Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL02637:Xkr5'

301574

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Xkr5

Ensembl Gene

ENSMUSG00000039814

Gene Name

X-linked Kx blood group related 5

Synonyms

5430438H03Rik

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

IGL02637

Quality Score

Status

Chromosome

Chromosomal Location

18982745-19000991 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 18984099 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Glutamic Acid to Glycine at position 481 (E481G)

Ref Sequence

ENSEMBL: ENSMUSP00000093089 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000055503] [ENSMUST00000095438] [ENSMUST00000143913] [ENSMUST00000152974]

AlphaFold

Q5GH66

Predicted Effect

probably benign
Transcript: ENSMUST00000055503
AA Change: E315G

PolyPhen 2 Score 0.002 (Sensitivity: 0.99; Specificity: 0.30)

SMART Domains

Protein: ENSMUSP00000061748
Gene: ENSMUSG00000039814
AA Change: E315G

Domain	Start	End	E-Value	Type
Pfam:XK-related	1	155	1.4e-46	PFAM
low complexity region	240	247	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000095438
AA Change: E481G

PolyPhen 2 Score 0.002 (Sensitivity: 0.99; Specificity: 0.30)

SMART Domains

Protein: ENSMUSP00000093089
Gene: ENSMUSG00000039814
AA Change: E481G

Domain	Start	End	E-Value	Type
Pfam:XK-related	5	321	1.6e-87	PFAM
low complexity region	406	413	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000143913

SMART Domains

Protein: ENSMUSP00000121958
Gene: ENSMUSG00000039814

Domain	Start	End	E-Value	Type
Pfam:XK-related	2	109	2.8e-18	PFAM

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000144987

Predicted Effect

probably benign
Transcript: ENSMUST00000152974

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000157795

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 51 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Acsm4	A	G	7: 119,309,907 (GRCm39)	Y435C	probably damaging	Het
Adgrb1	C	T	15: 74,460,143 (GRCm39)		probably benign	Het
Ampd1	T	C	3: 103,002,199 (GRCm39)		probably benign	Het
Camk1g	G	A	1: 193,030,696 (GRCm39)	P338S	probably benign	Het
Cog3	T	C	14: 75,959,636 (GRCm39)		probably benign	Het
Crat	A	G	2: 30,296,401 (GRCm39)	V355A	probably benign	Het
Ctla2a	T	A	13: 61,083,899 (GRCm39)		probably benign	Het
Dnaaf9	C	A	2: 130,656,227 (GRCm39)		probably benign	Het
Efhb	A	G	17: 53,756,580 (GRCm39)	I357T	probably benign	Het
Fh1	T	C	1: 175,437,332 (GRCm39)	M256V	probably benign	Het
Gabrg3	A	G	7: 56,384,775 (GRCm39)	I262T	probably damaging	Het
Gata2	C	T	6: 88,181,558 (GRCm39)		probably benign	Het
Gm6356	A	G	14: 6,970,926 (GRCm38)	V178A	possibly damaging	Het
Hacl1	T	C	14: 31,362,458 (GRCm39)	E63G	probably damaging	Het
Hid1	A	T	11: 115,241,421 (GRCm39)	I623N	probably damaging	Het
Hivep2	A	G	10: 14,006,452 (GRCm39)	K1017E	possibly damaging	Het
Ifi208	C	T	1: 173,506,508 (GRCm39)	T97I	probably benign	Het
Ighg1	T	C	12: 113,293,132 (GRCm39)	H186R	unknown	Het
Igkv8-26	T	C	6: 70,170,642 (GRCm39)	S78P	probably damaging	Het
Itih3	T	C	14: 30,637,617 (GRCm39)	N514S	probably benign	Het
Kcnj16	A	T	11: 110,916,439 (GRCm39)	D367V	probably benign	Het
Klhl23	A	T	2: 69,659,258 (GRCm39)	R428*	probably null	Het
Lgmn	T	C	12: 102,366,485 (GRCm39)	E216G	probably damaging	Het
Lmx1a	G	T	1: 167,672,192 (GRCm39)		probably benign	Het
Lrp5	C	T	19: 3,680,269 (GRCm39)	G405D	probably benign	Het
Lrrc74a	C	T	12: 86,788,521 (GRCm39)	R53*	probably null	Het
Lsm12	G	A	11: 102,054,948 (GRCm39)	R123C	probably benign	Het
Marchf5	T	A	19: 37,198,033 (GRCm39)		probably benign	Het
Mark3	C	A	12: 111,559,090 (GRCm39)	A44D	probably damaging	Het
Mndal	T	A	1: 173,685,003 (GRCm39)	N522I	possibly damaging	Het
Nbeal2	G	T	9: 110,455,045 (GRCm39)	R2611S	possibly damaging	Het
Nlrp4d	T	C	7: 10,116,482 (GRCm39)		noncoding transcript	Het
Npnt	T	A	3: 132,590,271 (GRCm39)	I507F	possibly damaging	Het
Or51a7	G	A	7: 102,622,250 (GRCm39)		probably benign	Het
Pde4a	T	A	9: 21,112,628 (GRCm39)	L91Q	probably damaging	Het
Pdzd2	C	T	15: 12,385,720 (GRCm39)	V1017M	probably benign	Het
Pkhd1l1	A	G	15: 44,427,720 (GRCm39)	N3259S	probably damaging	Het
Plxnb2	A	T	15: 89,048,260 (GRCm39)	H683Q	possibly damaging	Het
Reck	T	A	4: 43,898,009 (GRCm39)	S96T	probably damaging	Het
Rnf135	A	G	11: 80,089,704 (GRCm39)	K347E	probably benign	Het
Ro60	A	G	1: 143,646,526 (GRCm39)	V73A	probably damaging	Het
Rxfp2	A	G	5: 149,979,378 (GRCm39)	D246G	probably damaging	Het
Sdk1	C	T	5: 142,080,327 (GRCm39)	T1273I	probably damaging	Het
Slc12a8	A	T	16: 33,355,330 (GRCm39)	M49L	probably benign	Het
Slc5a11	A	T	7: 122,859,728 (GRCm39)		probably null	Het
Surf2	A	G	2: 26,809,790 (GRCm39)	K247E	probably damaging	Het
Sys1	G	A	2: 164,303,312 (GRCm39)	V9M	possibly damaging	Het
Tcf4	G	A	18: 69,480,421 (GRCm39)	D18N	probably damaging	Het
Tmc6	A	T	11: 117,658,416 (GRCm39)	V773D	possibly damaging	Het
Trappc13	T	C	13: 104,286,570 (GRCm39)	Q229R	probably benign	Het
Xpo5	C	A	17: 46,546,905 (GRCm39)	D885E	probably damaging	Het

