Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL02146:Atxn7l1'

281790

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Atxn7l1

Ensembl Gene

ENSMUSG00000020564

Gene Name

ataxin 7-like 1

Synonyms

2810423G08Rik, Atxn7l4

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.109) question?

Stock #

IGL02146

Quality Score

Status

Chromosome

Chromosomal Location

33197692-33423184 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

G to T at 33418030 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Arginine to Serine at position 730 (R730S)

Ref Sequence

ENSEMBL: ENSMUSP00000088085 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000090597] [ENSMUST00000125192] [ENSMUST00000146040] [ENSMUST00000154742]

AlphaFold

Q9CZ05

Predicted Effect

probably benign
Transcript: ENSMUST00000090597
AA Change: R730S

PolyPhen 2 Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)

SMART Domains

Protein: ENSMUSP00000088085
Gene: ENSMUSG00000020564
AA Change: R730S

Domain	Start	End	E-Value	Type
low complexity region	4	13	N/A	INTRINSIC
low complexity region	95	110	N/A	INTRINSIC
Pfam:SCA7	143	220	2.5e-31	PFAM
low complexity region	274	288	N/A	INTRINSIC
low complexity region	380	392	N/A	INTRINSIC
low complexity region	471	501	N/A	INTRINSIC
low complexity region	519	538	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000125192

SMART Domains

Protein: ENSMUSP00000118777
Gene: ENSMUSG00000020564

Domain	Start	End	E-Value	Type
low complexity region	95	114	N/A	INTRINSIC
low complexity region	191	206	N/A	INTRINSIC
Pfam:SCA7	246	314	2e-28	PFAM
low complexity region	370	384	N/A	INTRINSIC
low complexity region	476	488	N/A	INTRINSIC
low complexity region	567	597	N/A	INTRINSIC
low complexity region	615	634	N/A	INTRINSIC
low complexity region	792	810	N/A	INTRINSIC

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000126275

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000138617

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000142184

SMART Domains

Protein: ENSMUSP00000116081
Gene: ENSMUSG00000020564

Domain	Start	End	E-Value	Type
low complexity region	25	44	N/A	INTRINSIC
low complexity region	110	128	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000146040

SMART Domains

Protein: ENSMUSP00000122156
Gene: ENSMUSG00000020564

Domain	Start	End	E-Value	Type
low complexity region	95	114	N/A	INTRINSIC
low complexity region	191	206	N/A	INTRINSIC
Pfam:SCA7	246	314	2.3e-28	PFAM
low complexity region	370	384	N/A	INTRINSIC
low complexity region	526	540	N/A	INTRINSIC
low complexity region	578	590	N/A	INTRINSIC
low complexity region	669	699	N/A	INTRINSIC
low complexity region	717	736	N/A	INTRINSIC
low complexity region	894	912	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000154742

SMART Domains

Protein: ENSMUSP00000122982
Gene: ENSMUSG00000020564

Domain	Start	End	E-Value	Type
low complexity region	4	13	N/A	INTRINSIC
low complexity region	95	110	N/A	INTRINSIC
Pfam:SCA7	150	218	1.3e-31	PFAM
low complexity region	274	288	N/A	INTRINSIC
low complexity region	380	392	N/A	INTRINSIC
low complexity region	471	501	N/A	INTRINSIC
low complexity region	519	538	N/A	INTRINSIC
low complexity region	696	714	N/A	INTRINSIC

