Incidental Mutation 'IGL02740:Dsg3'
| ID |
305844 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Dsg3
|
| Ensembl Gene |
ENSMUSG00000056632 |
| Gene Name |
desmoglein 3 |
| Synonyms |
|
| Accession Numbers |
|
| Essential gene? |
Possibly non essential
(E-score: 0.427)
|
| Stock # |
IGL02740
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
18 |
| Chromosomal Location |
20643331-20674367 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
C to T
at 20660765 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Threonine to Methionine
at position 368
(T368M)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000064718
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000070892]
|
| AlphaFold |
no structure available at present |
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000070892
AA Change: T368M
PolyPhen 2
Score 0.929 (Sensitivity: 0.81; Specificity: 0.94)
|
| SMART Domains |
Protein: ENSMUSP00000064718
Gene: ENSMUSG00000056632
AA Change: T368M
| Domain | Start | End | E-Value | Type |
|---|
|
signal peptide
|
1 |
23 |
N/A |
INTRINSIC |
|
CA
|
70 |
155 |
3.9e-13 |
SMART |
|
CA
|
179 |
265 |
2.36e-21 |
SMART |
|
CA
|
288 |
382 |
1.55e-7 |
SMART |
|
CA
|
409 |
493 |
6.15e-11 |
SMART |
|
low complexity region
|
615 |
638 |
N/A |
INTRINSIC |
|
low complexity region
|
643 |
657 |
N/A |
INTRINSIC |
|
low complexity region
|
725 |
736 |
N/A |
INTRINSIC |
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: This gene encodes a member of the cadherin family of proteins that forms an integral transmembrane component of desmosomes, the multiprotein complexes involved in cell adhesion, organization of the cytoskeleton, cell sorting and cell signaling. The encoded preproprotein undergoes proteolytic processing to generate a mature, functional protein. Mice lacking the encoded protein exhibit loss of keratinocyte cell adhesion resulting in a phenotype that resembles that of patients with pemphigus vulgaris. This gene is located in a cluster of desmosomal cadherin genes on chromosome 18. [provided by RefSeq, Feb 2016]
PHENOTYPE: Homozygous mutants display runting from decreased food intake due to oropharyngeal epithelial lesions, blisters around snout and eyes, hair loss by weaning, and hair regrowth with bald patches throughout life. [provided by MGI curators]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 61 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Als2 |
C |
T |
1: 59,209,078 (GRCm39) |
E1494K |
probably benign |
Het |
| Antxr2 |
A |
G |
5: 98,178,251 (GRCm39) |
|
probably benign |
Het |
| Arhgap23 |
A |
C |
11: 97,365,843 (GRCm39) |
K998Q |
probably damaging |
Het |
| Bap1 |
A |
G |
14: 30,978,729 (GRCm39) |
N47D |
possibly damaging |
Het |
| Carmil1 |
A |
G |
13: 24,278,501 (GRCm39) |
I156T |
probably damaging |
Het |
| Ccdc141 |
T |
C |
2: 76,884,953 (GRCm39) |
T563A |
probably benign |
Het |
| Cct7 |
T |
C |
6: 85,445,252 (GRCm39) |
F501S |
probably benign |
Het |
| Cd59b |
A |
G |
2: 103,909,242 (GRCm39) |
I8V |
probably benign |
Het |
| Cep135 |
T |
C |
5: 76,786,115 (GRCm39) |
|
probably null |
Het |
| Cep170 |
T |
G |
1: 176,621,166 (GRCm39) |
T4P |
probably damaging |
Het |
| Chaf1a |
G |
T |
17: 56,374,500 (GRCm39) |
G896W |
probably damaging |
Het |
| Cpt1b |
A |
T |
15: 89,308,535 (GRCm39) |
L131Q |
probably damaging |
Het |
| Dcaf13 |
C |
T |
15: 39,008,495 (GRCm39) |
R366* |
probably null |
