Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL02928:Mrps7'

363956

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Mrps7

Ensembl Gene

ENSMUSG00000046756

Gene Name

mitchondrial ribosomal protein S7

Synonyms

MRP-S7, Rpms7

Accession Numbers

Essential gene?

Probably essential (E-score: 0.962) question?

Stock #

IGL02928

Quality Score

Status

Chromosome

Chromosomal Location

115494966-115498862 bp(+) (GRCm39)

Type of Mutation

nonsense

DNA Base Change (assembly)

C to T at 115495910 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Glutamine to Stop codon at position 113 (Q113*)

Ref Sequence

ENSEMBL: ENSMUSP00000053033 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000019135] [ENSMUST00000021087] [ENSMUST00000058109] [ENSMUST00000106506] [ENSMUST00000106507] [ENSMUST00000106508] [ENSMUST00000148574] [ENSMUST00000156173] [ENSMUST00000125097]

AlphaFold

Q80X85

Predicted Effect

probably benign
Transcript: ENSMUST00000019135

SMART Domains

Protein: ENSMUSP00000019135
Gene: ENSMUSG00000020740

Domain	Start	End	E-Value	Type
VHS	9	142	9.36e-55	SMART
low complexity region	174	185	N/A	INTRINSIC
Pfam:GAT	222	299	1.7e-20	PFAM
low complexity region	334	369	N/A	INTRINSIC
low complexity region	383	395	N/A	INTRINSIC
low complexity region	455	471	N/A	INTRINSIC
low complexity region	483	498	N/A	INTRINSIC
low complexity region	532	554	N/A	INTRINSIC
Alpha_adaptinC2	586	710	6.09e-43	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000021087

SMART Domains

Protein: ENSMUSP00000021087
Gene: ENSMUSG00000020743

Domain	Start	End	E-Value	Type
Pfam:MIF4G	4	205	1.4e-14	PFAM

Predicted Effect

probably null
Transcript: ENSMUST00000058109
AA Change: Q113*

SMART Domains

Protein: ENSMUSP00000053033
Gene: ENSMUSG00000046756
AA Change: Q113*

Domain	Start	End	E-Value	Type
signal peptide	1	18	N/A	INTRINSIC
Pfam:Ribosomal_S7	68	234	7.1e-40	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000106506

SMART Domains

Protein: ENSMUSP00000102115
Gene: ENSMUSG00000020743

Domain	Start	End	E-Value	Type
Pfam:MIF4G	4	186	1.1e-9	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000106507

SMART Domains

Protein: ENSMUSP00000102116
Gene: ENSMUSG00000020743

Domain	Start	End	E-Value	Type
Pfam:MIF4G	4	204	3.5e-15	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000106508

SMART Domains

Protein: ENSMUSP00000102117
Gene: ENSMUSG00000020740

Domain	Start	End	E-Value	Type
VHS	9	142	9.36e-55	SMART
low complexity region	174	185	N/A	INTRINSIC
Pfam:GAT	206	307	1.3e-32	PFAM
low complexity region	377	393	N/A	INTRINSIC
low complexity region	405	420	N/A	INTRINSIC
low complexity region	454	476	N/A	INTRINSIC
Alpha_adaptinC2	508	632	6.09e-43	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000123831

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000141556

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000137304

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000124407

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000158851

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000148782

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000149814

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000128437

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000142637

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000132503

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000127132

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000146244

Predicted Effect

probably benign
Transcript: ENSMUST00000148574

SMART Domains

Protein: ENSMUSP00000119643
Gene: ENSMUSG00000020743

Domain	Start	End	E-Value	Type
Pfam:MIF4G	4	162	1.3e-7	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000156173