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 54 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1700017B05Rik	A	G	9: 57,164,023 (GRCm39)	C784R	possibly damaging	Het
Akp3	A	T	1: 87,054,297 (GRCm39)	D278V	probably benign	Het
Bag6	A	G	17: 35,355,191 (GRCm39)	T30A	probably damaging	Het
Blk	G	T	14: 63,611,648 (GRCm39)	P429H	probably damaging	Het
Bmp2k	T	A	5: 97,212,689 (GRCm39)	M524K	unknown	Het
Bst1	T	A	5: 43,983,678 (GRCm39)	H221Q	probably damaging	Het
Ces2g	T	C	8: 105,693,576 (GRCm39)	I419T	possibly damaging	Het
Cnep1r1	T	C	8: 88,856,326 (GRCm39)	V34A	probably benign	Het
Ctnnbl1	A	G	2: 157,661,414 (GRCm39)	E308G	probably damaging	Het
Cyp20a1	A	T	1: 60,410,410 (GRCm39)	K237I	possibly damaging	Het
Dlg5	T	C	14: 24,252,429 (GRCm39)	T104A	probably damaging	Het
Dnaaf11	C	T	15: 66,361,374 (GRCm39)	W42*	probably null	Het
Dnaaf11	C	A	15: 66,361,375 (GRCm39)	W42L	probably benign	Het
Dnah9	C	T	11: 65,818,526 (GRCm39)	V3271M	probably damaging	Het
Eed	T	A	7: 89,618,803 (GRCm39)	N204Y	possibly damaging	Het
Fat3	A	G	9: 15,910,878 (GRCm39)	V1708A	probably benign	Het
Fcrl6	T	C	1: 172,426,264 (GRCm39)	T178A	probably benign	Het
Galnt4	A	C	10: 98,945,563 (GRCm39)	K429N	possibly damaging	Het
Ints6	T	A	14: 62,996,709 (GRCm39)	T94S	possibly damaging	Het
Iqsec3	A	T	6: 121,360,916 (GRCm39)	S981T	probably damaging	Het
Itga9	T	A	9: 118,663,400 (GRCm39)	S146T	possibly damaging	Het
Itpr3	A	G	17: 27,336,249 (GRCm39)	Y2325C	probably damaging	Het
Kng2	T	A	16: 22,806,582 (GRCm39)	Q539L	probably damaging	Het
Lmtk3	T	A	7: 45,444,371 (GRCm39)		probably benign	Het
Map1a	T	C	2: 121,129,927 (GRCm39)	Y248H	probably damaging	Het
Mroh1	A	G	15: 76,318,879 (GRCm39)		probably benign	Het
Mroh2b	T	C	15: 4,980,776 (GRCm39)		probably null	Het
Myo18b	A	T	5: 112,991,151 (GRCm39)	M942K	probably damaging	Het
Myzap	T	A	9: 71,471,730 (GRCm39)	T94S	probably benign	Het
Nebl	C	A	2: 17,353,679 (GRCm39)	R957S	probably damaging	Het
Nexn	A	T	3: 151,952,885 (GRCm39)	D278E	probably benign	Het
Nlgn1	A	T	3: 25,966,846 (GRCm39)	N222K	probably damaging	Het
Or6c76	T	A	10: 129,612,727 (GRCm39)		probably benign	Het
Or8d1	G	A	9: 38,766,654 (GRCm39)	A99T	probably benign	Het
Osbpl6	A	T	2: 76,380,094 (GRCm39)	R79S	possibly damaging	Het
Phip	T	C	9: 82,763,771 (GRCm39)	I1268M	probably benign	Het
Pkd2	G	T	5: 104,637,157 (GRCm39)	R590L	probably damaging	Het
Reg2	G	A	6: 78,382,568 (GRCm39)		probably benign	Het
Scaf1	A	T	7: 44,662,934 (GRCm39)	D26E	probably damaging	Het
Ska1	A	G	18: 74,329,981 (GRCm39)	I253T	possibly damaging	Het
Slc11a2	T	C	15: 100,299,169 (GRCm39)	N443D	probably damaging	Het
Slc6a12	A	T	6: 121,330,460 (GRCm39)	T155S	probably benign	Het
Slit3	A	G	11: 35,125,675 (GRCm39)	K118R	possibly damaging	Het
Snap23	T	G	2: 120,429,792 (GRCm39)	N212K	probably damaging	Het
Snx13	T	A	12: 35,151,078 (GRCm39)	D346E	probably benign	Het
Sumf1	C	A	6: 108,150,392 (GRCm39)		probably null	Het
Susd2	T	C	10: 75,474,267 (GRCm39)	N479S	possibly damaging	Het
Tiam1	A	G	16: 89,646,569 (GRCm39)	I821T	probably benign	Het
Tll2	C	A	19: 41,086,276 (GRCm39)	V651L	probably benign	Het
Vmn2r1	A	G	3: 64,012,104 (GRCm39)	D655G	probably benign	Het
Vmn2r72	T	C	7: 85,387,170 (GRCm39)	Y798C	probably damaging	Het
Vps13b	A	C	15: 35,646,479 (GRCm39)	I1528L	probably benign	Het
Wdtc1	G	A	4: 133,029,076 (GRCm39)	L337F	probably benign	Het
Zfp128	A	C	7: 12,623,959 (GRCm39)	K109T	possibly damaging	Het

