Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL01356:Pate13'

75532

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Pate13

Ensembl Gene

ENSMUSG00000078934

Gene Name

prostate and testis expressed 13

Synonyms

9230113P08Rik

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.054) question?

Stock #

IGL01356

Quality Score

Status

Chromosome

Chromosomal Location

35819719-35822092 bp(+) (GRCm39)

Type of Mutation

nonsense

DNA Base Change (assembly)

T to A at 35820244 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Cysteine to Stop codon at position 33 (C33*)

Ref Sequence

ENSEMBL: ENSMUSP00000135716 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000176049] [ENSMUST00000176153]

AlphaFold

D3YWX3

Predicted Effect

probably benign
Transcript: ENSMUST00000176049

Predicted Effect

probably null
Transcript: ENSMUST00000176153
AA Change: C33*

SMART Domains

Protein: ENSMUSP00000135716
Gene: ENSMUSG00000078934
AA Change: C33*

Domain	Start	End	E-Value	Type
signal peptide	1	20	N/A	INTRINSIC

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 36 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
AA474408	T	C	7: 109,660,189 (GRCm39)		probably benign	Het
Acsl1	T	C	8: 46,964,500 (GRCm39)		probably null	Het
Adck2	T	C	6: 39,560,854 (GRCm39)	V463A	probably benign	Het
Armh3	C	T	19: 45,954,742 (GRCm39)	C149Y	possibly damaging	Het
B4galt4	T	A	16: 38,574,506 (GRCm39)	I224N	probably damaging	Het
Caprin1	T	C	2: 103,605,801 (GRCm39)	T396A	probably benign	Het
Cbx3	T	C	6: 51,452,281 (GRCm39)	V32A	probably damaging	Het
Chd1	A	T	17: 15,970,127 (GRCm39)	K960I	probably damaging	Het
Cldn4	A	G	5: 134,975,343 (GRCm39)	I86T	probably benign	Het
Cst12	A	C	2: 148,631,468 (GRCm39)	D50A	probably damaging	Het
Dock10	A	G	1: 80,501,459 (GRCm39)	Y1864H	probably damaging	Het
Dscaml1	G	A	9: 45,658,155 (GRCm39)	G1642E	probably benign	Het
Jakmip3	T	C	7: 138,619,341 (GRCm39)	L241P	probably damaging	Het
Kdm1a	C	T	4: 136,281,202 (GRCm39)	R669H	probably damaging	Het
Lin54	G	A	5: 100,601,876 (GRCm39)	P455S	probably damaging	Het
Lrig1	A	G	6: 94,631,901 (GRCm39)	Y100H	probably benign	Het
Lrig1	G	A	6: 94,586,874 (GRCm39)	P601S	probably damaging	Het
Mtrf1	A	G	14: 79,660,865 (GRCm39)	D419G	probably benign	Het
Naca	C	T	10: 127,877,584 (GRCm39)		probably benign	Het
Naip1	A	G	13: 100,559,722 (GRCm39)	L1094P	probably damaging	Het
Nell2	A	T	15: 95,127,064 (GRCm39)	N770K	probably damaging	Het
Notch4	A	G	17: 34,800,000 (GRCm39)	H987R	possibly damaging	Het
Or2a52	T	A	6: 43,144,324 (GRCm39)	C111S	probably damaging	Het
Or5p63	T	A	7: 107,810,933 (GRCm39)	I268F	probably benign	Het
Or7g26	T	A	9: 19,230,238 (GRCm39)	M142K	probably damaging	Het
Plcg1	G	T	2: 160,595,813 (GRCm39)	G561W	probably damaging	Het
Ripor3	T	A	2: 167,835,495 (GRCm39)	M159L	probably benign	Het
Serpinb6a	A	G	13: 34,109,400 (GRCm39)	S111P	possibly damaging	Het
Tas1r3	A	T	4: 155,945,784 (GRCm39)	H537Q	probably benign	Het
Tefm	G	A	11: 80,028,823 (GRCm39)	R43*	probably null	Het
Tiam1	A	G	16: 89,634,676 (GRCm39)	V878A	probably damaging	Het
Vmn1r203	A	G	13: 22,708,947 (GRCm39)	S243G	probably damaging	Het
Vmn2r124	G	T	17: 18,293,733 (GRCm39)	V607L	probably benign	Het
Vps8	T	G	16: 21,336,107 (GRCm39)		probably null	Het
Ythdf2	A	T	4: 131,932,661 (GRCm39)	D166E	possibly damaging	Het
Zan	A	G	5: 137,434,694 (GRCm39)	V2203A	unknown	Het

Other mutations in Pate13

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
R1912:Pate13	UTSW	9	35,819,915 (GRCm39)	missense	probably benign	0.37
R4654:Pate13	UTSW	9	35,820,287 (GRCm39)	missense	probably damaging	0.98
R6465:Pate13	UTSW	9	35,819,921 (GRCm39)	missense	possibly damaging	0.92
R6547:Pate13	UTSW	9	35,819,781 (GRCm39)	missense	probably null	0.00
R6790:Pate13	UTSW	9	35,820,127 (GRCm39)	intron	probably benign
R6961:Pate13	UTSW	9	35,819,740 (GRCm39)	start codon destroyed	probably null	0.46
R7996:Pate13	UTSW	9	35,820,650 (GRCm39)	missense	probably damaging	0.96
R8321:Pate13	UTSW	9	35,820,749 (GRCm39)	missense	probably damaging	0.97
R8748:Pate13	UTSW	9	35,820,351 (GRCm39)	missense	probably damaging	1.00
R9650:Pate13	UTSW	9	35,820,799 (GRCm39)	missense	probably benign

Posted On

2013-10-07