Incidental Mutation 'IGL02118:Pramel20'
ID |
280460 |
Institutional Source |
Australian Phenomics Network
(link to record)
|
Gene Symbol |
Pramel20
|
Ensembl Gene |
ENSMUSG00000070618 |
Gene Name |
PRAME like 20 |
Synonyms |
BC080695 |
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.073)
|
Stock # |
IGL02118
|
Quality Score |
|
Status
|
|
Chromosome |
4 |
Chromosomal Location |
143294045-143300368 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
A to T
at 143297726 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Threonine to Serine
at position 49
(T49S)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000101400
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000105765]
[ENSMUST00000105774]
|
AlphaFold |
Q66JY9 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000105765
AA Change: T49S
PolyPhen 2
Score 0.424 (Sensitivity: 0.89; Specificity: 0.90)
|
SMART Domains |
Protein: ENSMUSP00000101391 Gene: ENSMUSG00000070618 AA Change: T49S
Domain | Start | End | E-Value | Type |
SCOP:d1a4ya_
|
210 |
414 |
5e-12 |
SMART |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000105774
AA Change: T49S
PolyPhen 2
Score 0.424 (Sensitivity: 0.89; Specificity: 0.90)
|
SMART Domains |
Protein: ENSMUSP00000101400 Gene: ENSMUSG00000070618 AA Change: T49S
Domain | Start | End | E-Value | Type |
SCOP:d1a4ya_
|
210 |
414 |
5e-12 |
SMART |
|
Coding Region Coverage |
|
Validation Efficiency |
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 38 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Acox3 |
T |
C |
5: 35,758,865 (GRCm39) |
Y359H |
possibly damaging |
Het |
Actn2 |
A |
G |
13: 12,291,433 (GRCm39) |
|
probably benign |
Het |
Actr8 |
T |
C |
14: 29,704,728 (GRCm39) |
|
probably null |
Het |
Aldh16a1 |
G |
A |
7: 44,795,459 (GRCm39) |
P400L |
probably damaging |
Het |
Aldob |
T |
A |
4: 49,538,790 (GRCm39) |
K243* |
probably null |
Het |
Arfgap1 |
T |
C |
2: 180,622,237 (GRCm39) |
F274S |
possibly damaging |
Het |
Brd8 |
C |
T |
18: 34,735,780 (GRCm39) |
S899N |
probably damaging |
Het |
Cask |
T |
C |
X: 13,425,634 (GRCm39) |
I471V |
probably damaging |
Het |
Cdc42ep4 |
C |
T |
11: 113,619,942 (GRCm39) |
G150S |
probably benign |
Het |
Cpne1 |
T |
G |
2: 155,919,563 (GRCm39) |
D278A |
possibly damaging |
Het |
Gcn1 |
A |
G |
5: 115,748,938 (GRCm39) |
E1856G |
probably damaging |
Het |
Gm8362 |
A |
T |
14: 18,149,595 (GRCm39) |
V159E |
probably damaging |
Het |
Golga5 |
A |
G |
12: 102,462,011 (GRCm39) |
I700V |
possibly damaging |
Het |
Ifi206 |
T |
C |
1: 173,309,334 (GRCm39) |
T221A |
probably benign |
Het |
Ighv2-6-8 |
T |
C |
12: 113,760,037 (GRCm39) |
K24R |
possibly damaging |
Het |
Morc1 |
T |
C |
16: 48,407,467 (GRCm39) |
L661P |
probably benign |
Het |
Per2 |
G |
A |
1: 91,352,031 (GRCm39) |
T825I |
probably damaging |
Het |
Plscr1l1 |
A |
T |
9: 92,233,011 (GRCm39) |
K45* |
probably null |
Het |
Prkar2b |
A |
G |
12: 32,025,963 (GRCm39) |
V19A |
probably damaging |
Het |
Psmb8 |
T |
A |
17: 34,420,198 (GRCm39) |
D263E |
probably damaging |
Het |
Pum2 |
T |
C |
12: 8,779,117 (GRCm39) |
I563T |
probably benign |
Het |
Retreg1 |
T |
G |
15: 25,966,709 (GRCm39) |
|
probably null |
Het |
Rfx7 |
A |
G |
9: 72,524,486 (GRCm39) |
T559A |
probably benign |
Het |
Rnf31 |
T |
G |
14: 55,836,569 (GRCm39) |
I801S |
probably damaging |
Het |
Rom1 |
G |
T |
19: 8,906,386 (GRCm39) |
T51N |
possibly damaging |
Het |
Sema6b |
G |
T |
17: 56,439,821 (GRCm39) |
P7T |
probably benign |
Het |
Stpg1 |
