Incidental Mutation 'IGL00492:Vmn1r86'
ID |
6313 |
Institutional Source |
Australian Phenomics Network
(link to record)
|
Gene Symbol |
Vmn1r86
|
Ensembl Gene |
ENSMUSG00000070816 |
Gene Name |
vomeronasal 1 receptor 86 |
Synonyms |
Gm10301 |
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.050)
|
Stock # |
IGL00492
|
Quality Score |
|
Status
|
|
Chromosome |
7 |
Chromosomal Location |
12835924-12836874 bp(-) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
C to T
at 12836468 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Cysteine to Tyrosine
at position 86
(C86Y)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000154464
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000094828]
[ENSMUST00000226604]
[ENSMUST00000227220]
[ENSMUST00000227700]
|
AlphaFold |
L7N213 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000094828
AA Change: C136Y
PolyPhen 2
Score 0.046 (Sensitivity: 0.94; Specificity: 0.83)
|
SMART Domains |
Protein: ENSMUSP00000092423 Gene: ENSMUSG00000070816 AA Change: C136Y
Domain | Start | End | E-Value | Type |
Pfam:TAS2R
|
1 |
306 |
1.1e-14 |
PFAM |
Pfam:V1R
|
35 |
301 |
4e-31 |
PFAM |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000210729
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000226604
AA Change: C136Y
PolyPhen 2
Score 0.046 (Sensitivity: 0.94; Specificity: 0.83)
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000227220
AA Change: C136Y
PolyPhen 2
Score 0.046 (Sensitivity: 0.94; Specificity: 0.83)
|
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000227700
AA Change: C86Y
PolyPhen 2
Score 0.906 (Sensitivity: 0.82; Specificity: 0.94)
|
Coding Region Coverage |
|
Validation Efficiency |
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 30 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Arhgap29 |
G |
T |
3: 121,796,961 (GRCm39) |
E108* |
probably null |
Het |
Braf |
A |
T |
6: 39,637,933 (GRCm39) |
|
probably null |
Het |
Calr3 |
G |
A |
8: 73,185,240 (GRCm39) |
Q112* |
probably null |
Het |
Dis3 |
A |
G |
14: 99,320,110 (GRCm39) |
I649T |
probably damaging |
Het |
Dop1b |
T |
C |
16: 93,577,670 (GRCm39) |
V65A |
probably benign |
Het |
Dpp4 |
A |
G |
2: 62,209,646 (GRCm39) |
Y126H |
probably damaging |
Het |
Dtwd2 |
A |
T |
18: 49,856,776 (GRCm39) |
Y170* |
probably null |
Het |
Efcab7 |
A |
G |
4: 99,719,700 (GRCm39) |
T61A |
probably benign |
Het |
Fbxl3 |
G |
T |
14: 103,332,730 (GRCm39) |
L83M |
probably damaging |
Het |
Fbxo17 |
A |
C |
7: 28,434,766 (GRCm39) |
S184R |
probably damaging |
Het |
Fcf1 |
T |
C |
12: 85,029,106 (GRCm39) |
|
probably null |
Het |
Hcrtr2 |
T |
C |
9: 76,153,723 (GRCm39) |
Y223C |
probably damaging |
Het |
Kcnn1 |
A |
G |
8: 71,300,706 (GRCm39) |
F432S |
probably benign |
Het |
Kmt2a |
C |
T |
9: 44,719,231 (GRCm39) |
|
probably benign |
Het |
Lce1j |
T |
C |
3: 92,696,713 (GRCm39) |
T22A |
unknown |
Het |
Lrfn5 |
T |
A |
12: 61,890,912 (GRCm39) |
S734T |
probably benign |
Het |
Lyst |
T |
A |
13: 13,852,760 (GRCm39) |
S2253R |
possibly damaging |
Het |
Msantd5f1 |
C |
T |
4: 73,605,570 (GRCm39) |
T327I |
probably damaging |
Het |
Myrfl |
G |
A |
