Incidental Mutation 'R1054:Vmn1r200'
ID94215
Institutional Source Beutler Lab
Gene Symbol Vmn1r200
Ensembl Gene ENSMUSG00000101073
Gene Namevomeronasal 1 receptor 200
SynonymsV1rh3
MMRRC Submission 039144-MU
Accession Numbers
Is this an essential gene? Probably non essential (E-score: 0.124) question?
Stock #R1054 (G1)
Quality Score225
Status Not validated
Chromosome13
Chromosomal Location22390373-22400052 bp(+) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) T to A at 22395454 bp
ZygosityHeterozygous
Amino Acid Change Serine to Arginine at position 133 (S133R)
Ref Sequence ENSEMBL: ENSMUSP00000153883 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000074324] [ENSMUST00000226157] [ENSMUST00000227326] [ENSMUST00000228726]
Predicted Effect probably damaging
Transcript: ENSMUST00000074324
AA Change: S142R

PolyPhen 2 Score 0.988 (Sensitivity: 0.73; Specificity: 0.96)
SMART Domains Protein: ENSMUSP00000073934
Gene: ENSMUSG00000101073
AA Change: S142R

DomainStartEndE-ValueType
Pfam:V1R 24 307 5.5e-36 PFAM
Predicted Effect probably damaging
Transcript: ENSMUST00000091731
AA Change: S142R

PolyPhen 2 Score 0.988 (Sensitivity: 0.73; Specificity: 0.96)
SMART Domains Protein: ENSMUSP00000089325
Gene: ENSMUSG00000069291
AA Change: S142R

DomainStartEndE-ValueType
Pfam:TAS2R 2 291 1.3e-8 PFAM
Pfam:V1R 34 297 3.8e-37 PFAM
Predicted Effect probably damaging
Transcript: ENSMUST00000226157
AA Change: S142R

PolyPhen 2 Score 0.988 (Sensitivity: 0.73; Specificity: 0.96)
Predicted Effect noncoding transcript
Transcript: ENSMUST00000226901
Predicted Effect probably damaging
Transcript: ENSMUST00000227326
AA Change: S133R

PolyPhen 2 Score 0.996 (Sensitivity: 0.55; Specificity: 0.98)
Predicted Effect probably damaging
Transcript: ENSMUST00000228726
AA Change: S142R

