Incidental Mutation 'IGL02499:Nemf'
ID295938
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Nemf
Ensembl Gene ENSMUSG00000020982
Gene Namenuclear export mediator factor
Synonyms1500011I12Rik, 4933405E14Rik, Sdccag1
Accession Numbers
Is this an essential gene? Probably essential (E-score: 0.775) question?
Stock #IGL02499
Quality Score
Status
Chromosome12
Chromosomal Location69310522-69357165 bp(-) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) T to A at 69322129 bp
ZygosityHeterozygous
Amino Acid Change Isoleucine to Phenylalanine at position 771 (I771F)
Ref Sequence ENSEMBL: ENSMUSP00000021368 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000021368]
Predicted Effect probably damaging
Transcript: ENSMUST00000021368
AA Change: I771F

PolyPhen 2 Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
SMART Domains Protein: ENSMUSP00000021368
Gene: ENSMUSG00000020982
AA Change: I771F

DomainStartEndE-ValueType
Pfam:FbpA 6 523 5.5e-42 PFAM
Pfam:DUF814 530 630 9e-27 PFAM
low complexity region 697 708 N/A INTRINSIC
low complexity region 861 879 N/A INTRINSIC
low complexity region 894 918 N/A INTRINSIC
Pfam:DUF3441 956 1055 9.8e-33 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000220674
Predicted Effect noncoding transcript
Transcript: ENSMUST00000221722
Predicted Effect noncoding transcript
Transcript: ENSMUST00000221794
Coding Region Coverage
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a component of the ribosome quality control complex. The encoded protein facilitates the recognition and ubiquitination of stalled 60S subunits by the ubiquitin ligase listerin. A similar protein in fly functions as a tumor suppressor. [provided by RefSeq, Jul 2016]
Allele List at MGI
Other mutations in this stock
Total: 57 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
A930011G23Rik A G 5: 99,229,377 S404P probably damaging Het
A930011G23Rik G A 5: 99,229,382 P402L probably damaging Het
Abcb1a A G 5: 8,726,807 N835S possibly damaging Het
Abr A T 11: 76,509,090 F27Y probably benign Het
Adam5 C T 8: 24,781,565 probably null Het
Alas1 A T 9: 106,241,321 Y201N probably damaging Het
Aldoart1 T A 4: 72,852,239 R111W possibly damaging Het
Arhgef25 A G 10: 127,185,591 Y253H probably damaging Het
Arhgef28 G T 13: 97,953,783 A1076E possibly damaging Het
Baz2b C T 2: 59,901,496 R2066K possibly damaging Het
Bdh1 G T 16: 31,438,048 R5L possibly damaging Het
Brap A G 5: 121,679,871 Y358C probably damaging Het
Cad T C 5: 31,069,604 V1235A probably damaging Het
Cadps G T 14: 12,822,725 S5* probably null Het
Cd200r2 A G 16: 44,914,585 T220A possibly damaging Het
Cd209e T A 8: 3,854,238 M6L probably benign Het
Cdh23 G T 10: 60,385,179 T1265K probably damaging Het
Clec16a T C 16: 10,694,676 S828P probably benign Het
Dao A G 5: 114,013,941 K107E possibly damaging Het
Dnah6 T A 6: 73,021,227 M4071L probably benign Het
Dvl1 T C 4: 155,854,780 I250T probably benign Het
Dzip3 A C 16: 48,933,850 L945V probably damaging Het
Gm128 A G 3: 95,240,681 S101P possibly damaging Het
Gm4951 T C 18: 60,245,638 S82P probably damaging Het
Gphn T C 12: 78,492,300 L240P probably benign Het
Hecw2 A G 1: 53,926,488 I393T probably benign Het
Kat14 A G 2: 144,393,831 E161G probably benign Het
Kcne3 A C 7: 100,184,403 I76L probably benign Het
Kcnk18 A T 19: 59,235,182 Q253L probably benign Het
Kmt2a T C 9: 44,830,509 probably benign Het
Lrrc73 A G 17: 46,256,989 probably benign Het
Mki67 A G 7: 135,694,327 S2993P possibly damaging Het
Mto1 T A 9: 78,461,512 probably benign Het
Myo9a T A 9: 59,815,386 probably benign Het
Myt1 G A 2: 181,825,549 probably benign Het
Ncoa7 T C 10: 30,690,889 T587A probably benign Het
Olfr180 A G 16: 58,916,251 L130P probably damaging Het
Olfr250 A T 9: 38,367,681 Y45F probably benign Het
Olfr370 T A 8: 83,541,183 V13D possibly damaging Het
Papln T C 12: 83,780,671 V761A probably benign Het
Pask A T 1: 93,321,095 L861* probably null Het
Pcdh18 T A 3: 49,753,447 R859S probably benign Het
Ppip5k1 C T 2: 121,331,553 probably null Het
Ptprs A G 17: 56,437,884 V284A probably damaging Het
Rasgrp4 A T 7: 29,151,503 probably benign Het
Rp1 T C 1: 4,349,048 I614V probably benign Het
Sec23ip T C 7: 128,776,916 I818T probably damaging Het
Skint11 G A 4: 114,194,604 A50T probably benign Het
Sqor T A 2: 122,808,087 M417K possibly damaging Het
Tbc1d24 T C 17: 24,207,619 probably null Het
Tbc1d8b A T X: 139,712,424 D333V probably damaging Het
Tbx2 T C 11: 85,840,913 S679P possibly damaging Het
Thbs2 A G 17: 14,684,066 probably benign Het
Ttn T C 2: 76,859,451 probably benign Het
Vmn2r28 A T 7: 5,490,569 I126N probably damaging Het
Zbtb10 G T 3: 9,251,740 G204V probably damaging Het
Zfp426 A C 9: 20,473,118 probably benign Het
Other mutations in Nemf
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01508:Nemf APN 12 69344986 splice site probably benign
IGL03352:Nemf APN 12 69331905 missense probably damaging 1.00
kaempfer UTSW 12 69352336 missense probably benign 0.01
R0335:Nemf UTSW 12 69353803 missense probably benign 0.16
R0538:Nemf UTSW 12 69356314 missense probably damaging 1.00
R0581:Nemf UTSW 12 69322271 missense probably benign
R0909:Nemf UTSW 12 69341610 missense probably damaging 1.00
R1792:Nemf UTSW 12 69312569 missense probably damaging 1.00
R1899:Nemf UTSW 12 69346378 missense probably null
R2080:Nemf UTSW 12 69353786 splice site probably benign
R3704:Nemf UTSW 12 69331130 missense probably damaging 1.00
R3842:Nemf UTSW 12 69331949 missense probably damaging 0.98
R4471:Nemf UTSW 12 69314442 missense probably benign 0.04
R4666:Nemf UTSW 12 69312280 missense probably damaging 1.00
R4720:Nemf UTSW 12 69324288 missense probably benign 0.05
R5198:Nemf UTSW 12 69356047 missense probably damaging 1.00
R5474:Nemf UTSW 12 69316335 missense probably benign 0.03
R6893:Nemf UTSW 12 69352336 missense probably benign 0.01
R7008:Nemf UTSW 12 69341621 missense possibly damaging 0.91
R7008:Nemf UTSW 12 69353793 critical splice donor site probably null
R7098:Nemf UTSW 12 69312467 missense probably damaging 1.00
Posted On2015-04-16