Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL00850:Scd3'

13923

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Scd3

Ensembl Gene

ENSMUSG00000025202

Gene Name

stearoyl-coenzyme A desaturase 3

Synonyms

4930513N16Rik

Accession Numbers

Essential gene?

Probably essential (E-score: 0.953) question?

Stock #

IGL00850

Quality Score

Status

Chromosome

Chromosomal Location

44191727-44232455 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 44224247 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Histidine to Arginine at position 160 (H160R)

Ref Sequence

ENSEMBL: ENSMUSP00000026220 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000026220]

AlphaFold

Q99PL7

Predicted Effect

probably damaging
Transcript: ENSMUST00000026220
AA Change: H160R

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000026220
Gene: ENSMUSG00000025202
AA Change: H160R

Domain	Start	End	E-Value	Type
low complexity region	11	27	N/A	INTRINSIC
transmembrane domain	71	93	N/A	INTRINSIC
Pfam:FA_desaturase	97	316	1.9e-17	PFAM

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 29 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Cand1	C	A	10: 119,047,040 (GRCm39)	V817L	probably benign	Het
Cdc16	T	G	8: 13,817,575 (GRCm39)	Y295*	probably null	Het
Cdk12	T	A	11: 98,113,491 (GRCm39)	N758K	unknown	Het
Cep295	A	G	9: 15,234,148 (GRCm39)	L2216S	probably benign	Het
Chpf2	A	G	5: 24,797,259 (GRCm39)	E735G	probably damaging	Het
Chrdl2	A	G	7: 99,683,848 (GRCm39)	T432A	probably damaging	Het
Cyp4a12b	T	A	4: 115,295,246 (GRCm39)		probably null	Het
D130043K22Rik	T	G	13: 25,051,157 (GRCm39)	D464E	probably damaging	Het
Dst	G	T	1: 34,345,705 (GRCm39)	A7622S	probably damaging	Het
Fdx1	A	T	9: 51,859,949 (GRCm39)	I127N	probably damaging	Het
Fem1a	A	G	17: 56,565,355 (GRCm39)	I483V	possibly damaging	Het
Gcc2	C	A	10: 58,094,070 (GRCm39)	D51E	probably benign	Het
Glrb	A	G	3: 80,769,088 (GRCm39)	S178P	probably damaging	Het
Inpp4b	A	G	8: 82,583,379 (GRCm39)	Q161R	probably damaging	Het
Lrrc45	T	C	11: 120,611,436 (GRCm39)		probably benign	Het
Myh3	T	C	11: 66,981,681 (GRCm39)	Y757H	probably damaging	Het
Myo1h	A	C	5: 114,453,132 (GRCm39)		probably benign	Het
Nudt13	T	A	14: 20,356,418 (GRCm39)	S114R	probably damaging	Het
Omg	T	C	11: 79,393,540 (GRCm39)	N106S	possibly damaging	Het
Pbrm1	T	C	14: 30,809,576 (GRCm39)	V1163A	probably damaging	Het
Pi4k2b	T	A	5: 52,918,292 (GRCm39)	Y350*	probably null	Het
Prr29	C	A	11: 106,266,033 (GRCm39)	T32K	possibly damaging	Het
Psd4	C	T	2: 24,284,298 (GRCm39)	A54V	probably benign	Het
Shroom3	T	C	5: 93,098,924 (GRCm39)	L1387P	probably damaging	Het
Stk35	A	G	2: 129,643,912 (GRCm39)	T299A	probably damaging	Het
Thsd7b	G	A	1: 130,092,814 (GRCm39)	S1238N	probably benign	Het
Utp11	T	C	4: 124,576,250 (GRCm39)	K131R	probably benign	Het
Vps50	C	T	6: 3,532,177 (GRCm39)	Q227*	probably null	Het
Zan	T	C	5: 137,462,375 (GRCm39)	T935A	unknown	Het

Other mutations in Scd3

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00507:Scd3	APN	19	44,224,273 (GRCm39)	missense	probably damaging	1.00
IGL02207:Scd3	APN	19	44,204,028 (GRCm39)	missense	possibly damaging	0.60
R0054:Scd3	UTSW	19	44,204,076 (GRCm39)	missense	probably damaging	1.00
R1820:Scd3	UTSW	19	44,230,245 (GRCm39)	missense	probably benign	0.00
R1847:Scd3	UTSW	19	44,224,281 (GRCm39)	missense	probably damaging	1.00
R1944:Scd3	UTSW	19	44,224,219 (GRCm39)	missense	probably benign	0.16
R1945:Scd3	UTSW	19	44,224,219 (GRCm39)	missense	probably benign	0.16
R3834:Scd3	UTSW	19	44,230,156 (GRCm39)	missense	probably damaging	1.00
R4551:Scd3	UTSW	19	44,203,878 (GRCm39)	missense	probably benign	0.00
R5797:Scd3	UTSW	19	44,203,950 (GRCm39)	missense	probably benign	0.10
R7921:Scd3	UTSW	19	44,224,331 (GRCm39)	missense	possibly damaging	0.83
R7978:Scd3	UTSW	19	44,222,688 (GRCm39)	nonsense	probably null
R8247:Scd3	UTSW	19	44,227,003 (GRCm39)	missense	possibly damaging	0.53
R8886:Scd3	UTSW	19	44,230,276 (GRCm39)	missense	probably damaging	0.99
R9057:Scd3	UTSW	19	44,224,340 (GRCm39)	missense	probably damaging	0.99
R9527:Scd3	UTSW	19	44,226,816 (GRCm39)	missense	probably benign	0.06
X0026:Scd3	UTSW	19	44,222,757 (GRCm39)	missense	probably benign	0.01
Z1176:Scd3	UTSW	19	44,224,315 (GRCm39)	missense	probably damaging	1.00

Posted On

2012-12-06