Other mutations in Xkr5

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01505:Xkr5	APN	8	18,983,514 (GRCm39)	missense	probably damaging	1.00
IGL02153:Xkr5	APN	8	18,983,683 (GRCm39)	missense	probably benign	0.09
IGL02968:Xkr5	APN	8	18,983,641 (GRCm39)	missense	probably benign	0.13
IGL02983:Xkr5	APN	8	18,983,848 (GRCm39)	missense	probably benign	0.00
IGL03222:Xkr5	APN	8	18,987,315 (GRCm39)	missense	probably damaging	0.98
PIT4431001:Xkr5	UTSW	8	18,984,361 (GRCm39)	missense	possibly damaging	0.67
R0336:Xkr5	UTSW	8	18,990,652 (GRCm39)	missense	possibly damaging	0.93
R0638:Xkr5	UTSW	8	18,983,563 (GRCm39)	missense	probably benign	0.00
R1644:Xkr5	UTSW	8	18,984,141 (GRCm39)	missense	probably benign	0.03
R1703:Xkr5	UTSW	8	18,989,134 (GRCm39)	missense	probably benign	0.15
R1777:Xkr5	UTSW	8	18,989,148 (GRCm39)	missense	probably benign	0.33
R1972:Xkr5	UTSW	8	18,991,997 (GRCm39)	missense	probably damaging	1.00
R3715:Xkr5	UTSW	8	18,984,474 (GRCm39)	missense	probably benign	0.03
R4274:Xkr5	UTSW	8	18,984,183 (GRCm39)	missense	probably benign	0.00
R4603:Xkr5	UTSW	8	18,983,733 (GRCm39)	missense	possibly damaging	0.70
R4742:Xkr5	UTSW	8	18,998,746 (GRCm39)	makesense	probably null
R5019:Xkr5	UTSW	8	18,992,126 (GRCm39)	missense	probably benign	0.00
R5103:Xkr5	UTSW	8	18,983,659 (GRCm39)	missense	probably benign	0.00
R5331:Xkr5	UTSW	8	18,983,484 (GRCm39)	utr 3 prime	probably benign
R5649:Xkr5	UTSW	8	18,983,982 (GRCm39)	missense	probably benign	0.00
R5883:Xkr5	UTSW	8	18,990,806 (GRCm39)	missense	probably damaging	1.00
R6005:Xkr5	UTSW	8	18,984,521 (GRCm39)	missense	probably benign	0.00
R6393:Xkr5	UTSW	8	18,998,716 (GRCm39)	missense	probably damaging	1.00
R6615:Xkr5	UTSW	8	18,983,569 (GRCm39)	missense	probably benign	0.05
R7488:Xkr5	UTSW	8	18,983,608 (GRCm39)	nonsense	probably null
R8011:Xkr5	UTSW	8	18,998,736 (GRCm39)	nonsense	probably null
R8678:Xkr5	UTSW	8	18,984,048 (GRCm39)	missense	probably benign	0.01
R8928:Xkr5	UTSW	8	18,983,787 (GRCm39)	missense	probably benign	0.01
R9572:Xkr5	UTSW	8	18,984,166 (GRCm39)	missense	probably benign	0.41
R9579:Xkr5	UTSW	8	18,983,785 (GRCm39)	missense	probably benign	0.02
R9622:Xkr5	UTSW	8	18,984,247 (GRCm39)	missense	probably benign	0.02
R9762:Xkr5	UTSW	8	18,990,749 (GRCm39)	missense	probably benign	0.00
Z1177:Xkr5	UTSW	8	18,990,801 (GRCm39)	missense	probably damaging	1.00

Posted On

2015-04-16