Mutagenetix > Incidental Mutation

Incidental Mutation 'R1061:Or55b4'

94476

Institutional Source

Beutler Lab

Gene Symbol

Or55b4

Ensembl Gene

ENSMUSG00000043925

Gene Name

olfactory receptor family 55 subfamily B member 4

Synonyms

Olfr544, MOR42-3, GA_x6K02T2PBJ9-5206624-5205620

MMRRC Submission

039147-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.080) question?

Stock #

R1061 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

102133321-102137514 bp(-) (GRCm39)

Type of Mutation

makesense

DNA Base Change (assembly)

T to A at 102133321 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Stop codon to Cysteine at position 335 (*335C)

Ref Sequence

ENSEMBL: ENSMUSP00000051280 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000051201] [ENSMUST00000219647]

AlphaFold

E9PX47

Predicted Effect

probably null
Transcript: ENSMUST00000051201
AA Change: *335C

SMART Domains

Protein: ENSMUSP00000051280
Gene: ENSMUSG00000043925
AA Change: *335C

Domain	Start	End	E-Value	Type
Pfam:7tm_4	35	314	1.2e-73	PFAM
Pfam:7TM_GPCR_Srsx	39	311	6.3e-8	PFAM
Pfam:7tm_1	45	296	2.4e-14	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000219647

Coding Region Coverage

1x: 99.1%
3x: 98.3%
10x: 96.4%
20x: 93.1%

Validation Efficiency

MGI Phenotype

FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

Allele List at MGI

Other mutations in this stock

Total: 63 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abcb11	C	T	2: 69,108,153 (GRCm39)	A715T	probably benign	Het
Ampd2	A	G	3: 107,983,005 (GRCm39)	Y641H	probably damaging	Het
Aqp4	A	T	18: 15,531,248 (GRCm39)	V171E	probably damaging	Het
Arid4a	T	A	12: 71,121,729 (GRCm39)	S381R	probably damaging	Het
Armc8	T	G	9: 99,419,784 (GRCm39)	N51H	probably damaging	Het
Asic5	T	A	3: 81,928,308 (GRCm39)	Y424N	probably damaging	Het
Bcl11a	A	T	11: 24,114,069 (GRCm39)	K471*	probably null	Het
Birc6	A	G	17: 74,996,307 (GRCm39)	T4494A	probably damaging	Het
Btbd9	A	G	17: 30,746,409 (GRCm39)	I139T	probably benign	Het
Ccdc60	C	A	5: 116,310,527 (GRCm39)	R178S	possibly damaging	Het
Cd163	C	T	6: 124,286,128 (GRCm39)	A226V	probably benign	Het
Cibar2	C	A	8: 120,896,443 (GRCm39)		probably null	Het
Cog1	T	G	11: 113,542,863 (GRCm39)	S170A	probably benign	Het
Cwc15	T	C	9: 14,419,211 (GRCm39)	L169P	probably damaging	Het
Cyp3a25	A	T	5: 145,923,643 (GRCm39)	D333E	probably benign	Het
Ddc	C	T	11: 11,779,132 (GRCm39)	V331I	probably benign	Het
Dlc1	T	A	8: 37,325,205 (GRCm39)	T367S	probably benign	Het
Dnah17	T	C	11: 117,943,514 (GRCm39)	D3183G	possibly damaging	Het
Eif2a	T	A	3: 58,452,486 (GRCm39)	Y165*	probably null	Het
Eml6	T	C	11: 29,727,267 (GRCm39)	D1285G	probably damaging	Het
Fasn	T	C	11: 120,713,008 (GRCm39)		probably null	Het
Fbn1	T	C	2: 125,187,883 (GRCm39)	T1549A	probably benign	Het
Fezf2	T	C	14: 12,342,713 (GRCm38)	Y384C	probably damaging	Het
Flvcr1	A	T	1: 190,740,370 (GRCm39)	V550E	probably benign	Het
Gcm2	A	G	13: 41,259,347 (GRCm39)	W41R	probably damaging	Het
Gli2	A	T	1: 118,782,247 (GRCm39)	M160K	possibly damaging	Het
Gpr61	C	T	3: 108,057,623 (GRCm39)	R346H	probably damaging	Het
Hoxa5	A	T	6: 52,181,135 (GRCm39)	S66T	probably benign	Het
Hsph1	A	T	5: 149,541,883 (GRCm39)	V781D	possibly damaging	Het
Kdm3b	G	A	18: 34,929,915 (GRCm39)	V220M	probably damaging	Het
Klhl25	T	A	7: 75,516,268 (GRCm39)	Y391*	probably null	Het
Mc2r	A	T	18: 68,540,880 (GRCm39)	Y138N	probably damaging	Het
Mtap	C	A	4: 89,074,821 (GRCm39)	D106E	probably benign	Het
Nup43	G	T	10: 7,543,435 (GRCm39)	W37L	probably damaging	Het
Nxpe2	T	A	9: 48,237,663 (GRCm39)	E197D	probably damaging	Het
Odad1	T	C	7: 45,591,179 (GRCm39)	I218T	probably damaging	Het
Or10d1c	C	A	9: 38,893,779 (GRCm39)	C187F	probably damaging	Het
Or5p60	T	C	7: 107,723,663 (GRCm39)	Y269C	probably damaging	Het
Or8h8	A	T	2: 86,753,126 (GRCm39)	V250D	possibly damaging	Het
Pitrm1	A	G	13: 6,605,611 (GRCm39)	H186R	probably damaging	Het
Pklr	C	T	3: 89,052,188 (GRCm39)	R467C	probably damaging	Het
Plxna2	A	G	1: 194,326,401 (GRCm39)	N112D	probably damaging	Het
Ppp1r16a	C	T	15: 76,577,869 (GRCm39)	Q328*	probably null	Het
Ppp3cb	A	C	14: 20,558,682 (GRCm39)		probably null	Het
R3hcc1l	C	T	19: 42,571,865 (GRCm39)	R135*	probably null	Het
Ralyl	A	C	3: 14,180,761 (GRCm39)	D68A	probably damaging	Het
Rif1	GCCACCA	GCCA	2: 52,000,336 (GRCm39)		probably benign	Het
S100a1	T	C	3: 90,418,619 (GRCm39)	N65S	probably damaging	Het
Scn11a	A	T	9: 119,624,729 (GRCm39)	M531K	probably damaging	Het
Slc5a5	T	A	8: 71,342,865 (GRCm39)	M232L	probably benign	Het
Tet3	A	T	6: 83,350,305 (GRCm39)	N1054K	probably damaging	Het
Tg	A	G	15: 66,570,408 (GRCm39)	N1427D	probably benign	Het
Tns1	A	C	1: 73,956,831 (GRCm39)	V530G	probably damaging	Het
Trcg1	C	A	9: 57,153,156 (GRCm39)	Q600K	possibly damaging	Het
Tshz3	A	G	7: 36,468,131 (GRCm39)	E40G	probably damaging	Het
Usp34	T	C	11: 23,334,420 (GRCm39)	F1138S	possibly damaging	Het
Vmn2r26	C	T	6: 124,038,603 (GRCm39)	T726I	probably benign	Het
Vmn2r97	A	T	17: 19,148,440 (GRCm39)	R112*	probably null	Het
Vwa2	G	T	19: 56,897,426 (GRCm39)	R577L	probably benign	Het
Vwa3b	A	C	1: 37,196,511 (GRCm39)	Q46P	probably damaging	Het
Wdr25	T	A	12: 108,958,725 (GRCm39)		probably null	Het
Wrap53	A	G	11: 69,453,226 (GRCm39)	L405P	probably damaging	Het
Zfp629	C	A	7: 127,211,161 (GRCm39)	W216L	probably damaging	Het

