Incidental Mutation 'IGL00965:Gm42688'
ID 27692
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Gm42688
Ensembl Gene ENSMUSG00000079511
Gene Name predicted gene 42688
Synonyms
Accession Numbers
Essential gene? Not available question?
Stock # IGL00965
Quality Score
Status
Chromosome 6
Chromosomal Location 83078598-83086920 bp(+) (GRCm39)
Type of Mutation splice site
DNA Base Change (assembly) C to T at 83080373 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000098812 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000101253] [ENSMUST00000101254]
AlphaFold no structure available at present
Predicted Effect probably benign
Transcript: ENSMUST00000101253
SMART Domains Protein: ENSMUSP00000098811
Gene: ENSMUSG00000079511

DomainStartEndE-ValueType
low complexity region 26 44 N/A INTRINSIC
low complexity region 70 91 N/A INTRINSIC
low complexity region 102 118 N/A INTRINSIC
low complexity region 173 187 N/A INTRINSIC
low complexity region 238 263 N/A INTRINSIC
Pfam:CCDC142 286 714 1.6e-159 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000101254
SMART Domains Protein: ENSMUSP00000098812
Gene: ENSMUSG00000107499

DomainStartEndE-ValueType
low complexity region 26 44 N/A INTRINSIC
low complexity region 70 91 N/A INTRINSIC
low complexity region 102 118 N/A INTRINSIC
low complexity region 173 187 N/A INTRINSIC
low complexity region 238 263 N/A INTRINSIC
Pfam:CCDC142 279 714 8.5e-174 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000125657
Predicted Effect noncoding transcript
Transcript: ENSMUST00000134891
Predicted Effect noncoding transcript
Transcript: ENSMUST00000138422
Predicted Effect noncoding transcript
Transcript: ENSMUST00000141639
Predicted Effect noncoding transcript
Transcript: ENSMUST00000154457
Predicted Effect noncoding transcript
Transcript: ENSMUST00000203533
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 30 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Acot8 C T 2: 164,646,735 (GRCm39) M1I probably null Het
Adam33 T C 2: 130,896,183 (GRCm39) probably benign Het
Adgrl1 C T 8: 84,664,332 (GRCm39) T1236I probably damaging Het
Ago4 A G 4: 126,387,107 (GRCm39) V832A probably benign Het
Ankrd26 G T 6: 118,536,319 (GRCm39) Y91* probably null Het
Atp9a C A 2: 168,482,600 (GRCm39) V845L probably benign Het
Cfap100 C T 6: 90,392,787 (GRCm39) E108K probably benign Het
Chrdl2 T A 7: 99,655,860 (GRCm39) probably null Het
Cibar2 T C 8: 120,893,429 (GRCm39) Q254R probably benign Het
Cilk1 A G 9: 78,071,821 (GRCm39) I498V probably benign Het
Erbb4 A T 1: 68,110,789 (GRCm39) L1008* probably null Het
H2-Eb2 T A 17: 34,544,771 (GRCm39) probably null Het
Hmcn2 T C 2: 31,233,108 (GRCm39) V219A probably damaging Het
Hsf2 C T 10: 57,388,196 (GRCm39) P447S probably damaging Het
Hsph1 A T 5: 149,554,269 (GRCm39) I162N probably damaging Het
Il12rb2 T C 6: 67,337,561 (GRCm39) T107A probably damaging Het
Lnx1 T A 5: 74,846,378 (GRCm39) N24I probably benign Het
Mgat3 C A 15: 80,096,634 (GRCm39) A487D probably damaging Het
Or10h5 C T 17: 33,434,947 (GRCm39) V124M probably benign Het
Or52ae9 T A 7: 103,390,172 (GRCm39) I92F probably benign Het
Or6b2 T C 1: 92,407,746 (GRCm39) D199G probably damaging Het
Or6c65 T A 10: 129,603,455 (GRCm39) L30Q probably null Het
Ppargc1b A G 18: 61,456,235 (GRCm39) Y75H probably damaging Het
Rgl2 G T 17: 34,154,910 (GRCm39) C638F probably benign Het
Rhpn1 C A 15: 75,583,735 (GRCm39) R407S probably damaging Het
Sipa1l2 A G 8: 126,174,613 (GRCm39) S1222P probably benign Het
Tango6 T A 8: 107,468,642 (GRCm39) probably benign Het
Tonsl G A 15: 76,516,080 (GRCm39) probably benign Het
Vmn1r77 G A 7: 11,775,223 (GRCm39) probably null Het
Vmn2r13 A C 5: 109,303,964 (GRCm39) F822L probably damaging Het
Other mutations in Gm42688
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01748:Gm42688 APN 6 83,080,001 (GRCm39) missense possibly damaging 0.62
IGL02879:Gm42688 APN 6 83,084,125 (GRCm39) missense probably damaging 1.00
IGL03395:Gm42688 APN 6 83,085,352 (GRCm39) missense possibly damaging 0.88
Posted On 2013-04-17