Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL01929:Gm6686'

180377

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Gm6686

Ensembl Gene

ENSMUSG00000095920

Gene Name

predicted pseudogene 6686

Synonyms

Accession Numbers

Essential gene?

Not available question?

Stock #

IGL01929

Quality Score

Status

Chromosome

Chromosomal Location

15786426-15786683 bp(-) (GRCm39)

Type of Mutation

unclassified

DNA Base Change (assembly)

G to A at 15786577 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Ref Sequence

ENSEMBL: ENSMUSP00000131871 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000147532] [ENSMUST00000167994]

AlphaFold

no structure available at present

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000132675

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000139911

Predicted Effect

probably benign
Transcript: ENSMUST00000147532

SMART Domains

Protein: ENSMUSP00000118454
Gene: ENSMUSG00000051977

Domain	Start	End	E-Value	Type
Pfam:SSXRD	49	81	1.8e-19	PFAM
SET	123	243	2.56e-2	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000167994

SMART Domains

Protein: ENSMUSP00000131871
Gene: ENSMUSG00000051977

Domain	Start	End	E-Value	Type
KRAB	30	89	5.54e-8	SMART
Pfam:SSXRD	175	205	1.5e-20	PFAM
SET	248	368	2.56e-2	SMART
ZnF_C2H2	392	415	3.29e-1	SMART
ZnF_C2H2	516	535	4.74e1	SMART
ZnF_C2H2	541	563	9.73e-4	SMART
ZnF_C2H2	569	591	1.3e-4	SMART
ZnF_C2H2	597	619	1.3e-4	SMART
ZnF_C2H2	625	647	4.24e-4	SMART
ZnF_C2H2	653	675	4.24e-4	SMART
ZnF_C2H2	681	703	1.95e-3	SMART
ZnF_C2H2	709	731	5.99e-4	SMART
ZnF_C2H2	737	759	1.95e-3	SMART
ZnF_C2H2	765	787	1.95e-3	SMART
ZnF_C2H2	793	815	1.3e-4	SMART
ZnF_C2H2	821	843	1.6e-4	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000178455

SMART Domains

Protein: ENSMUSP00000137164
Gene: ENSMUSG00000095920

Domain	Start	End	E-Value	Type
Pfam:Ribosomal_S21	11	50	1.4e-13	PFAM

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 33 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Adam15	G	A	3: 89,251,445 (GRCm39)	P467S	probably benign	Het
Areg	T	C	5: 91,292,312 (GRCm39)	I204T	probably benign	Het
Dnah3	A	T	7: 119,550,874 (GRCm39)	Y3137*	probably null	Het
Dnajc10	T	G	2: 80,158,420 (GRCm39)	C270W	probably damaging	Het
Epc1	A	G	18: 6,449,217 (GRCm39)	F427L	possibly damaging	Het
Fcgbp	A	T	7: 27,803,388 (GRCm39)	D1664V	probably damaging	Het
Gm10718	A	T	9: 3,025,118 (GRCm39)	Y194F	probably benign	Het
Grik4	C	A	9: 42,477,594 (GRCm39)		probably null	Het
H2-Oa	G	A	17: 34,313,056 (GRCm39)		probably null	Het
Iigp1c	A	G	18: 60,379,554 (GRCm39)	E363G	probably benign	Het
Il20ra	T	G	10: 19,635,019 (GRCm39)	L420R	probably benign	Het
Kcnk2	A	G	1: 189,072,227 (GRCm39)	S34P	probably damaging	Het
Klc4	A	G	17: 46,955,173 (GRCm39)		probably null	Het
Large1	T	C	8: 73,585,903 (GRCm39)	Y401C	probably damaging	Het
Lrrc59	T	C	11: 94,534,342 (GRCm39)	V300A	possibly damaging	Het
Myom2	T	A	8: 15,167,698 (GRCm39)	D1094E	probably damaging	Het
Nfrkb	T	A	9: 31,331,169 (GRCm39)	I1230N	possibly damaging	Het
Or55b3	A	G	7: 102,126,373 (GRCm39)	S235P	possibly damaging	Het
Prr14l	T	C	5: 32,985,587 (GRCm39)	T146A	probably benign	Het
Psmd5	A	G	2: 34,753,478 (GRCm39)	V221A	probably damaging	Het
Ptchd4	A	T	17: 42,814,213 (GRCm39)	T705S	probably benign	Het
Ptprm	G	A	17: 66,997,544 (GRCm39)	A1184V	probably damaging	Het
Rb1cc1	G	T	1: 6,310,383 (GRCm39)	K260N	possibly damaging	Het
Rbm28	T	A	6: 29,128,584 (GRCm39)	D46V	possibly damaging	Het
Sdk1	T	C	5: 141,938,785 (GRCm39)	Y403H	probably damaging	Het
Slco3a1	A	G	7: 73,968,353 (GRCm39)		probably benign	Het
Slfn8	T	A	11: 82,894,231 (GRCm39)	K803*	probably null	Het
Vmn2r129	C	T	4: 156,690,549 (GRCm39)		noncoding transcript	Het
Vmn2r130	A	T	17: 23,295,851 (GRCm39)	I674F	possibly damaging	Het
Vmn2r82	A	T	10: 79,214,545 (GRCm39)	D176V	probably damaging	Het
Wdr70	A	T	15: 7,950,115 (GRCm39)		probably null	Het
Xdh	A	T	17: 74,241,850 (GRCm39)	C150S	probably damaging	Het
Xpo5	G	T	17: 46,513,855 (GRCm39)	M3I	probably benign	Het

Other mutations in Gm6686

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL02316:Gm6686	APN	17	15,786,500 (GRCm39)	unclassified	probably benign

Posted On

2014-05-07