Het |
| Ddr2 |
A |
T |
1: 169,812,514 (GRCm39) |
N659K |
probably damaging |
Het |
| Dmrt2 |
C |
A |
19: 25,655,837 (GRCm39) |
L479I |
possibly damaging |
Het |
| Dnah10 |
A |
G |
5: 124,903,927 (GRCm39) |
|
probably benign |
Het |
| Dspp |
C |
A |
5: 104,325,104 (GRCm39) |
S489* |
probably null |
Het |
| Eed |
A |
C |
7: 89,621,464 (GRCm39) |
V112G |
possibly damaging |
Het |
| Ehmt1 |
T |
A |
2: 24,705,851 (GRCm39) |
|
probably benign |
Het |
| Elavl3 |
T |
C |
9: 21,947,675 (GRCm39) |
D89G |
probably benign |
Het |
| Ercc5 |
T |
C |
1: 44,206,652 (GRCm39) |
S522P |
probably benign |
Het |
| Esrrg |
T |
C |
1: 187,930,938 (GRCm39) |
L320P |
probably benign |
Het |
| Gadl1 |
T |
A |
9: 115,835,629 (GRCm39) |
Y352* |
probably null |
Het |
| Gemin5 |
G |
A |
11: 58,042,390 (GRCm39) |
A477V |
probably damaging |
Het |
| Gm3086 |
A |
T |
12: 70,016,095 (GRCm39) |
|
probably benign |
Het |
| Gm8082 |
C |
T |
14: 42,846,570 (GRCm39) |
|
probably benign |
Het |
| Gpr180 |
T |
C |
14: 118,377,161 (GRCm39) |
L54P |
probably damaging |
Het |
| Gpsm1 |
G |
A |
2: 26,230,585 (GRCm39) |
V512M |
probably benign |
Het |
| Ighv5-4 |
A |
G |
12: 113,561,100 (GRCm39) |
S107P |
probably damaging |
Het |
| Irak4 |
T |
C |
15: 94,464,925 (GRCm39) |
*460Q |
probably null |
Het |
| Nfkbiz |
G |
T |
16: 55,638,317 (GRCm39) |
T381N |
probably benign |
Het |
| Or1e25 |
A |
T |
11: 73,493,657 (GRCm39) |
N84Y |
probably benign |
Het |
| Or5d39 |
T |
A |
2: 87,979,601 (GRCm39) |
H254L |
probably damaging |
Het |
| Or8b46 |
T |
C |
9: 38,450,226 (GRCm39) |
F12L |
probably damaging |
Het |
| Or8g23 |
T |
C |
9: 38,971,585 (GRCm39) |
I126V |
probably benign |
Het |
| Pou2f1 |
G |
A |
1: 165,710,685 (GRCm39) |
Q523* |
probably null |
Het |
| Ptcra |
A |
G |
17: 47,069,473 (GRCm39) |
S133P |
probably damaging |
Het |
| Ptgfrn |
A |
T |
3: 100,980,253 (GRCm39) |
D362E |
possibly damaging |
Het |
| Rbm33 |
A |
T |
5: 28,536,121 (GRCm39) |
D19V |
probably damaging |
Het |
| Rnf4 |
T |
A |
5: 34,506,898 (GRCm39) |
V74D |
possibly damaging |
Het |
| Rprd1b |
A |
G |
2: 157,889,899 (GRCm39) |
D7G |
probably damaging |
Het |
| Rrp1b |
A |
G |
17: 32,278,305 (GRCm39) |
T659A |
probably damaging |
Het |
| Scaf11 |
T |
C |
15: 96,316,883 (GRCm39) |
N894D |
probably benign |
Het |
| Scn1a |
G |
A |
2: 66,155,106 (GRCm39) |
R618C |
probably damaging |
Het |
| Scn1a |
A |
T |
2: 66,148,421 (GRCm39) |
D1041E |
probably benign |
Het |
| Slc43a1 |
G |
T |
2: 84,690,094 (GRCm39) |
A424S |
probably damaging |
Het |
| Sprtn |
T |
C |
8: 125,625,042 (GRCm39) |
L49P |
probably damaging |
Het |
| Sv2a |
G |
T |
3: 96,092,723 (GRCm39) |
R141L |
possibly damaging |
Het |
| Thsd7b |
C |
T |
1: 129,540,864 (GRCm39) |
S246F |
probably damaging |
Het |
| Tmem117 |
A |
T |
15: 94,612,863 (GRCm39) |
D133V |
probably benign |
Het |
| Tnn |
A |
T |
1: 159,968,347 (GRCm39) |
|
probably benign |
Het |
| Triobp |
G |
A |
15: 78,850,889 (GRCm39) |
V348I |
probably benign |
Het |
| Trps1 |
A |
T |
15: 50,709,935 (GRCm39) |
D134E |
probably damaging |
Het |
| Ttn |
T |
C |
2: 76,598,162 (GRCm39) |
I19584V |
probably benign |
Het |
| Uqcrfs1 |
T |
C |
13: 30,725,006 (GRCm39) |
H178R |
probably damaging |
Het |
| Ush2a |
A |
T |
1: 188,380,585 (GRCm39) |
Q2298L |
possibly damaging |
Het |
| Vmn2r67 |
A |
G |
7: 84,785,818 (GRCm39) |
I729T |
probably damaging |
Het |
| Vmn2r79 |
A |
T |
7: 86,653,366 (GRCm39) |
