Incidental Mutation 'IGL02251:Armc6'
ID 286395
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Armc6
Ensembl Gene ENSMUSG00000002343
Gene Name armadillo repeat containing 6
Synonyms 2410153K17Rik
Accession Numbers
Essential gene? Probably non essential (E-score: 0.147) question?
Stock # IGL02251
Quality Score
Status
Chromosome 8
Chromosomal Location 70672822-70687099 bp(-) (GRCm39)
Type of Mutation nonsense
DNA Base Change (assembly) A to T at 70677870 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Leucine to Stop codon at position 153 (L153*)
Ref Sequence ENSEMBL: ENSMUSP00000019679 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000019679] [ENSMUST00000130319]
AlphaFold Q8BNU0
Predicted Effect probably null
Transcript: ENSMUST00000019679
AA Change: L153*
SMART Domains Protein: ENSMUSP00000019679
Gene: ENSMUSG00000002343
AA Change: L153*

DomainStartEndE-ValueType
Blast:UTG 14 77 2e-26 BLAST
ARM 140 182 8.74e1 SMART
ARM 184 226 3.64e-7 SMART
ARM 237 280 6.01e0 SMART
ARM 281 323 1.13e-3 SMART
ARM 324 366 8.3e-2 SMART
ARM 368 410 1.06e1 SMART
Blast:ARM 438 468 3e-9 BLAST
Predicted Effect probably benign
Transcript: ENSMUST00000130319
SMART Domains Protein: ENSMUSP00000116811
Gene: ENSMUSG00000002343

DomainStartEndE-ValueType
Blast:UTG 14 78 8e-30 BLAST
Predicted Effect noncoding transcript
Transcript: ENSMUST00000135931
Predicted Effect noncoding transcript
Transcript: ENSMUST00000136666
Predicted Effect noncoding transcript
Transcript: ENSMUST00000139765
Predicted Effect noncoding transcript
Transcript: ENSMUST00000147387
Coding Region Coverage
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The function of this gene's protein product has not been determined. A related protein in mouse suggests that this protein has a conserved function. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Nov 2010]
Allele List at MGI
Other mutations in this stock
Total: 41 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abcc6 A G 7: 45,626,840 (GRCm39) C1406R probably damaging Het
Acp2 T A 2: 91,038,678 (GRCm39) probably null Het
Antxr2 A C 5: 98,125,454 (GRCm39) probably null Het
Arhgef11 C T 3: 87,590,854 (GRCm39) R32C probably damaging Het
Btnl2 G T 17: 34,582,213 (GRCm39) G260* probably null Het
Ccnf A G 17: 24,445,513 (GRCm39) S551P probably benign Het
Cdh19 A G 1: 110,882,382 (GRCm39) S37P probably benign Het
Cntnap3 T A 13: 64,909,850 (GRCm39) T752S probably damaging Het
Crispld1 A G 1: 17,799,064 (GRCm39) M62V probably benign Het
Ddr1 G A 17: 35,994,372 (GRCm39) A801V probably damaging Het
Dner G T 1: 84,361,747 (GRCm39) Q621K probably damaging Het
Dph6 A G 2: 114,366,004 (GRCm39) probably null Het
Dpp3 T G 19: 4,968,343 (GRCm39) H243P probably benign Het
Eif3j2 T A 18: 43,610,431 (GRCm39) K127N probably damaging Het
Esrp1 G A 4: 11,361,202 (GRCm39) R315C probably damaging Het
Gm973 A C 1: 59,621,582 (GRCm39) H574P probably benign Het
Gprasp1 G A X: 134,701,288 (GRCm39) V494I probably benign Het
Hbb-bh1 T A 7: 103,492,017 (GRCm39) K66* probably null Het
Hoxb9 T A 11: 96,165,651 (GRCm39) M240K probably damaging Het
Irf2 T C 8: 47,260,788 (GRCm39) probably null Het
Lgi4 A G 7: 30,766,688 (GRCm39) probably null Het
Mylk3 C T 8: 86,081,805 (GRCm39) V328M probably benign Het
Nf2 T C 11: 4,798,873 (GRCm39) E38G probably null Het
Or4k40 A C 2: 111,250,657 (GRCm39) L213R probably damaging Het
Or51l14 A T 7: 103,100,978 (GRCm39) K145* probably null Het
Pdpk1 A G 17: 24,298,612 (GRCm39) F346L probably damaging Het
Prex1 T C 2: 166,419,806 (GRCm39) Y1120C probably damaging Het
Rab3gap1 A G 1: 127,865,237 (GRCm39) T742A probably benign Het
Scai A T 2: 38,989,429 (GRCm39) D401E probably benign Het
Scd1 T C 19: 44,386,533 (GRCm39) H298R probably damaging Het
Shld2 T C 14: 33,990,235 (GRCm39) R224G probably benign Het
Slc45a1 A G 4: 150,723,176 (GRCm39) probably benign Het
Smim10l1 G T 6: 133,082,471 (GRCm39) R6L probably damaging Het
Spag5 T G 11: 78,210,860 (GRCm39) F921C probably damaging Het
Sun1 T C 5: 139,227,186 (GRCm39) S667P probably damaging Het
Tas2r124 A G 6: 132,732,524 (GRCm39) I278V probably benign Het
Thbs1 G A 2: 117,943,999 (GRCm39) D206N probably benign Het
Trim37 T A 11: 87,058,256 (GRCm39) probably benign Het
Vcp T C 4: 42,988,728 (GRCm39) T249A possibly damaging Het
Vmn2r103 A G 17: 20,014,231 (GRCm39) N341S possibly damaging Het
Zmat3 A G 3: 32,399,732 (GRCm39) probably benign Het
Other mutations in Armc6
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL03090:Armc6 APN 8 70,684,004 (GRCm39) missense probably benign 0.00
R1449:Armc6 UTSW 8 70,677,943 (GRCm39) missense probably benign 0.01
R1557:Armc6 UTSW 8 70,678,098 (GRCm39) missense possibly damaging 0.75
R1689:Armc6 UTSW 8 70,682,187 (GRCm39) missense probably benign
R3054:Armc6 UTSW 8 70,677,799 (GRCm39) missense probably benign 0.12
R4368:Armc6 UTSW 8 70,677,943 (GRCm39) missense probably benign 0.01
R6654:Armc6 UTSW 8 70,684,025 (GRCm39) missense probably damaging 0.99
R7726:Armc6 UTSW 8 70,675,248 (GRCm39) missense probably damaging 1.00
R8340:Armc6 UTSW 8 70,673,502 (GRCm39) missense probably damaging 1.00
X0022:Armc6 UTSW 8 70,675,192 (GRCm39) missense probably benign 0.20
Posted On 2015-04-16