Incidental Mutation 'R1174:Bivm'
ID 99765
Institutional Source Beutler Lab
Gene Symbol Bivm
Ensembl Gene ENSMUSG00000041684
Gene Name basic, immunoglobulin-like variable motif containing
Synonyms
MMRRC Submission 039247-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.092) question?
Stock # R1174 (G1)
Quality Score 225
Status Not validated
Chromosome 1
Chromosomal Location 44158117-44183930 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to G at 44165942 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Threonine to Alanine at position 131 (T131A)
Ref Sequence ENSEMBL: ENSMUSP00000110357 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000035991] [ENSMUST00000114709] [ENSMUST00000129068] [ENSMUST00000155917]
AlphaFold Q8CBX9
Predicted Effect probably benign
Transcript: ENSMUST00000035991
AA Change: T131A

PolyPhen 2 Score 0.035 (Sensitivity: 0.94; Specificity: 0.82)
SMART Domains Protein: ENSMUSP00000041964
Gene: ENSMUSG00000041684
AA Change: T131A

DomainStartEndE-ValueType
low complexity region 117 129 N/A INTRINSIC
low complexity region 162 174 N/A INTRINSIC
Blast:XPGN 456 501 3e-11 BLAST
Predicted Effect probably benign
Transcript: ENSMUST00000114709
AA Change: T131A

PolyPhen 2 Score 0.035 (Sensitivity: 0.94; Specificity: 0.82)
SMART Domains Protein: ENSMUSP00000110357
Gene: ENSMUSG00000041684
AA Change: T131A

