Mutagenetix > Incidental Mutations

Incidental Mutation 'R1174:Gm10093'

99857

Institutional Source

Beutler Lab

Gene Symbol

Gm10093

Ensembl Gene

ENSMUSG00000061062

Gene Name

predicted pseudogene 10093

Synonyms

EG15181

MMRRC Submission

039247-MU

Accession Numbers

Is this an essential gene?

Probably essential (E-score: 0.754) question?

Stock #

R1174 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

78491565-78493541 bp(+) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

A to T at 78492078 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Tyrosine to Phenylalanine at position 166 (Y166F)

Ref Sequence

ENSEMBL: ENSMUSP00000078339 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000079363]

AlphaFold

no structure available at present

Predicted Effect

probably benign
Transcript: ENSMUST00000079363
AA Change: Y166F

PolyPhen 2 Score 0.010 (Sensitivity: 0.96; Specificity: 0.77)

SMART Domains

Protein: ENSMUSP00000078339
Gene: ENSMUSG00000061062
AA Change: Y166F

Domain	Start	End	E-Value	Type
Pfam:Hist_deacetyl	18	320	3.2e-84	PFAM
low complexity region	390	402	N/A	INTRINSIC
low complexity region	417	430	N/A	INTRINSIC
low complexity region	443	471	N/A	INTRINSIC

Coding Region Coverage

1x: 99.0%
3x: 98.1%
10x: 95.4%
20x: 89.3%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 49 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
2610318N02Rik	T	A	16: 17,117,582	H214L	probably benign	Het
4921507P07Rik	T	A	6: 50,589,141	K118M	probably damaging	Het
Actn3	A	G	19: 4,864,756	L477P	probably damaging	Het
Adamts12	T	C	15: 11,071,757	V129A	probably benign	Het
Agxt2	T	C	15: 10,373,751	F81S	probably damaging	Het
Alpk1	T	A	3: 127,680,810	S515C	probably damaging	Het
Bivm	A	G	1: 44,126,782	T131A	probably benign	Het
Borcs5	T	A	6: 134,710,133	N150K	probably damaging	Het
Cdh7	G	A	1: 110,061,132	V255I	probably benign	Het
Cox4i1	C	A	8: 120,674,050	N151K	probably benign	Het
Cpeb4	T	C	11: 31,920,472	L432P	probably damaging	Het
Dnajb11	T	A	16: 22,870,673	D281E	probably damaging	Het
Eml6	A	G	11: 29,749,824	S1771P	possibly damaging	Het
Fes	A	T	7: 80,377,951	I815N	probably damaging	Het
Ghrhr	T	A	6: 55,388,269	L416*	probably null	Het
Glipr1l2	C	A	10: 112,083,466	L31I	possibly damaging	Het
Gm1818	A	G	12: 48,556,199		noncoding transcript	Het
Gpr149	A	G	3: 62,604,467	L37P	probably damaging	Het
Hoxa9	A	G	6: 52,225,713	I131T	probably damaging	Het
Idh1	G	T	1: 65,161,160	N348K	probably benign	Het
Klf6	A	G	13: 5,861,712	D25G	probably benign	Het
Laptm4a	T	C	12: 8,936,716	V258A	probably damaging	Het
Lypd6b	C	T	2: 49,943,597	A83V	possibly damaging	Het
Map3k19	A	G	1: 127,823,880	V578A	probably benign	Het
Mfsd13a	T	A	19: 46,374,686	I511N	probably benign	Het
Mrm3	T	C	11: 76,250,024	V286A	probably damaging	Het
Muc6	C	T	7: 141,648,101	G708S	probably damaging	Het
Neurl4	T	C	11: 69,903,721		probably null	Het
Pclo	T	C	5: 14,677,646		probably benign	Het
Pcnt	A	T	10: 76,393,044		probably null	Het
Pik3r4	G	T	9: 105,663,174	G754C	probably damaging	Het
Qtrt1	A	G	9: 21,412,486	T136A	probably benign	Het
Rgs12	T	A	5: 34,966,465	C531S	probably benign	Het
Rin1	C	A	19: 5,055,203	Q764K	probably benign	Het
Robo4	C	T	9: 37,413,052	R959W	probably damaging	Het
Rxfp2	T	C	5: 150,051,556	V210A	probably benign	Het
Serpinb9d	C	T	13: 33,200,625	P195L	probably benign	Het
Sos1	A	C	17: 80,445,608	Y323*	probably null	Het
Ssxb8	T	G	X: 8,689,823	H88P	probably damaging	Het
Svs1	C	A	6: 48,990,239	P707H	probably damaging	Het
Tas2r140	T	C	6: 133,054,871	E308G	probably benign	Het
Tdo2	A	T	3: 81,974,376	S40R	probably damaging	Het
Tle4	C	T	19: 14,468,262	V207I	probably benign	Het
Txlnb	A	G	10: 17,842,756	N445S	probably benign	Het
Ubap2l	A	T	3: 90,023,500	S413T	probably benign	Het
Vangl2	G	T	1: 172,004,786	T501N	probably damaging	Het
Vmn2r12	A	T	5: 109,092,854	I131N	probably benign	Het
Vwa1	C	T	4: 155,773,266	G25D	probably damaging	Het
Zfp185	A	T	X: 72,999,323	E138D	possibly damaging	Het

Other mutations in Gm10093

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01936:Gm10093	APN	17	78492129	missense	probably damaging	1.00
IGL01983:Gm10093	APN	17	78492853	missense	probably benign
IGL02543:Gm10093	APN	17	78491874	missense	probably damaging	0.97
buttress	UTSW	17	78492914	missense	possibly damaging	0.91
Chartre	UTSW	17	78492540	missense	probably damaging	0.99
R1605:Gm10093	UTSW	17	78492108	missense	probably damaging	0.98
R2416:Gm10093	UTSW	17	78492516	missense	probably damaging	1.00
R2919:Gm10093	UTSW	17	78492846	missense	probably damaging	0.98
R2920:Gm10093	UTSW	17	78492846	missense	probably damaging	0.98
R3846:Gm10093	UTSW	17	78492972	missense	possibly damaging	0.91
R4544:Gm10093	UTSW	17	78492959	missense	probably benign	0.02
R4546:Gm10093	UTSW	17	78492959	missense	probably benign	0.02
R5223:Gm10093	UTSW	17	78492438	missense	probably benign	0.02
R5297:Gm10093	UTSW	17	78492758	missense	probably benign
R6164:Gm10093	UTSW	17	78492287	missense	probably damaging	0.99
R6568:Gm10093	UTSW	17	78492588	missense	probably damaging	1.00
R6726:Gm10093	UTSW	17	78492858	missense	probably damaging	0.99
R6901:Gm10093	UTSW	17	78492660	missense	probably benign	0.07
R6923:Gm10093	UTSW	17	78492914	missense	possibly damaging	0.91
R7838:Gm10093	UTSW	17	78492018	missense	probably damaging	1.00
R8002:Gm10093	UTSW	17	78492287	missense	probably damaging	0.99
R8728:Gm10093	UTSW	17	78492903	missense	probably benign	0.01
R8821:Gm10093	UTSW	17	78492540	missense	probably damaging	0.99
R8920:Gm10093	UTSW	17	78491742	missense	probably benign	0.37
X0060:Gm10093	UTSW	17	78492128	missense	probably damaging	0.99

Predicted Primers

Posted On

2014-01-15