M544L |
probably benign |
Het |
| Vps41 |
T |
A |
13: 19,022,850 (GRCm39) |
L404Q |
probably damaging |
Het |
| Xrcc5 |
T |
G |
1: 72,379,240 (GRCm39) |
|
probably null |
Het |
| Zfp735 |
A |
G |
11: 73,601,412 (GRCm39) |
K119E |
possibly damaging |
Het |
|
| Other mutations in Dsg3 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00587:Dsg3
|
APN |
18 |
20,672,711 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL00697:Dsg3
|
APN |
18 |
20,657,746 (GRCm39) |
critical splice donor site |
probably null |
|
|
IGL00966:Dsg3
|
APN |
18 |
20,656,664 (GRCm39) |
missense |
probably benign |
0.02 |
|
IGL01352:Dsg3
|
APN |
18 |
20,656,753 (GRCm39) |
missense |
probably benign |
0.25 |
|
IGL01953:Dsg3
|
APN |
18 |
20,658,361 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02385:Dsg3
|
APN |
18 |
20,660,771 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02622:Dsg3
|
APN |
18 |
20,662,004 (GRCm39) |
splice site |
probably benign |
|
|
IGL02643:Dsg3
|
APN |
18 |
20,662,012 (GRCm39) |
missense |
probably benign |
0.00 |
|
IGL03012:Dsg3
|
APN |
18 |
20,670,300 (GRCm39) |
critical splice acceptor site |
probably null |
|
|
IGL03026:Dsg3
|
APN |
18 |
20,670,029 (GRCm39) |
splice site |
probably null |
|
|
IGL03063:Dsg3
|
APN |
18 |
20,666,425 (GRCm39) |
splice site |
probably benign |
|
|
IGL03098:Dsg3
|
APN |
18 |
20,643,422 (GRCm39) |
utr 5 prime |
probably benign |
|
|
IGL03132:Dsg3
|
APN |
18 |
20,657,653 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL03352:Dsg3
|
APN |
18 |
20,660,689 (GRCm39) |
missense |
probably benign |
|
|
P0035:Dsg3
|
UTSW |
18 |
20,673,026 (GRCm39) |
missense |
probably benign |
0.05 |
|
R0039:Dsg3
|
UTSW |
18 |
20,654,541 (GRCm39) |
missense |
probably benign |
0.36 |
|
R0099:Dsg3
|
UTSW |
18 |
20,673,079 (GRCm39) |
missense |
probably benign |
0.01 |
|
R0109:Dsg3
|
UTSW |
18 |
20,673,191 (GRCm39) |
missense |
probably damaging |
0.96 |
|
R0109:Dsg3
|
UTSW |
18 |
20,673,191 (GRCm39) |
missense |
probably damaging |
0.96 |
|
R0143:Dsg3
|
UTSW |
18 |
20,669,882 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0194:Dsg3
|
UTSW |
18 |
20,673,199 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0373:Dsg3
|
UTSW |
18 |
20,672,804 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0517:Dsg3
|
UTSW |
18 |
20,662,082 (GRCm39) |
missense |
probably benign |
0.06 |
|
R0521:Dsg3
|
UTSW |
18 |
20,660,872 (GRCm39) |
missense |
possibly damaging |
0.53 |
|
R1194:Dsg3
|
UTSW |
18 |
20,658,277 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R1551:Dsg3
|
UTSW |
18 |
20,669,975 (GRCm39) |
missense |
possibly damaging |
0.84 |
|
R1762:Dsg3
|
UTSW |
18 |
20,672,789 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1957:Dsg3
|
UTSW |
18 |
20,655,162 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2061:Dsg3
|
UTSW |
18 |
20,660,794 (GRCm39) |
nonsense |
probably null |
|
|
R2071:Dsg3
|
UTSW |
18 |
20,669,882 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2513:Dsg3
|
UTSW |
18 |
20,656,719 (GRCm39) |
missense |
possibly damaging |
0.48 |
|
R2571:Dsg3
|
UTSW |
18 |
20,673,062 (GRCm39) |
missense |
probably benign |
0.01 |
|
R2945:Dsg3
|
UTSW |
18 |
20,672,992 (GRCm39) |
missense |
probably benign |
|
|
R2968:Dsg3
|
UTSW |
18 |
20,658,282 (GRCm39) |
missense |
possibly damaging |
0.75 |
|
R3906:Dsg3
|
UTSW |
18 |
20,671,556 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4616:Dsg3
