Mutagenetix > Incidental Mutation

Incidental Mutation 'R1054:Eif3f'

94191

Institutional Source

Beutler Lab

Gene Symbol

Eif3f

Ensembl Gene

ENSMUSG00000031029

Gene Name

eukaryotic translation initiation factor 3, subunit F

Synonyms

Eif3s5, 0610037M02Rik

MMRRC Submission

039144-MU

Accession Numbers

Essential gene?

Probably essential (E-score: 0.965) question?

Stock #

R1054 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

108533622-108541149 bp(+) (GRCm39)

Type of Mutation

critical splice donor site (1 bp from exon)

DNA Base Change (assembly)

G to A at 108537024 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Ref Sequence

ENSEMBL: ENSMUSP00000033342 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000033342]

AlphaFold

Q9DCH4

Predicted Effect

probably null
Transcript: ENSMUST00000033342

SMART Domains

Protein: ENSMUSP00000033342
Gene: ENSMUSG00000031029

Domain	Start	End	E-Value	Type
low complexity region	2	93	N/A	INTRINSIC
JAB_MPN	95	225	3.11e-42	SMART
Pfam:MitMem_reg	247	359	7e-27	PFAM

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000147369

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000153596

Coding Region Coverage

1x: 99.2%
3x: 98.4%
10x: 96.7%
20x: 93.9%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 46 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Arhgap39	T	C	15: 76,635,759 (GRCm39)	T159A	probably benign	Het
Arhgef38	T	C	3: 132,822,226 (GRCm39)	Y763C	probably damaging	Het
Arv1	T	A	8: 125,458,611 (GRCm39)	F245Y	probably benign	Het
Ccdc175	A	G	12: 72,225,318 (GRCm39)	I113T	possibly damaging	Het
Cdc42bpb	A	T	12: 111,279,787 (GRCm39)	M932K	probably benign	Het
Cdh15	T	C	8: 123,591,076 (GRCm39)	F442L	possibly damaging	Het
Col28a1	C	T	6: 8,175,534 (GRCm39)	D105N	probably damaging	Het
Cpne4	A	G	9: 104,899,600 (GRCm39)	T428A	probably benign	Het
Cramp1	T	A	17: 25,202,151 (GRCm39)	I444F	probably damaging	Het
Dhx32	T	A	7: 133,327,001 (GRCm39)	K360M	probably damaging	Het
Dna2	T	A	10: 62,799,602 (GRCm39)	C669S	possibly damaging	Het
Dusp8	ACTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTGCTGCTGC	ACTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTGCTGCTGC	7: 141,635,804 (GRCm39)		probably benign	Het
Elmod1	T	C	9: 53,820,058 (GRCm39)	D310G	probably benign	Het
Fn1	A	G	1: 71,625,373 (GRCm39)	*2272Q	probably null	Het
Gnat1	A	G	9: 107,554,638 (GRCm39)	S76P	probably damaging	Het
Gtf2f2	T	C	14: 76,232,885 (GRCm39)	T94A	probably benign	Het
Hacd4	A	T	4: 88,341,264 (GRCm39)	W152R	probably damaging	Het
Kcnh8	A	G	17: 53,110,512 (GRCm39)	Y241C	probably damaging	Het
Lepr	T	C	4: 101,639,793 (GRCm39)	I753T	probably damaging	Het
Med12l	C	T	3: 59,156,072 (GRCm39)	H1162Y	probably damaging	Het
Med25	C	T	7: 44,529,804 (GRCm39)	A485T	probably benign	Het
Mup5	A	T	4: 61,750,871 (GRCm39)	S145R	probably benign	Het
Myo1g	A	G	11: 6,468,987 (GRCm39)	V105A	probably damaging	Het
Npc2	A	G	12: 84,807,492 (GRCm39)		probably null	Het
Or52h1	A	G	7: 103,829,498 (GRCm39)	I39T	probably benign	Het
Or6p1	A	G	1: 174,258,419 (GRCm39)	T142A	probably benign	Het
Otulinl	T	C	15: 27,664,635 (GRCm39)	R79G	probably damaging	Het
Pdzd2	A	G	15: 12,371,725 (GRCm39)	S2557P	probably damaging	Het
Pop1	T	C	15: 34,509,955 (GRCm39)	V353A	probably benign	Het
Pou3f2	A	G	4: 22,487,536 (GRCm39)	V199A	possibly damaging	Het
Pramel18	A	G	4: 101,766,361 (GRCm39)	E15G	probably benign	Het
Ptprm	A	T	17: 67,349,313 (GRCm39)	N43K	probably damaging	Het
Qrsl1	C	T	10: 43,758,077 (GRCm39)	D339N	probably damaging	Het
Rpl13-ps3	C	A	14: 59,131,394 (GRCm39)		noncoding transcript	Het
Sdk2	C	T	11: 113,729,472 (GRCm39)		silent	Het
Sdr16c6	A	G	4: 4,069,908 (GRCm39)	V144A	probably damaging	Het
Spata31d1b	C	A	13: 59,865,332 (GRCm39)	H827N	probably damaging	Het
Spata31e4	T	C	13: 50,856,432 (GRCm39)	V690A	probably benign	Het
Taf4b	T	A	18: 14,954,530 (GRCm39)	H535Q	probably benign	Het
Timmdc1	A	G	16: 38,342,790 (GRCm39)	V36A	probably benign	Het
Tmem74b	C	T	2: 151,548,339 (GRCm39)	A22V	probably benign	Het
Txnrd3	T	A	6: 89,627,543 (GRCm39)	Y65*	probably null	Het
Vmn1r200	T	A	13: 22,579,624 (GRCm39)	S133R	probably damaging	Het
Vwf	G	A	6: 125,567,190 (GRCm39)	C311Y	probably damaging	Het
Wipf2	G	A	11: 98,787,141 (GRCm39)	R390H	possibly damaging	Het
Zfp282	T	A	6: 47,881,533 (GRCm39)	S407T	probably benign	Het

