Incidental Mutation 'IGL01754:Usp17ld'
ID |
153419 |
Institutional Source |
Australian Phenomics Network
(link to record)
|
Gene Symbol |
Usp17ld
|
Ensembl Gene |
ENSMUSG00000057321 |
Gene Name |
ubiquitin specific peptidase 17-like D |
Synonyms |
Dub2a |
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.085)
|
Stock # |
IGL01754
|
Quality Score |
|
Status
|
|
Chromosome |
7 |
Chromosomal Location |
102899293-102901712 bp(-) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
A to C
at 102899870 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Valine to Glycine
at position 354
(V354G)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000073107
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000073394]
|
AlphaFold |
G5E8G2 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000073394
AA Change: V354G
PolyPhen 2
Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
|
SMART Domains |
Protein: ENSMUSP00000073107 Gene: ENSMUSG00000057321 AA Change: V354G
Domain | Start | End | E-Value | Type |
Pfam:UCH
|
50 |
345 |
2.4e-54 |
PFAM |
Pfam:UCH_1
|
51 |
327 |
2e-25 |
PFAM |
low complexity region
|
374 |
385 |
N/A |
INTRINSIC |
low complexity region
|
529 |
542 |
N/A |
INTRINSIC |
|
Coding Region Coverage |
|
Validation Efficiency |
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 23 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Adat1 |
A |
G |
8: 112,708,942 (GRCm39) |
C294R |
probably damaging |
Het |
Afap1l1 |
A |
G |
18: 61,870,565 (GRCm39) |
|
probably null |
Het |
Art2a |
C |
T |
7: 101,204,059 (GRCm39) |
V160M |
probably damaging |
Het |
Atp8b3 |
T |
C |
10: 80,366,795 (GRCm39) |
|
probably null |
Het |
Cwc22 |
A |
G |
2: 77,754,883 (GRCm39) |
I231T |
probably damaging |
Het |
Efr3a |
C |
A |
15: 65,726,569 (GRCm39) |
A554E |
probably damaging |
Het |
Fads2b |
T |
C |
2: 85,348,899 (GRCm39) |
Q71R |
probably damaging |
Het |
Fam3b |
T |
C |
16: 97,277,607 (GRCm39) |
T76A |
probably benign |
Het |
Fhdc1 |
G |
A |
3: 84,352,042 (GRCm39) |
A1061V |
possibly damaging |
Het |
Gm4454 |
T |
C |
7: 38,268,386 (GRCm39) |
T253A |
probably damaging |
Het |
Gpsm2 |
C |
T |
3: 108,610,361 (GRCm39) |
R33H |
probably damaging |
Het |
Igkv5-39 |
A |
G |
6: 69,877,661 (GRCm39) |
S12P |
probably damaging |
Het |
Itga10 |
G |
A |
3: 96,564,091 (GRCm39) |
|
probably benign |
Het |
Kng1 |
A |
T |
16: 22,898,364 (GRCm39) |
D407V |
probably benign |
Het |
Lrrd1 |
A |
G |
5: 3,901,432 (GRCm39) |
D579G |
probably damaging |
Het |
Plcg1 |
C |
A |
2: 160,603,353 (GRCm39) |
Q1175K |
probably damaging |
Het |
Scml4 |
T |
A |
10: 42,833,746 (GRCm39) |
|
probably benign |
Het |
Slc26a4 |
C |
T |
12: 31,578,853 (GRCm39) |
|
probably benign |
Het |
Slc5a4b |
A |
G |
10: 75,906,449 (GRCm39) |
L390P |
probably damaging |
Het |
Tectb |
A |
G |
19: 55,172,445 (GRCm39) |
Q164R |
probably damaging |
Het |
Trim52 |
C |
T |
14: 106,344,623 (GRCm39) |
Q94* |
probably null |
Het |
Usp43 |
T |
C |
11: 67,747,007 (GRCm39) |
H895R |
probably benign |
Het |
Vmn2r24 |
T |
C |
6: 123,781,120 (GRCm39) |
L442P |
probably damaging |
Het |
|
Other mutations in Usp17ld |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00705:Usp17ld
|
APN |
7 |
102,899,645 (GRCm39) |
missense |
probably benign |
0.00 |
IGL02422:Usp17ld
|
APN |
7 |
102,899,967 (GRCm39) |
missense |
probably damaging |
1.00 |
R1701:Usp17ld
|
UTSW |
7 |
102,899,783 (GRCm39) |
missense |
probably benign |
0.00 |
R3113:Usp17ld
|
UTSW |
7 |
102,899,870 (GRCm39) |
missense |
probably benign |
0.01 |
R5057:Usp17ld
|
UTSW |
7 |
102,899,655 (GRCm39) |
missense |
probably benign |
0.07 |
R5161:Usp17ld
|
UTSW |
7 |
102,899,579 (GRCm39) |
nonsense |
probably null |
|
R5259:Usp17ld
|
UTSW |
7 |
102,899,781 (GRCm39) |
nonsense |
probably null |
|
R5656:Usp17ld
|
UTSW |
7 |
102,900,047 (GRCm39) |
missense |
probably damaging |
1.00 |
R6528:Usp17ld
|
UTSW |
7 |
102,899,962 (GRCm39) |
missense |
probably damaging |
1.00 |
R7573:Usp17ld
|
UTSW |
7 |
102,900,094 (GRCm39) |
nonsense |
probably null |
|
R7688:Usp17ld
|
UTSW |
7 |
102,899,982 (GRCm39) |
missense |
probably damaging |
1.00 |
R7711:Usp17ld
|
UTSW |
7 |
102,899,489 (GRCm39) |
missense |
probably damaging |
0.99 |
R7800:Usp17ld
|
UTSW |
7 |
102,900,041 (GRCm39) |
missense |
probably damaging |
1.00 |
R8099:Usp17ld
|
UTSW |
7 |
102,899,495 (GRCm39) |
missense |
probably damaging |
1.00 |
R8303:Usp17ld
|
UTSW |
7 |
102,900,023 (GRCm39) |
missense |
probably damaging |
1.00 |
R9388:Usp17ld
|
UTSW |
7 |
102,900,145 (GRCm39) |
missense |
probably benign |
0.01 |
R9486:Usp17ld
|
UTSW |
7 |
102,899,381 (GRCm39) |
missense |
probably benign |
0.29 |
R9620:Usp17ld
|
UTSW |
7 |
102,900,179 (GRCm39) |
missense |
possibly damaging |
0.78 |
RF009:Usp17ld
|
UTSW |
7 |
102,899,495 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Posted On |
2014-02-04 |