Incidental Mutation 'IGL01755:Tspan8'
| ID |
153182 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Tspan8
|
| Ensembl Gene |
ENSMUSG00000034127 |
| Gene Name |
tetraspanin 8 |
| Synonyms |
Tm4sf3, E330007O21Rik |
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.060)
|
| Stock # |
IGL01755
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
10 |
| Chromosomal Location |
115652737-115685798 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
C to T
at 115671203 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Threonine to Methionine
at position 120
(T120M)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000136645
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000035563]
[ENSMUST00000080630]
[ENSMUST00000179196]
[ENSMUST00000217900]
|
| AlphaFold |
Q8R3G9 |
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000035563
AA Change: T120M
PolyPhen 2
Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
|
| SMART Domains |
Protein: ENSMUSP00000049243
Gene: ENSMUSG00000034127
AA Change: T120M
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:Tetraspannin
|
7 |
232 |
4.8e-51 |
PFAM |
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000080630
AA Change: T120M
PolyPhen 2
Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
|
| SMART Domains |
Protein: ENSMUSP00000079463
Gene: ENSMUSG00000034127
AA Change: T120M
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:Tetraspannin
|
7 |
232 |
8.3e-52 |
PFAM |
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000179196
AA Change: T120M
PolyPhen 2
Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
|
| SMART Domains |
Protein: ENSMUSP00000136645
Gene: ENSMUSG00000034127
AA Change: T120M
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:Tetraspannin
|
7 |
232 |
8.3e-52 |
PFAM |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000217900
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000220081
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene is a member of the transmembrane 4 superfamily, also known as the tetraspanin family. Most of these members are cell-surface proteins that are characterized by the presence of four hydrophobic domains. The proteins mediate signal transduction events that play a role in the regulation of cell development, activation, growth and motility. This encoded protein is a cell surface glycoprotein that is known to complex with integrins. This gene is expressed in different carcinomas. The use of alternate polyadenylation sites has been found for this gene. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 27 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Atf6 |
A |
G |
1: 170,616,180 (GRCm39) |
I520T |
possibly damaging |
Het |
| Azgp1 |
A |
T |
5: 137,988,109 (GRCm39) |
K297M |
possibly damaging |
Het |
| Cyp2e1 |
A |
G |
7: 140,354,469 (GRCm39) |
|
probably null |
Het |
| Dapk1 |
C |
A |
13: 60,908,989 (GRCm39) |
L1201M |
probably damaging |
Het |
| Dapk1 |
T |
A |
13: 60,908,990 (GRCm39) |
L1201Q |
possibly damaging |
Het |
| Insrr |
A |
T |
3: 87,721,493 (GRCm39) |
D1133V |
probably damaging |
Het |
| Kcnc4 |
T |
C |
3: 107,355,491 (GRCm39) |
N319S |
probably damaging |
Het |
| Kctd1 |
A |
G |
18: 15,195,694 (GRCm39) |
C310R |
possibly damaging |
Het |
| Nefl |
A |
G |
14: 68,323,526 (GRCm39) |
D384G |
probably damaging |
Het |
| Nfatc3 |
A |
G |
8: 106,854,553 (GRCm39) |
N1029S |
probably benign |
Het |
| Nup107 |
T |
C |
10: 117,610,398 (GRCm39) |
Y348C |
probably damaging |
Het |
