Incidental Mutation 'R1101:Plppr5'
ID |
98070 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Plppr5
|
Ensembl Gene |
ENSMUSG00000033342 |
Gene Name |
phospholipid phosphatase related 5 |
Synonyms |
Lppr5, 4833424O15Rik |
MMRRC Submission |
039174-MU
|
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.069)
|
Stock # |
R1101 (G1)
|
Quality Score |
225 |
Status
|
Not validated
|
Chromosome |
3 |
Chromosomal Location |
117368274-117483157 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
T to G
at 117456172 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Methionine to Arginine
at position 231
(M231R)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000102081
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000039564]
[ENSMUST00000106473]
|
AlphaFold |
Q8BJ52 |
Predicted Effect |
probably damaging
Transcript: ENSMUST00000039564
AA Change: M231R
PolyPhen 2
Score 0.993 (Sensitivity: 0.70; Specificity: 0.97)
|
SMART Domains |
Protein: ENSMUSP00000045121 Gene: ENSMUSG00000033342 AA Change: M231R
Domain | Start | End | E-Value | Type |
transmembrane domain
|
7 |
29 |
N/A |
INTRINSIC |
transmembrane domain
|
66 |
88 |
N/A |
INTRINSIC |
acidPPc
|
123 |
267 |
8.27e-20 |
SMART |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000106473
AA Change: M231R
PolyPhen 2
Score 0.993 (Sensitivity: 0.70; Specificity: 0.97)
|
SMART Domains |
Protein: ENSMUSP00000102081 Gene: ENSMUSG00000033342 AA Change: M231R
Domain | Start | End | E-Value | Type |
transmembrane domain
|
7 |
29 |
N/A |
INTRINSIC |
transmembrane domain
|
66 |
88 |
N/A |
INTRINSIC |
acidPPc
|
123 |
267 |
8.27e-20 |
SMART |
|
Coding Region Coverage |
- 1x: 98.9%
- 3x: 98.0%
- 10x: 95.5%
- 20x: 91.2%
|
Validation Efficiency |
|
MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene is a type 2 member of the phosphatidic acid phosphatase (PAP) family. All type 2 members of this protein family contain 6 transmembrane regions, and a consensus N-glycosylation site. PAPs convert phosphatidic acid to diacylglycerol, and function in de novo synthesis of glycerolipids as well as in receptor-activated signal transduction mediated by phospholipase D. Alternate transcriptional splice variants, encoding different isoforms, have been characterized. [provided by RefSeq, Jul 2008]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 42 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
1700034J05Rik |
T |
C |
6: 146,853,909 (GRCm39) |
I249M |
possibly damaging |
Het |
2610021A01Rik |
C |
A |
7: 41,276,783 (GRCm39) |
H829N |
probably damaging |
Het |
4930433I11Rik |
A |
T |
7: 40,642,480 (GRCm39) |
T141S |
probably benign |
Het |
Abi3bp |
G |
T |
16: 56,426,521 (GRCm39) |
R512L |
probably damaging |
Het |
Acot2 |
T |
G |
12: 84,039,624 (GRCm39) |
S378A |
probably benign |
Het |
Akap9 |
T |
C |
5: 4,096,205 (GRCm39) |
I2360T |
probably benign |
Het |
Bank1 |
T |
C |
3: 135,989,625 (GRCm39) |
D155G |
probably benign |
Het |
Bsn |
A |
G |
9: 107,993,610 (GRCm39) |
V714A |
probably damaging |
Het |
Cdh15 |
G |
A |
8: 123,587,585 (GRCm39) |
V170I |
possibly damaging |
Het |
Clcn2 |
G |
A |
16: 20,522,345 (GRCm39) |
T787I |
probably damaging |
Het |
Dapk1 |
A |
G |
13: 60,864,599 (GRCm39) |
H131R |
probably damaging |
Het |
Dct |
T |
G |
14: 118,274,034 (GRCm39) |
D291A |
probably damaging |
Het |
Dhx37 |
A |
G |
5: 125,492,216 (GRCm39) |
Y1128H |
probably damaging |
Het |
Dip2c |
A |
T |
13: 9,684,780 (GRCm39) |
I1174F |
probably damaging |
Het |
Eif3l |
A |
G |
15: 78,959,467 (GRCm39) |
Y3C |
probably damaging |
Het |
Enpp5 |
A |
G |
17: 44,392,258 (GRCm39) |
N229S |
possibly damaging |
Het |
Fam83b |
A |
T |
9: 76,452,952 (GRCm39) |
H38Q |
possibly damaging |
Het |
Fcamr |
T |
A |
1: 130,742,223 (GRCm39) |
|
probably null |
Het |
Hdac2 |
G |
A |
10: 36,867,805 (GRCm39) |
V184I |
probably damaging |
Het |
Igf2bp2 |
A |
T |
16: 21,981,700 (GRCm39) |
L5Q |
probably damaging |
Het |
Iqca1 |