Other mutations in Eif3f

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL02690:Eif3f	APN	7	108,533,925 (GRCm39)	missense	probably damaging	1.00
IGL02821:Eif3f	APN	7	108,533,882 (GRCm39)	unclassified	probably benign
IGL02821:Eif3f	APN	7	108,533,881 (GRCm39)	unclassified	probably benign
R0010:Eif3f	UTSW	7	108,540,212 (GRCm39)	missense	possibly damaging	0.93
R1886:Eif3f	UTSW	7	108,539,958 (GRCm39)	missense	probably benign	0.08
R2877:Eif3f	UTSW	7	108,534,019 (GRCm39)	splice site	probably null
R3700:Eif3f	UTSW	7	108,539,482 (GRCm39)	missense	probably benign	0.23
R3882:Eif3f	UTSW	7	108,540,162 (GRCm39)	missense	possibly damaging	0.88
R4471:Eif3f	UTSW	7	108,540,153 (GRCm39)	missense	possibly damaging	0.79
R4472:Eif3f	UTSW	7	108,540,153 (GRCm39)	missense	possibly damaging	0.79
R4817:Eif3f	UTSW	7	108,536,982 (GRCm39)	missense	probably damaging	0.99
R4953:Eif3f	UTSW	7	108,533,847 (GRCm39)	unclassified	probably benign
R5744:Eif3f	UTSW	7	108,537,624 (GRCm39)	missense	probably damaging	0.99
R7162:Eif3f	UTSW	7	108,539,938 (GRCm39)	missense	probably benign	0.02
R7235:Eif3f	UTSW	7	108,537,295 (GRCm39)	missense	possibly damaging	0.78
R7445:Eif3f	UTSW	7	108,533,865 (GRCm39)	missense	unknown
R9077:Eif3f	UTSW	7	108,539,425 (GRCm39)	missense	probably benign	0.00

Predicted Primers

PCR Primer
(F):5'- TGACTTTGAGGCCATCTCCAAAAGC -3'
(R):5'- TCCATGTCAACAGCCACCTAAGGG -3'

Sequencing Primer
(F):5'- attcactctccagcaccac -3'
(R):5'- CCACCTAAGGGGGAAGGC -3'

Posted On

2014-01-05