SMART Domains

Protein: ENSMUSP00000138597
Gene: ENSMUSG00000020740

Domain	Start	End	E-Value	Type
VHS	9	142	9.36e-55	SMART
low complexity region	174	185	N/A	INTRINSIC
Pfam:GAT	206	307	7.3e-32	PFAM
low complexity region	334	369	N/A	INTRINSIC
low complexity region	383	395	N/A	INTRINSIC
low complexity region	455	471	N/A	INTRINSIC
low complexity region	483	498	N/A	INTRINSIC
low complexity region	532	554	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000125097

SMART Domains

Protein: ENSMUSP00000118024
Gene: ENSMUSG00000020740

Domain	Start	End	E-Value	Type
Pfam:VHS	3	106	3.4e-41	PFAM

Coding Region Coverage

Validation Efficiency

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] Mammalian mitochondrial ribosomal proteins are encoded by nuclear genes and help in protein synthesis within the mitochondrion. Mitochondrial ribosomes (mitoribosomes) consist of a small 28S subunit and a large 39S subunit. They have an estimated 75% protein to rRNA composition compared to prokaryotic ribosomes, where this ratio is reversed. Another difference between mammalian mitoribosomes and prokaryotic ribosomes is that the latter contain a 5S rRNA. Among different species, the proteins comprising the mitoribosome differ greatly in sequence, and sometimes in biochemical properties, which prevents easy recognition by sequence homology. This gene encodes a 28S subunit protein. In the prokaryotic ribosome, the comparable protein is thought to play an essential role in organizing the 3' domain of the 16 S rRNA in the vicinity of the P- and A-sites. Pseudogenes corresponding to this gene are found on chromosomes 8p and 12p. [provided by RefSeq, Jul 2008]

Allele List at MGI

Other mutations in this stock

Total: 47 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1700018F24Rik	A	G	5: 144,980,327 (GRCm39)	Y92C	probably damaging	Het
Aadacl4fm1	A	T	4: 144,255,802 (GRCm39)	L407F	possibly damaging	Het
Abcc3	G	T	11: 94,252,132 (GRCm39)	T817K	possibly damaging	Het
Arhgap10	G	A	8: 77,977,539 (GRCm39)		probably benign	Het
Arhgef16	G	T	4: 154,367,350 (GRCm39)	Q352K	probably benign	Het
Cep104	A	G	4: 154,065,716 (GRCm39)	I68V	probably benign	Het
Col5a2	G	A	1: 45,424,180 (GRCm39)	A1082V	probably benign	Het
Col6a1	A	T	10: 76,545,500 (GRCm39)	Y991N	possibly damaging	Het
Ehmt2	T	C	17: 35,129,798 (GRCm39)	I1021T	probably damaging	Het
Eif2ak4	G	A	2: 118,303,168 (GRCm39)		probably null	Het
Ern1	A	G	11: 106,296,705 (GRCm39)		probably benign	Het
Fgf18	A	T	11: 33,074,674 (GRCm39)	I99N	possibly damaging	Het
Glp1r	A	G	17: 31,137,911 (GRCm39)	D114G	probably benign	Het
Gm10553	A	G	1: 85,077,933 (GRCm39)	K17E	possibly damaging	Het
Gm5422	T	A	10: 31,126,250 (GRCm39)		noncoding transcript	Het
Gnb1	A	C	4: 155,637,863 (GRCm39)	T196P	probably benign	Het
Ighv6-5	T	A	12: 114,380,412 (GRCm39)	D35V	probably benign	Het
Il18r1	G	A	1: 40,517,711 (GRCm39)		probably null	Het
Ipo11	A	T	13: 107,025,863 (GRCm39)		probably benign	Het
Itih1	T	A	14: 30,659,715 (GRCm39)	Q307L	probably damaging	Het
Mmp1b	T	A	9: 7,368,242 (GRCm39)	*464L	probably null	Het
Npat	A	C	9: 53,478,138 (GRCm39)		probably benign	Het
Nrp2	A	G	1: 62,854,605 (GRCm39)	I852V	probably damaging	Het
Or10ak14	A	G	4: 118,611,697 (GRCm39)	F15L	probably damaging	Het
Or5ae2	A	G	7: 84,506,273 (GRCm39)	E232G	probably benign	Het
P2rx6	T	A	16: 17,382,901 (GRCm39)		probably benign	Het
Parp6	T	A	9: 59,548,346 (GRCm39)	N466K	possibly damaging	Het
Prss12	A	T	3: 123,280,805 (GRCm39)	N497Y	possibly damaging	Het
Psg22	T	C	7: 18,453,458 (GRCm39)	V51A	probably damaging	Het
Ptgir	T	C	7: 16,642,923 (GRCm39)	S175P	possibly damaging	Het
Rd3l	T	C	12: 111,946,012 (GRCm39)	S156G	probably benign	Het
Reck	C	T	4: 43,912,078 (GRCm39)	H196Y	possibly damaging	Het
Rft1	T	A	14: 30,385,072 (GRCm39)	V165D	possibly damaging	Het
Rin2	A	G	2: 145,701,926 (GRCm39)		probably benign	Het
Rufy4	A	G	1: 74,168,241 (GRCm39)		probably benign	Het
Scfd2	G	A	5: 74,691,832 (GRCm39)	T150M	probably damaging	Het
Sgca	A	G	11: 94,863,129 (GRCm39)	W75R	probably damaging	Het
Sirt7	A	T	11: 120,511,042 (GRCm39)	D318E	probably benign	Het
Smr2l	A	T	5: 88,424,976 (GRCm39)	I14L	probably benign	Het
Snta1	C	T	2: 154,222,959 (GRCm39)	A255T	probably benign	Het
Stxbp2	A	G	8: 3,691,736 (GRCm39)	D485G	probably damaging	Het
Sycp1	T	A	3: 102,726,134 (GRCm39)		probably benign	Het
Tenm2	A	G	11: 35,917,997 (GRCm39)	V1922A	possibly damaging	Het
Ttc7b	A	T	12: 100,369,674 (GRCm39)	V365D	probably damaging	Het
Upk3b	A	G	5: 136,067,995 (GRCm39)	E62G	probably benign	Het
Wdr36	T	C	18: 32,980,372 (GRCm39)		probably null	Het
Yars2	T	C	16: 16,121,410 (GRCm39)	F188S	probably damaging	Het

