Incidental Mutation 'IGL02641:Lce1c'
ID 301736
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Lce1c
Ensembl Gene ENSMUSG00000042092
Gene Name late cornified envelope 1C
Synonyms 1110014K05Rik
Accession Numbers
Essential gene? Probably non essential (E-score: 0.151) question?
Stock # IGL02641
Quality Score
Status
Chromosome 3
Chromosomal Location 92586554-92588225 bp(+) (GRCm39)
Type of Mutation unclassified
DNA Base Change (assembly) C to A at 92587845 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000029524 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000029524] [ENSMUST00000047055]
AlphaFold Q9D1C5
Predicted Effect probably benign
Transcript: ENSMUST00000029524
SMART Domains Protein: ENSMUSP00000029524
Gene: ENSMUSG00000103243

DomainStartEndE-ValueType
Pfam:LCE 25 67 1.3e-12 PFAM
Pfam:LCE 64 133 2.6e-9 PFAM
Predicted Effect unknown
Transcript: ENSMUST00000047055
AA Change: H91N
SMART Domains Protein: ENSMUSP00000045573
Gene: ENSMUSG00000042092
AA Change: H91N

DomainStartEndE-ValueType
Pfam:LCE 25 66 1.1e-12 PFAM
Pfam:LCE 64 124 5.4e-11 PFAM
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 30 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
3100002H09Rik A T 4: 124,504,510 (GRCm39) M14K unknown Het
Arhgap24 T C 5: 103,040,386 (GRCm39) V441A probably damaging Het
Cdv3 G T 9: 103,241,223 (GRCm39) Q115K probably damaging Het
Clstn1 G T 4: 149,713,968 (GRCm39) G207C probably null Het
Col28a1 A T 6: 8,014,794 (GRCm39) Y870* probably null Het
Creb3 A C 4: 43,563,311 (GRCm39) H136P probably benign Het
Dcaf17 G A 2: 70,912,375 (GRCm39) C320Y probably damaging Het
Fbl T C 7: 27,874,471 (GRCm39) S66P probably damaging Het
Fgfrl1 C A 5: 108,853,731 (GRCm39) S279R probably damaging Het
Gdpgp1 C T 7: 79,888,796 (GRCm39) R276* probably null Het
Hcfc2 A G 10: 82,538,383 (GRCm39) Y140C probably damaging Het
Ighg3 A G 12: 113,323,818 (GRCm39) I190T unknown Het
Itgav T C 2: 83,598,689 (GRCm39) probably benign Het
Ldoc1 G A X: 60,753,419 (GRCm39) C35Y probably damaging Het
Lrp10 T A 14: 54,706,068 (GRCm39) C419* probably null Het
Micall2 T C 5: 139,705,094 (GRCm39) D80G probably damaging Het
Or5b21 T A 19: 12,839,566 (GRCm39) C142* probably null Het
Pde3b C T 7: 114,130,052 (GRCm39) T869I probably damaging Het
Pip5k1c C A 10: 81,153,155 (GRCm39) probably null Het
Pkhd1 G A 1: 20,628,976 (GRCm39) T657I possibly damaging Het
Pnisr A G 4: 21,860,908 (GRCm39) N197S probably benign Het
Rpl21-ps4 G A 14: 11,227,661 (GRCm38) noncoding transcript Het
Rtn4rl1 A C 11: 75,156,650 (GRCm39) T361P probably damaging Het
Spaca9 C A 2: 28,585,963 (GRCm39) E34* probably null Het
Trip10 T A 17: 57,569,411 (GRCm39) D478E probably benign Het
Tsc22d2 A G 3: 58,323,576 (GRCm39) D156G probably damaging Het
Ufc1 T C 1: 171,117,764 (GRCm39) D50G probably damaging Het
Vmn1r202 T G 13: 22,686,274 (GRCm39) I48L probably benign Het
Vmn2r111 A T 17: 22,792,205 (GRCm39) V17E possibly damaging Het
Vps13a T A 19: 16,676,185 (GRCm39) M1263L probably benign Het
Other mutations in Lce1c
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL02640:Lce1c APN 3 92,587,845 (GRCm39) unclassified probably benign
IGL02642:Lce1c APN 3 92,587,845 (GRCm39) unclassified probably benign
R2007:Lce1c UTSW 3 92,587,765 (GRCm39) missense unknown
R7401:Lce1c UTSW 3 92,587,623 (GRCm39) missense unknown
R7489:Lce1c UTSW 3 92,587,954 (GRCm39) missense unknown
Posted On 2015-04-16