Mutagenetix > Incidental Mutation

Incidental Mutation 'R4200:Ttc24'

318714

Institutional Source

Beutler Lab

Gene Symbol

Ttc24

Ensembl Gene

ENSMUSG00000051036

Gene Name

tetratricopeptide repeat domain 24

Synonyms

A430025D11Rik

MMRRC Submission

041030-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.050) question?

Stock #

R4200 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

87976717-87985611 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 87981824 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Threonine to Alanine at position 81 (T81A)

Ref Sequence

ENSEMBL: ENSMUSP00000061571 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000050258] [ENSMUST00000064550]

AlphaFold

Q8BYG0

Predicted Effect

probably benign
Transcript: ENSMUST00000050258
AA Change: T81A

PolyPhen 2 Score 0.006 (Sensitivity: 0.97; Specificity: 0.75)

SMART Domains

Protein: ENSMUSP00000061571
Gene: ENSMUSG00000051036
AA Change: T81A

Domain	Start	End	E-Value	Type
TPR	35	68	3.5e0	SMART
TPR	72	105	4.09e-1	SMART
TPR	112	145	3.41e1	SMART
TPR	152	185	6.95e-4	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000064550

Meta Mutation Damage Score

0.0898

Coding Region Coverage

1x: 99.2%
3x: 98.6%
10x: 97.2%
20x: 95.2%

Validation Efficiency

100% (40/40)

Allele List at MGI

Other mutations in this stock

Total: 34 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Aadac	T	A	3: 59,946,955 (GRCm39)	Y218N	probably damaging	Het
Aox3	A	G	1: 58,227,537 (GRCm39)	E1214G	probably damaging	Het
Arhgap31	G	A	16: 38,444,275 (GRCm39)	A194V	probably damaging	Het
Asxl1	C	A	2: 153,242,026 (GRCm39)	L859I	possibly damaging	Het
C7	A	G	15: 5,019,791 (GRCm39)		probably null	Het
Col6a3	C	A	1: 90,729,105 (GRCm39)	V1279L	probably benign	Het
Dnah3	C	T	7: 119,522,061 (GRCm39)	G4033D	probably damaging	Het
Etl4	C	A	2: 20,786,694 (GRCm39)	H481Q	probably damaging	Het
Foxg1	T	A	12: 49,432,082 (GRCm39)	S272T	possibly damaging	Het
Gm3336	A	T	8: 71,173,261 (GRCm39)	D91V	probably benign	Het
Hnf4g	T	G	3: 3,716,344 (GRCm39)	V256G	possibly damaging	Het
Hyou1	G	A	9: 44,300,156 (GRCm39)	R815H	probably damaging	Het
Ifi203	A	C	1: 173,751,681 (GRCm39)	I380S	probably damaging	Het
Map2	C	T	1: 66,464,457 (GRCm39)	R128C	probably damaging	Het
Mboat7	C	A	7: 3,688,752 (GRCm39)	A259S	possibly damaging	Het
Mroh8	C	T	2: 157,083,730 (GRCm39)	V381M	probably benign	Het
Muc5b	T	A	7: 141,412,662 (GRCm39)	C1869*	probably null	Het
Nfatc4	C	T	14: 56,069,489 (GRCm39)	R672W	probably damaging	Het
Nup210l	T	C	3: 90,027,218 (GRCm39)	I200T	probably damaging	Het
Olr1	A	G	6: 129,479,068 (GRCm39)	V50A	probably damaging	Het
Or1i2	A	T	10: 78,447,901 (GRCm39)	D191E	possibly damaging	Het
Or51h7	A	G	7: 102,591,004 (GRCm39)	F260S	probably damaging	Het
Pcdhgb5	A	G	18: 37,865,035 (GRCm39)	I277V	possibly damaging	Het
Pknox1	C	A	17: 31,818,584 (GRCm39)	N272K	probably benign	Het
Psg23	T	C	7: 18,345,990 (GRCm39)	D235G	probably damaging	Het
Slc1a1	A	G	19: 28,878,852 (GRCm39)	K197R	probably benign	Het
Tgm2	C	A	2: 157,974,410 (GRCm39)	R207L	probably benign	Het
Trim29	G	T	9: 43,222,677 (GRCm39)	E169*	probably null	Het
Ttll1	A	T	15: 83,376,778 (GRCm39)	I315N	probably damaging	Het
Ttll12	T	C	15: 83,461,214 (GRCm39)	N602D	probably damaging	Het
Vmn1r18	A	T	6: 57,367,101 (GRCm39)	V151E	probably benign	Het
Vmn2r100	T	A	17: 19,742,797 (GRCm39)	D390E	probably benign	Het
Zfp26	T	C	9: 20,348,012 (GRCm39)	T851A	probably benign	Het
Zfp58	T	G	13: 67,639,440 (GRCm39)	R350S	probably benign	Het

Other mutations in Ttc24

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01896:Ttc24	APN	3	87,977,720 (GRCm39)	critical splice acceptor site	probably null
IGL03069:Ttc24	APN	3	87,977,408 (GRCm39)	missense	probably benign	0.07
R0153:Ttc24	UTSW	3	87,982,234 (GRCm39)	unclassified	probably benign
R1626:Ttc24	UTSW	3	87,977,366 (GRCm39)	missense	probably benign	0.00
R1735:Ttc24	UTSW	3	87,980,401 (GRCm39)	splice site	probably null
R1938:Ttc24	UTSW	3	87,982,181 (GRCm39)	missense	probably benign	0.28
R4112:Ttc24	UTSW	3	87,981,946 (GRCm39)	missense	probably damaging	0.99
R7600:Ttc24	UTSW	3	87,979,320 (GRCm39)	start codon destroyed	probably null
R7939:Ttc24	UTSW	3	87,981,945 (GRCm39)	missense	possibly damaging	0.83
R8432:Ttc24	UTSW	3	87,977,366 (GRCm39)	missense	probably benign	0.15
R8519:Ttc24	UTSW	3	87,980,369 (GRCm39)	missense	probably damaging	1.00
R8784:Ttc24	UTSW	3	87,980,033 (GRCm39)	nonsense	probably null
R9164:Ttc24	UTSW	3	87,980,295 (GRCm39)	nonsense	probably null
R9370:Ttc24	UTSW	3	87,980,136 (GRCm39)	missense	probably benign	0.20
R9531:Ttc24	UTSW	3	87,978,416 (GRCm39)	missense	possibly damaging	0.79
Z1176:Ttc24	UTSW	3	87,979,293 (GRCm39)	missense	probably benign	0.06
Z1176:Ttc24	UTSW	3	87,978,365 (GRCm39)	frame shift	probably null

Predicted Primers

PCR Primer
(F):5'- CCACCCCGTTCATTGGAAAC -3'
(R):5'- ATCTGGCCATCAGTGACTTTGG -3'

Sequencing Primer
(F):5'- TATGTAACCCAAGCTGGCCTG -3'
(R):5'- CAGTGACTTTGGTTCTATTCTCCAGG -3'

Posted On

2015-06-10