| Or5b117 |
T |
C |
19: 13,431,179 (GRCm39) |
K234R |
probably damaging |
Het |
| Or5w8 |
T |
A |
2: 87,687,854 (GRCm39) |
C112S |
possibly damaging |
Het |
| Phf8-ps |
T |
A |
17: 33,285,951 (GRCm39) |
N284Y |
probably damaging |
Het |
| Phldb2 |
T |
C |
16: 45,645,945 (GRCm39) |
E212G |
probably damaging |
Het |
| Pirb |
A |
T |
7: 3,720,169 (GRCm39) |
N401K |
probably benign |
Het |
| Plcg2 |
T |
C |
8: 118,347,980 (GRCm39) |
F1183S |
possibly damaging |
Het |
| Plekhf2 |
A |
T |
4: 10,991,308 (GRCm39) |
N11K |
probably damaging |
Het |
| Slc7a11 |
A |
G |
3: 50,378,516 (GRCm39) |
Y241H |
probably benign |
Het |
| Sltm |
T |
G |
9: 70,491,204 (GRCm39) |
|
probably null |
Het |
| Taf4b |
A |
G |
18: 15,031,042 (GRCm39) |
T809A |
probably benign |
Het |
| Taf4b |
C |
A |
18: 15,031,043 (GRCm39) |
T809N |
probably benign |
Het |
| Tesk1 |
T |
C |
4: 43,445,820 (GRCm39) |
|
probably null |
Het |
| Ttn |
T |
G |
2: 76,551,727 (GRCm39) |
D31275A |
probably damaging |
Het |
| Vcl |
C |
A |
14: 21,046,038 (GRCm39) |
Q334K |
probably damaging |
Het |
| Zfp94 |
G |
A |
7: 24,010,906 (GRCm39) |
|
probably benign |
Het |
| Zkscan17 |
A |
G |
11: 59,378,241 (GRCm39) |
F314S |
probably damaging |
Het |
|
| Other mutations in Tspan8 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00972:Tspan8
|
APN |
10 |
115,680,044 (GRCm39) |
splice site |
probably benign |
|
|
IGL01738:Tspan8
|
APN |
10 |
115,653,570 (GRCm39) |
splice site |
probably null |
|
|
IGL01993:Tspan8
|
APN |
10 |
115,675,913 (GRCm39) |
splice site |
probably benign |
|
|
IGL02369:Tspan8
|
APN |
10 |
115,675,783 (GRCm39) |
missense |
probably benign |
0.44 |
|
IGL02369:Tspan8
|
APN |
10 |
115,675,782 (GRCm39) |
missense |
probably benign |
0.01 |
|
BB001:Tspan8
|
UTSW |
10 |
115,669,229 (GRCm39) |
critical splice donor site |
probably null |
|
|
BB011:Tspan8
|
UTSW |
10 |
115,669,229 (GRCm39) |
critical splice donor site |
probably null |
|
|
PIT4131001:Tspan8
|
UTSW |
10 |
115,653,515 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1269:Tspan8
|
UTSW |
10 |
115,685,287 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R1693:Tspan8
|
UTSW |
10 |
115,679,949 (GRCm39) |
splice site |
probably benign |
|
|
R1850:Tspan8
|
UTSW |
10 |
115,669,130 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R1975:Tspan8
|
UTSW |
10 |
115,680,035 (GRCm39) |
missense |
probably benign |
0.00 |
|
R1976:Tspan8
|
UTSW |
10 |
115,680,035 (GRCm39) |
missense |
probably benign |
0.00 |
|
R1977:Tspan8
|
UTSW |
10 |
115,680,035 (GRCm39) |
missense |
probably benign |
0.00 |
|
R4058:Tspan8
|
UTSW |
10 |
115,671,187 (GRCm39) |
nonsense |
probably null |
|
|
R4059:Tspan8
|
UTSW |
10 |
115,671,187 (GRCm39) |
nonsense |
probably null |
|
|
R4999:Tspan8
|
UTSW |
10 |
115,653,534 (GRCm39) |
missense |
possibly damaging |
0.91 |
|
R5879:Tspan8
|
UTSW |
10 |
115,669,156 (GRCm39) |
missense |
possibly damaging |
0.89 |
|
R6290:Tspan8
|
UTSW |
10 |
115,663,729 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R6358:Tspan8
|
UTSW |
10 |
115,669,132 (GRCm39) |
missense |
probably benign |
0.12 |
|
R6524:Tspan8
|
UTSW |
10 |
115,679,984 (GRCm39) |
missense |
probably benign |
|
|
R7924:Tspan8
|
UTSW |
10 |
115,669,229 (GRCm39) |
critical splice donor site |
probably null |
|
|
R8139:Tspan8
|
UTSW |
10 |
115,675,802 (GRCm39) |
missense |
probably benign |
0.01 |
|
R9427:Tspan8
|
UTSW |
10 |
115,669,213 (GRCm39) |
missense |
probably damaging |
1.00 |
|
| Posted On |
2014-02-04 |
Incidental Mutation