A |
G |
4: 135,235,375 (GRCm39) |
|
probably benign |
Het |
Sugct |
A |
T |
13: 17,627,105 (GRCm39) |
Y249* |
probably null |
Het |
Tbc1d21 |
C |
T |
9: 58,267,746 (GRCm39) |
V317M |
probably benign |
Het |
Tcea2 |
A |
G |
2: 181,327,628 (GRCm39) |
I125V |
probably benign |
Het |
Ttc39b |
T |
A |
4: 83,216,186 (GRCm39) |
D19V |
probably damaging |
Het |
Tti2 |
T |
A |
8: 31,645,537 (GRCm39) |
|
probably null |
Het |
Usp32 |
A |
T |
11: 84,923,003 (GRCm39) |
Y142* |
probably null |
Het |
Vill |
A |
G |
9: 118,889,466 (GRCm39) |
Y134C |
probably benign |
Het |
Vmn2r9 |
G |
A |
5: 108,991,502 (GRCm39) |
L620F |
probably damaging |
Het |
Zfp398 |
A |
G |
6: 47,835,879 (GRCm39) |
D14G |
probably damaging |
Het |
Zfp598 |
T |
C |
17: 24,896,591 (GRCm39) |
Y223H |
probably damaging |
Het |
Znhit6 |
G |
T |
3: 145,283,859 (GRCm39) |
C43F |
probably damaging |
Het |
|
Other mutations in Pramel20 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL02533:Pramel20
|
APN |
4 |
143,297,572 (GRCm39) |
utr 5 prime |
probably benign |
|
R0352:Pramel20
|
UTSW |
4 |
143,297,878 (GRCm39) |
splice site |
probably benign |
|
R1600:Pramel20
|
UTSW |
4 |
143,298,537 (GRCm39) |
missense |
possibly damaging |
0.78 |
R3121:Pramel20
|
UTSW |
4 |
143,297,583 (GRCm39) |
start codon destroyed |
probably null |
1.00 |
R4005:Pramel20
|
UTSW |
4 |
143,298,839 (GRCm39) |
missense |
probably benign |
0.00 |
R4477:Pramel20
|
UTSW |
4 |
143,297,732 (GRCm39) |
missense |
probably benign |
0.21 |
R4639:Pramel20
|
UTSW |
4 |
143,298,467 (GRCm39) |
missense |
probably benign |
0.22 |
R4791:Pramel20
|
UTSW |
4 |
143,297,559 (GRCm39) |
start gained |
probably benign |
|
R5118:Pramel20
|
UTSW |
4 |
143,297,697 (GRCm39) |
missense |
probably damaging |
1.00 |
R5353:Pramel20
|
UTSW |
4 |
143,297,807 (GRCm39) |
missense |
probably benign |
0.00 |
R5861:Pramel20
|
UTSW |
4 |
143,297,810 (GRCm39) |
missense |
probably benign |
|
R6163:Pramel20
|
UTSW |
4 |
143,298,605 (GRCm39) |
missense |
probably damaging |
1.00 |
R6286:Pramel20
|
UTSW |
4 |
143,297,796 (GRCm39) |
missense |
probably benign |
|
R6958:Pramel20
|
UTSW |
4 |
143,297,829 (GRCm39) |
missense |
probably damaging |
1.00 |
R7391:Pramel20
|
UTSW |
4 |
143,298,876 (GRCm39) |
missense |
probably damaging |
1.00 |
R7625:Pramel20
|
UTSW |
4 |
143,298,821 (GRCm39) |
missense |
probably benign |
0.00 |
R8189:Pramel20
|
UTSW |
4 |
143,298,530 (GRCm39) |
missense |
probably benign |
|
R8190:Pramel20
|
UTSW |
4 |
143,298,530 (GRCm39) |
missense |
probably benign |
|
R8192:Pramel20
|
UTSW |
4 |
143,298,530 (GRCm39) |
missense |
probably benign |
|
R8219:Pramel20
|
UTSW |
4 |
143,298,530 (GRCm39) |
missense |
probably benign |
|
R8221:Pramel20
|
UTSW |
4 |
143,298,530 (GRCm39) |
missense |
probably benign |
|
R8223:Pramel20
|
UTSW |
4 |
143,298,530 (GRCm39) |
missense |
probably benign |
|
R8226:Pramel20
|
UTSW |
4 |
143,298,530 (GRCm39) |
missense |
probably benign |
|
R9005:Pramel20
|
UTSW |
4 |
143,298,425 (GRCm39) |
missense |
probably benign |
0.11 |
R9150:Pramel20
|
UTSW |
4 |
143,298,531 (GRCm39) |
missense |
probably benign |
|
R9295:Pramel20
|
UTSW |
4 |
143,298,704 (GRCm39) |
missense |
possibly damaging |
0.51 |
R9307:Pramel20
|
UTSW |
4 |
143,299,314 (GRCm39) |
missense |
probably damaging |
1.00 |
R9691:Pramel20
|
UTSW |
4 |
143,299,328 (GRCm39) |
missense |
probably benign |
0.09 |
Z1176:Pramel20
|
UTSW |
4 |
143,298,822 (GRCm39) |
missense |
probably benign |
0.00 |
|
Posted On |
2015-04-16 |