C |
A |
1: 90,070,453 (GRCm39) |
G133V |
probably null |
Het |
Ireb2 |
T |
A |
9: 54,816,986 (GRCm39) |
H951Q |
probably benign |
Het |
Lman1 |
T |
A |
18: 66,120,969 (GRCm39) |
M418L |
probably benign |
Het |
Lrrfip2 |
C |
T |
9: 111,019,293 (GRCm39) |
R275W |
probably damaging |
Het |
Mast3 |
T |
A |
8: 71,239,307 (GRCm39) |
I424F |
probably damaging |
Het |
Mep1a |
T |
C |
17: 43,802,584 (GRCm39) |
D147G |
probably benign |
Het |
Mtr |
C |
A |
13: 12,204,411 (GRCm39) |
E1128D |
possibly damaging |
Het |
Ogfod1 |
C |
A |
8: 94,790,932 (GRCm39) |
S534R |
probably benign |
Het |
Or4c107 |
A |
T |
2: 88,789,328 (GRCm39) |
I173F |
possibly damaging |
Het |
Or4k42 |
T |
C |
2: 111,319,787 (GRCm39) |
T239A |
probably damaging |
Het |
Or5k1 |
A |
G |
16: 58,617,615 (GRCm39) |
V198A |
probably benign |
Het |
Oxtr |
C |
T |
6: 112,454,138 (GRCm39) |
R42Q |
probably benign |
Het |
Pcdh18 |
T |
A |
3: 49,707,828 (GRCm39) |
D882V |
probably damaging |
Het |
Pik3cg |
C |
T |
12: 32,245,645 (GRCm39) |
G868S |
probably null |
Het |
Polr2a |
T |
C |
11: 69,638,897 (GRCm39) |
T46A |
probably benign |
Het |
Ppp4r3a |
C |
A |
12: 101,017,830 (GRCm39) |
R440L |
probably damaging |
Het |
Serpinb9e |
A |
T |
13: 33,444,071 (GRCm39) |
T364S |
probably benign |
Het |
Sirt3 |
A |
G |
7: 140,449,541 (GRCm39) |
V135A |
possibly damaging |
Het |
Supt16 |
T |
C |
14: 52,408,896 (GRCm39) |
N826S |
probably null |
Het |
Tbr1 |
T |
C |
2: 61,635,083 (GRCm39) |
I11T |
probably benign |
Het |
Trim72 |
A |
G |
7: 127,609,419 (GRCm39) |
E407G |
possibly damaging |
Het |
Vps72 |
C |
A |
3: 95,026,487 (GRCm39) |
T144K |
probably damaging |
Het |
|
Other mutations in Plppr5 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00391:Plppr5
|
APN |
3 |
117,465,592 (GRCm39) |
missense |
possibly damaging |
0.46 |
IGL01081:Plppr5
|
APN |
3 |
117,480,298 (GRCm39) |
utr 3 prime |
probably benign |
|
IGL01315:Plppr5
|
APN |
3 |
117,456,175 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02802:Plppr5
|
UTSW |
3 |
117,456,228 (GRCm39) |
missense |
probably damaging |
1.00 |
R0044:Plppr5
|
UTSW |
3 |
117,465,538 (GRCm39) |
splice site |
probably null |
|
R0044:Plppr5
|
UTSW |
3 |
117,465,538 (GRCm39) |
splice site |
probably null |
|
R0332:Plppr5
|
UTSW |
3 |
117,465,581 (GRCm39) |
missense |
probably benign |
0.05 |
R0757:Plppr5
|
UTSW |
3 |
117,369,540 (GRCm39) |
missense |
probably benign |
0.16 |
R1354:Plppr5
|
UTSW |
3 |
117,369,496 (GRCm39) |
missense |
possibly damaging |
0.94 |
R1498:Plppr5
|
UTSW |
3 |
117,456,261 (GRCm39) |
missense |
probably damaging |
0.97 |
R1967:Plppr5
|
UTSW |
3 |
117,419,555 (GRCm39) |
critical splice donor site |
probably null |
|
R2090:Plppr5
|
UTSW |
3 |
117,369,520 (GRCm39) |
missense |
possibly damaging |
0.63 |
R4661:Plppr5
|
UTSW |
3 |
117,414,618 (GRCm39) |
missense |
probably damaging |
1.00 |
R5143:Plppr5
|
UTSW |
3 |
117,419,552 (GRCm39) |
missense |
probably benign |
|
R5441:Plppr5
|
UTSW |
3 |
117,456,120 (GRCm39) |
missense |
possibly damaging |
0.94 |
R5722:Plppr5
|
UTSW |
3 |
117,414,714 (GRCm39) |
missense |
probably benign |
0.00 |
R6560:Plppr5
|
UTSW |
3 |
117,465,639 (GRCm39) |
missense |
probably benign |
0.09 |
R7221:Plppr5
|
UTSW |
3 |
117,414,618 (GRCm39) |
missense |
probably damaging |
1.00 |
R8556:Plppr5
|
UTSW |
3 |
117,465,679 (GRCm39) |
missense |
probably benign |
|
R8925:Plppr5
|
UTSW |
3 |
117,369,532 (GRCm39) |
missense |
probably benign |
0.41 |
R8927:Plppr5
|
UTSW |
3 |
117,369,532 (GRCm39) |
missense |
probably benign |
0.41 |
R9015:Plppr5
|
UTSW |
3 |
117,456,103 (GRCm39) |
missense |
probably damaging |
1.00 |
Z1177:Plppr5
|
UTSW |
3 |
117,419,428 (GRCm39) |
missense |
probably damaging |
0.99 |
|
Predicted Primers |
PCR Primer
(F):5'- TGCACACATGGTTCTCAGTAAGAAATGG -3'
(R):5'- ACAAGCTGTCTCTTAAACCTGCACAT -3'
Sequencing Primer
(F):5'- cacacctttaatcccaacactc -3'
(R):5'- cacacacacacacacacac -3'
|
Posted On |
2014-01-05 |