Incidental Mutation 'R4278:Gm9857'
ID 322758
Institutional Source Beutler Lab
Gene Symbol Gm9857
Ensembl Gene ENSMUSG00000051638
Gene Name predicted gene 9857
Synonyms
MMRRC Submission 068968-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.077) question?
Stock # R4278 (G1)
Quality Score 225
Status Not validated
Chromosome 3
Chromosomal Location 108847189-108847762 bp(-) (GRCm39)
Type of Mutation utr 5 prime
DNA Base Change (assembly) T to C at 108847419 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000143304 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000050914] [ENSMUST00000059946] [ENSMUST00000098680] [ENSMUST00000106586] [ENSMUST00000196400] [ENSMUST00000196533] [ENSMUST00000197427]
AlphaFold no structure available at present
Predicted Effect unknown
Transcript: ENSMUST00000050914
AA Change: R115G
SMART Domains Protein: ENSMUSP00000052414
Gene: ENSMUSG00000051638
AA Change: R115G

DomainStartEndE-ValueType
signal peptide 1 23 N/A INTRINSIC
low complexity region 109 127 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000059946
SMART Domains Protein: ENSMUSP00000054829
Gene: ENSMUSG00000045662

DomainStartEndE-ValueType
Pfam:Methyltransf_23 32 207 4.8e-9 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000098680
SMART Domains Protein: ENSMUSP00000096277
Gene: ENSMUSG00000045662

DomainStartEndE-ValueType
Pfam:Methyltransf_23 32 206 6.1e-12 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000106586
SMART Domains Protein: ENSMUSP00000102196
Gene: ENSMUSG00000045662

DomainStartEndE-ValueType
Pfam:Methyltransf_23 32 206 1.9e-11 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000196400
SMART Domains Protein: ENSMUSP00000143561
Gene: ENSMUSG00000045662

DomainStartEndE-ValueType
PDB:3HTX|D 9 90 7e-7 PDB
SCOP:d1khha_ 9 90 9e-3 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000196533
SMART Domains Protein: ENSMUSP00000143574
Gene: ENSMUSG00000045662

DomainStartEndE-ValueType
PDB:3JWG|A 8 192 2e-34 PDB
SCOP:d1fp2a2 9 154 5e-7 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000197427
Predicted Effect noncoding transcript
Transcript: ENSMUST00000197884
Coding Region Coverage
  • 1x: 99.3%
  • 3x: 98.7%
  • 10x: 97.4%
  • 20x: 95.4%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 30 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Anln A G 9: 22,245,296 (GRCm39) probably null Het
Arl6ip1 AAAATAAATAAATAAATAAATAAATA AAAATAAATAAATAAATAAATAAATAAATA 7: 117,721,122 (GRCm39) probably benign Het
Bltp3b T G 10: 89,642,571 (GRCm39) probably null Het
Capza3 T A 6: 139,987,786 (GRCm39) Y128* probably null Het
Ccdc187 T A 2: 26,172,239 (GRCm39) probably benign Het
Dpp4 T C 2: 62,209,667 (GRCm39) R119G probably damaging Het
Espn T C 4: 152,218,874 (GRCm39) D308G probably damaging Het
Hhatl G A 9: 121,613,285 (GRCm39) A470V probably benign Het
Igfals A T 17: 25,100,191 (GRCm39) E427D probably benign Het
Il22ra1 C T 4: 135,478,024 (GRCm39) A365V possibly damaging Het
Kctd6 G C 14: 8,222,806 (GRCm38) R216P probably damaging Het
Lama1 A T 17: 68,098,512 (GRCm39) M1864L probably null Het
Mbd5 T G 2: 49,162,305 (GRCm39) I37S probably damaging Het
Nsf C A 11: 103,821,632 (GRCm39) A5S probably damaging Het
Nsun5 A G 5: 135,398,914 (GRCm39) Y26C probably damaging Het
Or9q1 A G 19: 13,805,793 (GRCm39) probably benign Het
Pitpnm3 C T 11: 71,965,342 (GRCm39) V164I probably damaging Het
Plk2 A G 13: 110,532,637 (GRCm39) K117R probably benign Het
Ppp1r13b G T 12: 111,796,818 (GRCm39) N908K probably damaging Het
Rapgef4 T A 2: 72,028,739 (GRCm39) N385K possibly damaging Het
Rbp3 G A 14: 33,680,607 (GRCm39) V1070I probably benign Het
Rhbdd3 C T 11: 5,055,329 (GRCm39) T226I probably benign Het
Slc27a3 C T 3: 90,296,495 (GRCm39) probably benign Het
Slc30a2 G A 4: 134,073,360 (GRCm39) E136K probably null Het
Sptlc2 A C 12: 87,382,925 (GRCm39) I393R probably benign Het
Tmem260 C T 14: 48,715,093 (GRCm39) T249M probably damaging Het
Ttn T A 2: 76,585,168 (GRCm39) I22042F probably damaging Het
Vmn1r80 G T 7: 11,927,454 (GRCm39) C188F probably benign Het
Vwa2 C A 19: 56,891,915 (GRCm39) Q283K probably benign Het
Zfp52 A G 17: 21,782,132 (GRCm39) K660R probably benign Het
Other mutations in Gm9857
AlleleSourceChrCoordTypePredicted EffectPPH Score
R1670:Gm9857 UTSW 3 108,847,478 (GRCm39) start gained probably benign
R5997:Gm9857 UTSW 3 108,847,481 (GRCm39) utr 5 prime probably benign
R6647:Gm9857 UTSW 3 108,847,379 (GRCm39) utr 5 prime probably benign
R7181:Gm9857 UTSW 3 108,847,554 (GRCm39) missense unknown
R7357:Gm9857 UTSW 3 108,847,478 (GRCm39) missense unknown
Predicted Primers PCR Primer
(F):5'- TCTAAGATCAGACAGCCCTTAAAG -3'
(R):5'- GTCATTTAACGGCCGCTGTG -3'

Sequencing Primer
(F):5'- CAGACAGCCCTTAAAGTGTATATGG -3'
(R):5'- GCCCTGAAGACATTTTCC -3'
Posted On 2015-06-20