Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL02146:Slc11a2'

281773

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Slc11a2

Ensembl Gene

ENSMUSG00000023030

Gene Name

solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2

Synonyms

DMT1, Nramp2, van, microcytic anemia, viable anaemia, DCT1

Accession Numbers

Essential gene?

Possibly essential (E-score: 0.724) question?

Stock #

IGL02146

Quality Score

Status

Chromosome

Chromosomal Location

100285779-100322090 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 100299169 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Asparagine to Aspartic acid at position 443 (N443D)

Ref Sequence

ENSEMBL: ENSMUSP00000116463 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000023774] [ENSMUST00000124324] [ENSMUST00000138843]

AlphaFold

P49282

Predicted Effect

probably damaging
Transcript: ENSMUST00000023774
AA Change: N443D

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000023774
Gene: ENSMUSG00000023030
AA Change: N443D

Domain	Start	End	E-Value	Type
low complexity region	11	26	N/A	INTRINSIC
Pfam:Nramp	90	474	1.1e-122	PFAM
transmembrane domain	505	527	N/A	INTRINSIC

Predicted Effect

probably damaging
Transcript: ENSMUST00000124324
AA Change: N134D

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000114702
Gene: ENSMUSG00000023030
AA Change: N134D

Domain	Start	End	E-Value	Type
Pfam:Nramp	1	165	1.4e-39	PFAM
transmembrane domain	196	218	N/A	INTRINSIC

Predicted Effect

probably damaging
Transcript: ENSMUST00000138843
AA Change: N443D

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000116463
Gene: ENSMUSG00000023030
AA Change: N443D

Domain	Start	End	E-Value	Type
low complexity region	11	26	N/A	INTRINSIC
Pfam:Nramp	90	474	4.7e-118	PFAM
transmembrane domain	505	527	N/A	INTRINSIC

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000140535

Coding Region Coverage

Validation Efficiency

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a member of the solute carrier family 11 protein family. The product of this gene transports divalent metals and is involved in iron absorption. Mutations in this gene are associated with hypochromic microcytic anemia with iron overload. A related solute carrier family 11 protein gene is located on chromosome 2. Multiple transcript variants encoding different isoforms have been found for this gene.[provided by RefSeq, Apr 2010]
PHENOTYPE: Homozygotes for a spontaneous mutation exhibit microcytic, hypochromic anemia associated with impaired intestinal iron absorption and erythroblast iron uptake. Mutants have reduced viability and fertility. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 54 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1700017B05Rik	A	G	9: 57,164,023 (GRCm39)	C784R	possibly damaging	Het
Akp3	A	T	1: 87,054,297 (GRCm39)	D278V	probably benign	Het
Atxn7l1	G	T	12: 33,418,030 (GRCm39)	R730S	probably benign	Het
Bag6	A	G	17: 35,355,191 (GRCm39)	T30A	probably damaging	Het
Blk	G	T	14: 63,611,648 (GRCm39)	P429H	probably damaging	Het
Bmp2k	T	A	5: 97,212,689 (GRCm39)	M524K	unknown	Het
Bst1	T	A	5: 43,983,678 (GRCm39)	H221Q	probably damaging	Het
Ces2g	T	C	8: 105,693,576 (GRCm39)	I419T	possibly damaging	Het
Cnep1r1	T	C	8: 88,856,326 (GRCm39)	V34A	probably benign	Het
Ctnnbl1	A	G	2: 157,661,414 (GRCm39)	E308G	probably damaging	Het
Cyp20a1	A	T	1: 60,410,410 (GRCm39)	K237I	possibly damaging	Het
Dlg5	T	C	14: 24,252,429 (GRCm39)	T104A	probably damaging	Het
Dnaaf11	C	T	15: 66,361,374 (GRCm39)	W42*	probably null	Het
Dnaaf11	C	A	15: 66,361,375 (GRCm39)	W42L	probably benign	Het
Dnah9	C	T	11: 65,818,526 (GRCm39)	V3271M	probably damaging	Het
Eed	T	A	7: 89,618,803 (GRCm39)	N204Y	possibly damaging	Het
Fat3	A	G	9: 15,910,878 (GRCm39)	V1708A	probably benign	Het
Fcrl6	T	C	1: 172,426,264 (GRCm39)	T178A	probably benign	Het
Galnt4	A	C	10: 98,945,563 (GRCm39)	K429N	possibly damaging	Het
Ints6	T	A	14: 62,996,709 (GRCm39)	T94S	possibly damaging	Het
Iqsec3	A	T	6: 121,360,916 (GRCm39)	S981T	probably damaging	Het
Itga9	T	A	9: 118,663,400 (GRCm39)	S146T	possibly damaging	Het
Itpr3	A	G	17: 27,336,249 (GRCm39)	Y2325C	probably damaging	Het
Kng2	T	A	16: 22,806,582 (GRCm39)	Q539L	probably damaging	Het
Lmtk3	T	A	7: 45,444,371 (GRCm39)		probably benign	Het
Map1a	T	C	2: 121,129,927 (GRCm39)	Y248H	probably damaging	Het
Mroh1	A	G	15: 76,318,879 (GRCm39)		probably benign	Het
Mroh2b	T	C	15: 4,980,776 (GRCm39)		probably null	Het
Myo18b	A	T	5: 112,991,151 (GRCm39)	M942K	probably damaging	Het
Myzap	T	A	9: 71,471,730 (GRCm39)	T94S	probably benign	Het
Nebl	C	A	2: 17,353,679 (GRCm39)	R957S	probably damaging	Het
Nexn	A	T	3: 151,952,885 (GRCm39)	D278E	probably benign	Het
Nlgn1	A	T	3: 25,966,846 (GRCm39)	N222K	probably damaging	Het
Or6c76	T	A	10: 129,612,727 (GRCm39)		probably benign	Het
Or8d1	G	A	9: 38,766,654 (GRCm39)	A99T	probably benign	Het
Osbpl6	A	T	2: 76,380,094 (GRCm39)	R79S	possibly damaging	Het
Phip	T	C	9: 82,763,771 (GRCm39)	I1268M	probably benign	Het
Pkd2	G	T	5: 104,637,157 (GRCm39)	R590L	probably damaging	Het
Reg2	G	A	6: 78,382,568 (GRCm39)		probably benign	Het
Scaf1	A	T	7: 44,662,934 (GRCm39)	D26E	probably damaging	Het
Ska1	A	G	18: 74,329,981 (GRCm39)	I253T	possibly damaging	Het
Slc6a12	A	T	6: 121,330,460 (GRCm39)	T155S	probably benign	Het
Slit3	A	G	11: 35,125,675 (GRCm39)	K118R	possibly damaging	Het
Snap23	T	G	2: 120,429,792 (GRCm39)	N212K	probably damaging	Het
Snx13	T	A	12: 35,151,078 (GRCm39)	D346E	probably benign	Het
Sumf1	C	A	6: 108,150,392 (GRCm39)		probably null	Het
Susd2	T	C	10: 75,474,267 (GRCm39)	N479S	possibly damaging	Het
Tiam1	A	G	16: 89,646,569 (GRCm39)	I821T	probably benign	Het
Tll2	C	A	19: 41,086,276 (GRCm39)	V651L	probably benign	Het
Vmn2r1	A	G	3: 64,012,104 (GRCm39)	D655G	probably benign	Het
Vmn2r72	T	C	7: 85,387,170 (GRCm39)	Y798C	probably damaging	Het
Vps13b	A	C	15: 35,646,479 (GRCm39)	I1528L	probably benign	Het
Wdtc1	G	A	4: 133,029,076 (GRCm39)	L337F	probably benign	Het
Zfp128	A	C	7: 12,623,959 (GRCm39)	K109T	possibly damaging	Het