Other mutations in Atxn7l1

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL02130:Atxn7l1	APN	12	33,392,141 (GRCm39)	missense	probably damaging	1.00
IGL02202:Atxn7l1	APN	12	33,392,077 (GRCm39)	missense	probably benign	0.05
IGL02804:Atxn7l1	APN	12	33,417,788 (GRCm39)	missense	probably damaging	1.00
IGL03344:Atxn7l1	APN	12	33,376,065 (GRCm39)	missense	probably damaging	1.00
R0270:Atxn7l1	UTSW	12	33,392,150 (GRCm39)	missense	possibly damaging	0.58
R0621:Atxn7l1	UTSW	12	33,376,099 (GRCm39)	missense	probably benign	0.15
R1840:Atxn7l1	UTSW	12	33,421,032 (GRCm39)	splice site	probably null
R1856:Atxn7l1	UTSW	12	33,408,769 (GRCm39)	missense	probably damaging	1.00
R1992:Atxn7l1	UTSW	12	33,408,743 (GRCm39)	missense	probably damaging	1.00
R1993:Atxn7l1	UTSW	12	33,395,976 (GRCm39)	missense	probably benign
R2249:Atxn7l1	UTSW	12	33,408,839 (GRCm39)	missense	probably damaging	1.00
R2369:Atxn7l1	UTSW	12	33,408,849 (GRCm39)	critical splice donor site	probably null
R3695:Atxn7l1	UTSW	12	33,408,696 (GRCm39)	missense	probably damaging	1.00
R3856:Atxn7l1	UTSW	12	33,417,599 (GRCm39)	missense	probably damaging	1.00
R3976:Atxn7l1	UTSW	12	33,375,954 (GRCm39)	missense	probably damaging	1.00
R4151:Atxn7l1	UTSW	12	33,414,481 (GRCm39)	missense	probably damaging	0.96
R4301:Atxn7l1	UTSW	12	33,417,237 (GRCm39)	missense	probably damaging	1.00
R4305:Atxn7l1	UTSW	12	33,391,991 (GRCm39)	missense	probably damaging	0.99
R4411:Atxn7l1	UTSW	12	33,244,886 (GRCm39)	intron	probably benign
R4763:Atxn7l1	UTSW	12	33,408,877 (GRCm39)	intron	probably benign
R5049:Atxn7l1	UTSW	12	33,408,686 (GRCm39)	missense	probably benign	0.00
R5090:Atxn7l1	UTSW	12	33,376,077 (GRCm39)	missense	probably damaging	1.00
R5134:Atxn7l1	UTSW	12	33,422,875 (GRCm39)	missense	probably damaging	1.00
R5425:Atxn7l1	UTSW	12	33,417,119 (GRCm39)	missense	probably damaging	1.00
R6161:Atxn7l1	UTSW	12	33,408,662 (GRCm39)	missense	possibly damaging	0.62
R6813:Atxn7l1	UTSW	12	33,417,123 (GRCm39)	missense	probably damaging	0.96
R7248:Atxn7l1	UTSW	12	33,417,194 (GRCm39)	missense	probably benign	0.26
R7328:Atxn7l1	UTSW	12	33,198,502 (GRCm39)	critical splice donor site	probably null
R8020:Atxn7l1	UTSW	12	33,375,952 (GRCm39)	missense	probably benign	0.10
R8057:Atxn7l1	UTSW	12	33,376,001 (GRCm39)	missense	probably damaging	0.99
R8353:Atxn7l1	UTSW	12	33,197,882 (GRCm39)	missense	probably damaging	0.99
R8523:Atxn7l1	UTSW	12	33,396,023 (GRCm39)	missense	probably benign
R9051:Atxn7l1	UTSW	12	33,417,420 (GRCm39)	missense	probably benign	0.00
R9350:Atxn7l1	UTSW	12	33,417,315 (GRCm39)	missense	probably benign	0.01
R9789:Atxn7l1	UTSW	12	33,396,062 (GRCm39)	missense	probably damaging	1.00
Z1176:Atxn7l1	UTSW	12	33,418,016 (GRCm39)	missense	probably benign	0.00
Z1176:Atxn7l1	UTSW	12	33,417,644 (GRCm39)	missense	probably benign	0.00

Posted On

2015-04-16