Other mutations in Mrps7

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00487:Mrps7	APN	11	115,495,684 (GRCm39)	missense	possibly damaging	0.78
R1494:Mrps7	UTSW	11	115,494,952 (GRCm39)	unclassified	probably benign
R1501:Mrps7	UTSW	11	115,495,023 (GRCm39)	missense	probably benign	0.00
R1651:Mrps7	UTSW	11	115,495,581 (GRCm39)	nonsense	probably null
R1830:Mrps7	UTSW	11	115,497,811 (GRCm39)	missense	probably benign	0.01
R2895:Mrps7	UTSW	11	115,495,865 (GRCm39)	missense	probably benign	0.01
R5155:Mrps7	UTSW	11	115,495,655 (GRCm39)	nonsense	probably null
R6076:Mrps7	UTSW	11	115,495,713 (GRCm39)	missense	probably damaging	0.99
R6144:Mrps7	UTSW	11	115,495,000 (GRCm39)	missense	probably benign	0.43
R6180:Mrps7	UTSW	11	115,495,707 (GRCm39)	missense	possibly damaging	0.95
R7421:Mrps7	UTSW	11	115,495,717 (GRCm39)	missense	probably benign	0.22
R7541:Mrps7	UTSW	11	115,497,696 (GRCm39)	missense	probably damaging	0.97
R7697:Mrps7	UTSW	11	115,495,701 (GRCm39)	missense	probably benign	0.00
R7981:Mrps7	UTSW	11	115,497,687 (GRCm39)	missense	possibly damaging	0.52

Posted On

2015-12-18