|
UTSW |
18 |
20,664,616 (GRCm39) |
missense |
probably benign |
|
|
R4641:Dsg3
|
UTSW |
18 |
20,653,615 (GRCm39) |
missense |
probably benign |
0.28 |
|
R4685:Dsg3
|
UTSW |
18 |
20,672,793 (GRCm39) |
missense |
probably benign |
0.08 |
|
R5690:Dsg3
|
UTSW |
18 |
20,655,108 (GRCm39) |
missense |
probably benign |
0.01 |
|
R5786:Dsg3
|
UTSW |
18 |
20,654,628 (GRCm39) |
missense |
possibly damaging |
0.46 |
|
R5950:Dsg3
|
UTSW |
18 |
20,671,586 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6131:Dsg3
|
UTSW |
18 |
20,653,534 (GRCm39) |
splice site |
probably null |
|
|
R6131:Dsg3
|
UTSW |
18 |
20,671,569 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R6243:Dsg3
|
UTSW |
18 |
20,672,781 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6315:Dsg3
|
UTSW |
18 |
20,657,643 (GRCm39) |
missense |
probably benign |
0.08 |
|
R6327:Dsg3
|
UTSW |
18 |
20,672,927 (GRCm39) |
missense |
probably benign |
|
|
R6418:Dsg3
|
UTSW |
18 |
20,656,817 (GRCm39) |
critical splice donor site |
probably null |
|
|
R6464:Dsg3
|
UTSW |
18 |
20,666,583 (GRCm39) |
missense |
probably benign |
0.00 |
|
R6497:Dsg3
|
UTSW |
18 |
20,670,305 (GRCm39) |
missense |
probably benign |
0.33 |
|
R6518:Dsg3
|
UTSW |
18 |
20,666,479 (GRCm39) |
missense |
probably benign |
0.23 |
|
R6551:Dsg3
|
UTSW |
18 |
20,672,968 (GRCm39) |
missense |
unknown |
|
|
R6685:Dsg3
|
UTSW |
18 |
20,653,672 (GRCm39) |
critical splice donor site |
probably null |
|
|
R6952:Dsg3
|
UTSW |
18 |
20,658,216 (GRCm39) |
missense |
possibly damaging |
0.77 |
|
R7357:Dsg3
|
UTSW |
18 |
20,672,840 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7385:Dsg3
|
UTSW |
18 |
20,673,254 (GRCm39) |
missense |
possibly damaging |
0.52 |
|
R7456:Dsg3
|
UTSW |
18 |
20,664,420 (GRCm39) |
missense |
probably benign |
0.17 |
|
R7506:Dsg3
|
UTSW |
18 |
20,666,521 (GRCm39) |
missense |
probably benign |
0.31 |
|
R7570:Dsg3
|
UTSW |
18 |
20,660,837 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
R7980:Dsg3
|
UTSW |
18 |
20,664,417 (GRCm39) |
missense |
probably benign |
0.00 |
|
R8100:Dsg3
|
UTSW |
18 |
20,662,028 (GRCm39) |
missense |
probably benign |
0.08 |
|
R8147:Dsg3
|
UTSW |
18 |
20,673,130 (GRCm39) |
missense |
probably benign |
|
|
R8242:Dsg3
|
UTSW |
18 |
20,669,980 (GRCm39) |
missense |
possibly damaging |
0.93 |
|
R8415:Dsg3
|
UTSW |
18 |
20,656,765 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8494:Dsg3
|
UTSW |
18 |
20,673,271 (GRCm39) |
missense |
probably benign |
0.03 |
|
R8930:Dsg3
|
UTSW |
18 |
20,672,718 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8932:Dsg3
|
UTSW |
18 |
20,672,718 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8998:Dsg3
|
UTSW |
18 |
20,666,684 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8999:Dsg3
|
UTSW |
18 |
20,666,684 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9336:Dsg3
|
UTSW |
18 |
20,657,742 (GRCm39) |
missense |
probably benign |
0.19 |
|
R9498:Dsg3
|
UTSW |
18 |
20,658,278 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R9598:Dsg3
|
UTSW |
18 |
20,672,789 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9601:Dsg3
|
UTSW |
18 |
20,666,578 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9748:Dsg3
|
UTSW |
18 |
20,672,761 (GRCm39) |
missense |
possibly damaging |
0.87 |
|
R9794:Dsg3
|
UTSW |
18 |
20,673,154 (GRCm39) |
missense |
probably benign |
0.00 |
|
| Posted On |
2015-04-16 |
Incidental Mutation