DomainStartEndE-ValueType
low complexity region 117 129 N/A INTRINSIC
low complexity region 162 174 N/A INTRINSIC
Blast:XPGN 456 501 3e-11 BLAST
Predicted Effect probably benign
Transcript: ENSMUST00000129068
Predicted Effect noncoding transcript
Transcript: ENSMUST00000138521
Predicted Effect probably benign
Transcript: ENSMUST00000155917
Predicted Effect noncoding transcript
Transcript: ENSMUST00000186280
Meta Mutation Damage Score 0.0898 question?
Coding Region Coverage
  • 1x: 99.0%
  • 3x: 98.1%
  • 10x: 95.4%
  • 20x: 89.3%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 49 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
2610318N02Rik T A 16: 16,935,446 (GRCm39) H214L probably benign Het
Actn3 A G 19: 4,914,784 (GRCm39) L477P probably damaging Het
Adamts12 T C 15: 11,071,843 (GRCm39) V129A probably benign Het
Agxt2 T C 15: 10,373,837 (GRCm39) F81S probably damaging Het
Alpk1 T A 3: 127,474,459 (GRCm39) S515C probably damaging Het
Aoc1l3 C A 6: 48,967,173 (GRCm39) P707H probably damaging Het
Borcs5 T A 6: 134,687,096 (GRCm39) N150K probably damaging Het
Cdh20 G A 1: 109,988,862 (GRCm39) V255I probably benign Het
Cox4i1 C A 8: 121,400,789 (GRCm39) N151K probably benign Het
Cpeb4 T C 11: 31,870,472 (GRCm39) L432P probably damaging Het
Dnajb11 T A 16: 22,689,423 (GRCm39) D281E probably damaging Het
Eml6 A G 11: 29,699,824 (GRCm39) S1771P possibly damaging Het
Fes A T 7: 80,027,699 (GRCm39) I815N probably damaging Het
Ghrhr T A 6: 55,365,254 (GRCm39) L416* probably null Het
Glipr1l2 C A 10: 111,919,371 (GRCm39) L31I possibly damaging Het
Gm1818 A G 12: 48,602,982 (GRCm39) noncoding transcript Het
Gpr149 A G 3: 62,511,888 (GRCm39) L37P probably damaging Het
Hdac1-ps A T 17: 78,799,507 (GRCm39) Y166F probably benign Het
Hoxa9 A G 6: 52,202,693 (GRCm39) I131T probably damaging Het
Idh1 G T 1: 65,200,319 (GRCm39) N348K probably benign Het
Klf6 A G 13: 5,911,711 (GRCm39) D25G probably benign Het
Laptm4a T C 12: 8,986,716 (GRCm39) V258A probably damaging Het
Lypd6b C T 2: 49,833,609 (GRCm39) A83V possibly damaging Het
Map3k19 A G 1: 127,751,617 (GRCm39) V578A probably benign Het
Mfsd13a T A 19: 46,363,125 (GRCm39) I511N probably benign Het
Mrm3 T C 11: 76,140,850 (GRCm39) V286A probably damaging Het
Muc6 C T 7: 141,234,368 (GRCm39) G708S probably damaging Het
Neurl4 T C 11: 69,794,547 (GRCm39) probably null Het
Pclo T C 5: 14,727,660 (GRCm39) probably benign Het
Pcnt A T 10: 76,228,878 (GRCm39) probably null Het
Pik3r4 G T 9: 105,540,373 (GRCm39) G754C probably damaging Het
Qtrt1 A G 9: 21,323,782 (GRCm39) T136A probably benign Het
Rgs12 T A 5: 35,123,809 (GRCm39) C531S probably benign Het
Rin1 C A 19: 5,105,231 (GRCm39) Q764K probably benign Het
Robo4 C T 9: 37,324,348 (GRCm39) R959W probably damaging Het
Rxfp2 T C 5: 149,975,021 (GRCm39) V210A probably benign Het
Serpinb9d C T 13: 33,384,608 (GRCm39) P195L probably benign Het
Sos1 A C 17: 80,753,037 (GRCm39) Y323* probably null Het
Spmip4 T A 6: 50,566,121 (GRCm39) K118M probably damaging Het
Ssxb8 T G X: 8,556,062 (GRCm39) H88P probably damaging Het
Tas2r140 T C 6: 133,031,834 (GRCm39) E308G probably benign Het
Tdo2 A T 3: 81,881,683 (GRCm39) S40R probably damaging Het
Tle4 C T 19: 14,445,626 (GRCm39) V207I probably benign Het
Txlnb A G 10: 17,718,504 (GRCm39) N445S probably benign Het
Ubap2l A T 3: 89,930,807 (GRCm39) S413T probably benign Het
Vangl2 G T 1: 171,832,353 (GRCm39) T501N probably damaging Het
Vmn2r12 A T 5: 109,240,720 (GRCm39) I131N probably benign Het
Vwa1 C T 4: 155,857,723 (GRCm39) G25D probably damaging Het
Zfp185 A T X: 72,042,929 (GRCm39) E138D possibly damaging Het
Other mutations in Bivm
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01090:Bivm APN 1 44,168,451 (GRCm39) missense probably damaging 1.00
IGL01384:Bivm APN 1 44,165,907 (GRCm39) missense possibly damaging 0.86
IGL01552:Bivm APN 1 44,165,933 (GRCm39) missense probably benign 0.40
IGL01736:Bivm APN 1 44,180,973 (GRCm39) missense probably damaging 1.00
IGL02332:Bivm APN 1 44,167,880 (GRCm39) unclassified probably benign
IGL02704:Bivm APN 1 44,165,606 (GRCm39) missense probably benign
IGL02859:Bivm APN 1 44,176,159 (GRCm39) nonsense probably null
IGL02939:Bivm APN 1 44,182,120 (GRCm39) missense probably benign 0.03
IGL03265:Bivm APN 1 44,181,005 (GRCm39) missense probably damaging 1.00
R0456:Bivm UTSW 1 44,165,969 (GRCm39) missense probably damaging 1.00
R1172:Bivm UTSW 1 44,165,942 (GRCm39) missense probably benign 0.04
R1173:Bivm UTSW 1 44,165,942 (GRCm39) missense probably benign 0.04
R1177:Bivm UTSW 1 44,182,123 (GRCm39) missense probably benign 0.28
R1350:Bivm UTSW 1 44,165,863 (GRCm39) missense possibly damaging 0.88
R1611:Bivm UTSW 1 44,165,907 (GRCm39) missense possibly damaging 0.92
R2518:Bivm UTSW 1 44,168,775 (GRCm39) missense probably damaging 0.96
R3735:Bivm UTSW 1 44,165,594 (GRCm39) missense probably benign 0.07
R4290:Bivm UTSW 1 44,177,793 (GRCm39) missense probably damaging 1.00
R4292:Bivm UTSW 1 44,177,793 (GRCm39) missense probably damaging 1.00
R4293:Bivm UTSW 1 44,177,793 (GRCm39) missense probably damaging 1.00
R4294:Bivm UTSW 1 44,177,793 (GRCm39) missense probably damaging 1.00
R4849:Bivm UTSW 1 44,182,033 (GRCm39) missense possibly damaging 0.70
R5204:Bivm UTSW 1 44,177,738 (GRCm39) missense probably damaging 0.96
R5912:Bivm UTSW 1 44,165,573 (GRCm39) nonsense probably null
R6045:Bivm UTSW 1 44,158,233 (GRCm39) start gained probably benign
R6216:Bivm UTSW 1 44,166,028 (GRCm39) critical splice donor site probably null
R6836:Bivm UTSW 1 44,182,296 (GRCm39) missense possibly damaging 0.88
R7120:Bivm UTSW 1 44,165,606 (GRCm39) missense probably benign
R7817:Bivm UTSW 1 44,165,561 (GRCm39) missense probably benign 0.01
R8893:Bivm UTSW 1 44,158,439 (GRCm39) intron probably benign
R9110:Bivm UTSW 1 44,168,526 (GRCm39) critical splice donor site probably null
R9128:Bivm UTSW 1 44,167,949 (GRCm39) missense probably null 1.00
R9511:Bivm UTSW 1 44,182,250 (GRCm39) missense possibly damaging 0.88
Predicted Primers
Posted On 2014-01-15