Other mutations in Slc11a2

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00583:Slc11a2	APN	15	100,295,618 (GRCm39)	missense	probably benign
IGL00923:Slc11a2	APN	15	100,295,669 (GRCm39)	missense	probably benign	0.13
IGL01645:Slc11a2	APN	15	100,286,999 (GRCm39)	missense	probably benign	0.05
IGL02397:Slc11a2	APN	15	100,299,530 (GRCm39)	missense	probably damaging	1.00
IGL02534:Slc11a2	APN	15	100,299,207 (GRCm39)	missense	probably benign	0.03
IGL02678:Slc11a2	APN	15	100,310,081 (GRCm39)	missense	possibly damaging	0.71
R0537:Slc11a2	UTSW	15	100,303,679 (GRCm39)	missense	probably damaging	1.00
R0538:Slc11a2	UTSW	15	100,306,097 (GRCm39)	missense	probably damaging	1.00
R1305:Slc11a2	UTSW	15	100,307,963 (GRCm39)	critical splice donor site	probably null
R1750:Slc11a2	UTSW	15	100,299,168 (GRCm39)	missense	probably damaging	1.00
R1752:Slc11a2	UTSW	15	100,303,687 (GRCm39)	missense	probably damaging	1.00
R1895:Slc11a2	UTSW	15	100,301,775 (GRCm39)	missense	probably benign	0.10
R2278:Slc11a2	UTSW	15	100,307,962 (GRCm39)	critical splice donor site	probably null
R2519:Slc11a2	UTSW	15	100,299,204 (GRCm39)	missense	probably damaging	1.00
R4724:Slc11a2	UTSW	15	100,304,219 (GRCm39)	missense	possibly damaging	0.65
R5643:Slc11a2	UTSW	15	100,301,068 (GRCm39)	missense	probably benign
R5667:Slc11a2	UTSW	15	100,301,169 (GRCm39)	missense	probably damaging	1.00
R5671:Slc11a2	UTSW	15	100,301,169 (GRCm39)	missense	probably damaging	1.00
R5994:Slc11a2	UTSW	15	100,295,562 (GRCm39)	missense	probably benign
R7008:Slc11a2	UTSW	15	100,307,205 (GRCm39)	missense	probably damaging	1.00
R7208:Slc11a2	UTSW	15	100,300,213 (GRCm39)	missense	probably benign	0.00
R7547:Slc11a2	UTSW	15	100,295,651 (GRCm39)	missense	possibly damaging	0.83
R7829:Slc11a2	UTSW	15	100,307,142 (GRCm39)	missense	possibly damaging	0.95
R9015:Slc11a2	UTSW	15	100,301,186 (GRCm39)	missense	probably benign	0.12
R9362:Slc11a2	UTSW	15	100,304,236 (GRCm39)	missense	probably damaging	1.00
R9573:Slc11a2	UTSW	15	100,304,225 (GRCm39)	missense	probably damaging	1.00
Z1188:Slc11a2	UTSW	15	100,305,980 (GRCm39)	critical splice donor site	probably null

Posted On

2015-04-16