSW |
1 |
149,901,213 (GRCm38) |
missense |
possibly damaging |
0.87 |
|
R8145:Pla2g4a
|
UTSW |
1 |
149,840,643 (GRCm38) |
missense |
probably benign |
0.42 |
|
R8189:Pla2g4a
|
UTSW |
1 |
149,857,586 (GRCm38) |
missense |
probably benign |
0.04 |
|
R8252:Pla2g4a
|
UTSW |
1 |
149,851,307 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R8315:Pla2g4a
|
UTSW |
1 |
149,886,214 (GRCm38) |
missense |
probably benign |
0.02 |
|
R8762:Pla2g4a
|
UTSW |
1 |
149,886,184 (GRCm38) |
missense |
probably benign |
0.00 |
|
R8783:Pla2g4a
|
UTSW |
1 |
149,864,990 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R8838:Pla2g4a
|
UTSW |
1 |
149,871,505 (GRCm38) |
missense |
probably benign |
0.00 |
|
R9132:Pla2g4a
|
UTSW |
1 |
149,871,479 (GRCm38) |
missense |
probably benign |
0.01 |
|
R9282:Pla2g4a
|
UTSW |
1 |
149,871,456 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R9412:Pla2g4a
|
UTSW |
1 |
149,880,021 (GRCm38) |
missense |
probably damaging |
0.99 |
|
X0021:Pla2g4a
|
UTSW |
1 |
149,864,926 (GRCm38) |
missense |
possibly damaging |
0.66 |
|
Z1177:Pla2g4a
|
UTSW |
1 |
149,871,434 (GRCm38) |
missense |
probably damaging |
1.00 |
|
| Posted On |
2013-12-09 |
Incidental Mutation