Other mutations in Or55b4

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01099:Or55b4	APN	7	102,133,685 (GRCm39)	missense	probably damaging	1.00
IGL01380:Or55b4	APN	7	102,133,592 (GRCm39)	missense	probably damaging	1.00
IGL01594:Or55b4	APN	7	102,134,254 (GRCm39)	missense	probably benign
R0732:Or55b4	UTSW	7	102,133,650 (GRCm39)	missense	probably benign	0.15
R1387:Or55b4	UTSW	7	102,133,911 (GRCm39)	missense	probably benign	0.01
R2760:Or55b4	UTSW	7	102,133,583 (GRCm39)	missense	probably damaging	1.00
R5151:Or55b4	UTSW	7	102,134,192 (GRCm39)	missense	probably benign	0.00
R5916:Or55b4	UTSW	7	102,133,586 (GRCm39)	missense	probably damaging	1.00
R6084:Or55b4	UTSW	7	102,133,596 (GRCm39)	missense	probably damaging	1.00
R7069:Or55b4	UTSW	7	102,133,979 (GRCm39)	missense	possibly damaging	0.85
R7195:Or55b4	UTSW	7	102,133,574 (GRCm39)	missense	probably damaging	1.00
R7738:Or55b4	UTSW	7	102,133,818 (GRCm39)	missense	probably damaging	0.99
R8299:Or55b4	UTSW	7	102,133,409 (GRCm39)	missense	probably benign	0.01
R8433:Or55b4	UTSW	7	102,133,991 (GRCm39)	missense	probably benign	0.00
R9063:Or55b4	UTSW	7	102,133,931 (GRCm39)	missense	probably damaging	0.98
R9396:Or55b4	UTSW	7	102,134,180 (GRCm39)	missense	possibly damaging	0.95
R9698:Or55b4	UTSW	7	102,133,377 (GRCm39)	nonsense	probably null

Predicted Primers

PCR Primer
(F):5'- TGAGGCTCTCCAGTATGAGTGCAG -3'
(R):5'- AACCGAGTCCTGGATATGCTCCTG -3'

Sequencing Primer
(F):5'- agcatttggcaaactaagaaagg -3'
(R):5'- ATCTCATCAGGTGGAGCACG -3'

Posted On

2014-01-05