PolyPhen 2 Score 0.988 (Sensitivity: 0.73; Specificity: 0.96)
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.4%
  • 10x: 96.7%
  • 20x: 93.9%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 46 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Arhgap39 T C 15: 76,751,559 T159A probably benign Het
Arhgef38 T C 3: 133,116,465 Y763C probably damaging Het
Arv1 T A 8: 124,731,872 F245Y probably benign Het
Ccdc175 A G 12: 72,178,544 I113T possibly damaging Het
Cdc42bpb A T 12: 111,313,353 M932K probably benign Het
Cdh15 T C 8: 122,864,337 F442L possibly damaging Het
Col28a1 C T 6: 8,175,534 D105N probably damaging Het
Cpne4 A G 9: 105,022,401 T428A probably benign Het
Cramp1l T A 17: 24,983,177 I444F probably damaging Het
Dhx32 T A 7: 133,725,272 K360M probably damaging Het
Dna2 T A 10: 62,963,823 C669S possibly damaging Het
Dusp8 ACTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTGCTGCTGC ACTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTGCTGCTGC 7: 142,082,067 probably benign Het
Eif3f G A 7: 108,937,817 probably null Het
Elmod1 T C 9: 53,912,774 D310G probably benign Het
Fam105a T C 15: 27,664,549 R79G probably damaging Het
Fn1 A G 1: 71,586,214 *2272Q probably null Het
Gm12800 A G 4: 101,909,164 E15G probably benign Het
Gm8765 T C 13: 50,702,396 V690A probably benign Het
Gnat1 A G 9: 107,677,439 S76P probably damaging Het
Gtf2f2 T C 14: 75,995,445 T94A probably benign Het
Hacd4 A T 4: 88,423,027 W152R probably damaging Het
Kcnh8 A G 17: 52,803,484 Y241C probably damaging Het
Lepr T C 4: 101,782,596 I753T probably damaging Het
Med12l C T 3: 59,248,651 H1162Y probably damaging Het
Med25 C T 7: 44,880,380 A485T probably benign Het
Mup5 A T 4: 61,832,634 S145R probably benign Het
Myo1g A G 11: 6,518,987 V105A probably damaging Het
Npc2 A G 12: 84,760,718 probably null Het
Olfr414 A G 1: 174,430,853 T142A probably benign Het
Olfr648 A G 7: 104,180,291 I39T probably benign Het
Pdzd2 A G 15: 12,371,639 S2557P probably damaging Het
Pop1 T C 15: 34,509,809 V353A probably benign Het
Pou3f2 A G 4: 22,487,536 V199A possibly damaging Het
Ptprm A T 17: 67,042,318 N43K probably damaging Het
Qrsl1 C T 10: 43,882,081 D339N probably damaging Het
Rpl13-ps3 C A 14: 58,893,945 noncoding transcript Het
Sdk2 C T 11: 113,838,646 silent Het
Sdr16c6 A G 4: 4,069,908 V144A probably damaging Het
Spata31d1b C A 13: 59,717,518 H827N probably damaging Het
Taf4b T A 18: 14,821,473 H535Q probably benign Het
Timmdc1 A G 16: 38,522,428 V36A probably benign Het
Tmem74b C T 2: 151,706,419 A22V probably benign Het
Txnrd3 T A 6: 89,650,561 Y65* probably null Het
Vwf G A 6: 125,590,227 C311Y probably damaging Het
Wipf2 G A 11: 98,896,315 R390H possibly damaging Het
Zfp282 T A 6: 47,904,599 S407T probably benign Het
Other mutations in Vmn1r200
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00970:Vmn1r200 APN 13 22395723 missense probably damaging 1.00
IGL01123:Vmn1r200 APN 13 22395401 missense probably benign 0.01
IGL01943:Vmn1r200 APN 13 22395927 missense possibly damaging 0.77
IGL02691:Vmn1r200 APN 13 22395258 missense probably damaging 1.00
R0491:Vmn1r200 UTSW 13 22395191 missense probably benign 0.00
R0507:Vmn1r200 UTSW 13 22395548 missense probably benign 0.00
R0530:Vmn1r200 UTSW 13 22395497 missense probably damaging 1.00
R1033:Vmn1r200 UTSW 13 22395890 missense probably damaging 1.00
R1714:Vmn1r200 UTSW 13 22395470 missense possibly damaging 0.96
R1920:Vmn1r200 UTSW 13 22395493 missense probably damaging 1.00
R2118:Vmn1r200 UTSW 13 22395183 missense probably damaging 1.00
R3784:Vmn1r200 UTSW 13 22395855 missense possibly damaging 0.82
R4827:Vmn1r200 UTSW 13 22395095 missense probably benign 0.00
R5285:Vmn1r200 UTSW 13 22395287 missense possibly damaging 0.51
R5299:Vmn1r200 UTSW 13 22395775 nonsense probably null
R6127:Vmn1r200 UTSW 13 22395203 missense probably benign 0.07
R7167:Vmn1r200 UTSW 13 22395317 missense possibly damaging 0.91
R7854:Vmn1r200 UTSW 13 22395839 missense probably benign 0.08
R7977:Vmn1r200 UTSW 13 22395855 missense possibly damaging 0.82
R7987:Vmn1r200 UTSW 13 22395855 missense possibly damaging 0.82
R8061:Vmn1r200 UTSW 13 22395283 nonsense probably null
R8208:Vmn1r200 UTSW 13 22395300 missense probably damaging 0.99
Predicted Primers PCR Primer
(F):5'- TCCATGACAGTGCTTGGCACTC -3'
(R):5'- GGCACTCTGAAACACTGCATCTCTC -3'

Sequencing Primer
(F):5'- AACTTCCTGGATGACATAGGCTG -3'
(R):5'- TGAAACACTGCATCTCTCATGAC -3'
Posted On2014-01-05