10: 116,632,011 (GRCm39) |
L645F |
possibly damaging |
Het |
Nudt9 |
A |
G |
5: 104,209,628 (GRCm39) |
|
probably benign |
Het |
Ostn |
T |
A |
16: 27,140,132 (GRCm39) |
M15K |
possibly damaging |
Het |
Psg20 |
T |
C |
7: 18,408,536 (GRCm39) |
T395A |
possibly damaging |
Het |
Rpf1 |
G |
A |
3: 146,218,002 (GRCm39) |
H171Y |
probably benign |
Het |
Shprh |
A |
G |
10: 11,063,902 (GRCm39) |
E1325G |
probably damaging |
Het |
Slc22a8 |
G |
T |
19: 8,571,499 (GRCm39) |
V77L |
probably benign |
Het |
Tbck |
A |
C |
3: 132,428,501 (GRCm39) |
K285N |
probably benign |
Het |
Zdhhc20 |
A |
G |
14: 58,111,381 (GRCm39) |
I73T |
probably damaging |
Het |
Zfp512b |
T |
C |
2: 181,228,862 (GRCm39) |
D701G |
probably damaging |
Het |
Zfp735 |
T |
A |
11: 73,602,192 (GRCm39) |
Y379N |
possibly damaging |
Het |
Znfx1 |
G |
T |
2: 166,878,843 (GRCm39) |
H980Q |
probably damaging |
Het |
|
Other mutations in Vmn1r86 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01124:Vmn1r86
|
APN |
7 |
12,836,856 (GRCm39) |
missense |
probably benign |
0.04 |
IGL01291:Vmn1r86
|
APN |
7 |
12,836,433 (GRCm39) |
missense |
probably benign |
0.14 |
IGL02347:Vmn1r86
|
APN |
7 |
12,836,574 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL02457:Vmn1r86
|
APN |
7 |
12,836,707 (GRCm39) |
missense |
probably benign |
|
IGL02983:Vmn1r86
|
APN |
7 |
12,836,741 (GRCm39) |
missense |
probably damaging |
1.00 |
ANU05:Vmn1r86
|
UTSW |
7 |
12,836,433 (GRCm39) |
missense |
probably benign |
0.14 |
R0304:Vmn1r86
|
UTSW |
7 |
12,836,707 (GRCm39) |
missense |
probably benign |
|
R0525:Vmn1r86
|
UTSW |
7 |
12,836,088 (GRCm39) |
missense |
probably benign |
0.13 |
R1958:Vmn1r86
|
UTSW |
7 |
12,836,621 (GRCm39) |
missense |
possibly damaging |
0.94 |
R2227:Vmn1r86
|
UTSW |
7 |
12,836,847 (GRCm39) |
missense |
probably benign |
0.00 |
R3149:Vmn1r86
|
UTSW |
7 |
12,836,358 (GRCm39) |
nonsense |
probably null |
|
R3896:Vmn1r86
|
UTSW |
7 |
12,836,093 (GRCm39) |
missense |
probably benign |
0.18 |
R4735:Vmn1r86
|
UTSW |
7 |
12,836,221 (GRCm39) |
missense |
probably damaging |
1.00 |
R5219:Vmn1r86
|
UTSW |
7 |
12,836,382 (GRCm39) |
missense |
probably damaging |
1.00 |
R6003:Vmn1r86
|
UTSW |
7 |
12,836,125 (GRCm39) |
nonsense |
probably null |
|
R6457:Vmn1r86
|
UTSW |
7 |
12,836,279 (GRCm39) |
missense |
possibly damaging |
0.70 |
R7442:Vmn1r86
|
UTSW |
7 |
12,835,983 (GRCm39) |
missense |
possibly damaging |
0.70 |
R7622:Vmn1r86
|
UTSW |
7 |
12,836,685 (GRCm39) |
missense |
probably benign |
0.07 |
R8436:Vmn1r86
|
UTSW |
7 |
12,836,771 (GRCm39) |
missense |
probably benign |
0.25 |
R9141:Vmn1r86
|
UTSW |
7 |
12,836,789 (GRCm39) |
nonsense |
probably null |
|
R9374:Vmn1r86
|
UTSW |
7 |
12,836,781 (GRCm39) |
missense |
possibly damaging |
0.86 |
R9398:Vmn1r86
|
UTSW |
7 |
12,836,261 (GRCm39) |
missense |
probably damaging |
0.98 |
R9551:Vmn1r86
|
UTSW |
7 |
12,836,781 (GRCm39) |
missense |
possibly damaging |
0.86 |
R9552:Vmn1r86
|
UTSW |
7 |
12,836,781 (GRCm39) |
missense |
possibly damaging |
0.86 |
R9606:Vmn1r86
|
UTSW |
7 |
12,836,741 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Posted On |
2012-04-20 |