Incidental Mutation 'IGL01459:Tatdn2'
| ID |
87951 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Tatdn2
|
| Ensembl Gene |
ENSMUSG00000056952 |
| Gene Name |
TatD DNase domain containing 2 |
| Synonyms |
mKIAA0218 |
| Accession Numbers |
|
| Essential gene? |
Essential
(E-score: 1.000)
|
| Stock # |
IGL01459
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
6 |
| Chromosomal Location |
113674090-113688030 bp(+) (GRCm39) |
| Type of Mutation |
splice site |
| DNA Base Change (assembly) |
T to A
at 113686992 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000145308
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000089018]
[ENSMUST00000113022]
[ENSMUST00000153661]
[ENSMUST00000204753]
|
| AlphaFold |
B7ZNL9 |
| Predicted Effect |
probably null
Transcript: ENSMUST00000089018
|
| SMART Domains |
Protein: ENSMUSP00000086412
Gene: ENSMUSG00000056952
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
63 |
95 |
N/A |
INTRINSIC |
|
low complexity region
|
237 |
255 |
N/A |
INTRINSIC |
|
low complexity region
|
382 |
392 |
N/A |
INTRINSIC |
|
Pfam:TatD_DNase
|
457 |
721 |
3.3e-59 |
PFAM |
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000113022
|
| SMART Domains |
Protein: ENSMUSP00000108645
Gene: ENSMUSG00000056952
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
63 |
95 |
N/A |
INTRINSIC |
|
low complexity region
|
237 |
255 |
N/A |
INTRINSIC |
|
low complexity region
|
443 |
453 |
N/A |
INTRINSIC |
|
Pfam:TatD_DNase
|
518 |
782 |
3.7e-61 |
PFAM |
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000138420
|
| SMART Domains |
Protein: ENSMUSP00000116559
Gene: ENSMUSG00000056952
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:TatD_DNase
|
1 |
146 |
2.9e-38 |
PFAM |
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000153661
|
| SMART Domains |
Protein: ENSMUSP00000123557
Gene: ENSMUSG00000056952
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:TatD_DNase
|
1 |
122 |
1.3e-22 |
PFAM |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000182250
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000200187
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000204753
|
| SMART Domains |
Protein: ENSMUSP00000145308
Gene: ENSMUSG00000056952
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
63 |
95 |
N/A |
INTRINSIC |
|
low complexity region
|
237 |
255 |
N/A |
INTRINSIC |
|
low complexity region
|
443 |
453 |
N/A |
INTRINSIC |
|
Pfam:TatD_DNase
|
518 |
782 |
3.7e-61 |
PFAM |
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 41 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Atp2a2 |
A |
G |
5: 122,607,715 (GRCm39) |
S265P |
probably benign |
Het |
| Brwd1 |
A |
G |
16: 95,848,620 (GRCm39) |
F520L |
probably damaging |
Het |
| Cdh5 |
A |
T |
8: 104,864,449 (GRCm39) |
D470V |
probably damaging |
Het |
| Cdr2l |
A |
G |
11: 115,281,378 (GRCm39) |
R41G |
probably damaging |
Het |
| Csrnp1 |
C |
T |
9: 119,802,024 (GRCm39) |
C345Y |
probably damaging |
Het |
| Dscaml1 |
T |
A |
9: 45,653,981 (GRCm39) |
Y1419* |
probably null |
Het |
| Entpd3 |
T |
C |
9: 120,391,007 (GRCm39) |
S420P |
probably damaging |
Het |
| Epb41 |
A |
G |
4: 131,691,439 (GRCm39) |
|
probably benign |
Het |
| Erg |
A |
G |
16: 95,162,141 (GRCm39) |
S322P |
probably damaging |
Het |
| Fndc3b |
T |
A |
3: 27,515,889 (GRCm39) |
H639L |
probably benign |
Het |
| Grwd1 |
C |
T |
7: 45,479,834 (GRCm39) |
|
probably null |
Het |
| Kbtbd8 |
A |
G |
6: 95,099,789 (GRCm39) |
N356D |
probably benign |
Het |
| Kif15 |
A |
G |
9: 122,804,820 (GRCm39) |
E189G |
probably damaging |
Het |
| Kif2b |
T |
C |
11: 91,467,849 (GRCm39) |
K145E |
possibly damaging |
Het |
| Kif5c |
A |
G |
2: 49,625,569 (GRCm39) |
D613G |
probably benign |
Het |
| Lipe |
T |
G |
7: 25,082,967 (GRCm39) |
Q457P |
probably damaging |
Het |
| Lrp1b |
A |
T |
2: 40,750,726 (GRCm39) |
I2946N |
probably damaging |
Het |
| Mtf2 |
C |
T |
5: 108,228,809 (GRCm39) |
P42S |
probably damaging |
Het |
| Neb |
A |
G |
2: 52,066,804 (GRCm39) |
S5886P |
probably damaging |
Het |
| Nmu |
A |
G |
5: 76,506,196 (GRCm39) |
|
probably null |
Het |
| Nup153 |
T |
C |
13: 46,866,402 (GRCm39) |
E214G |
possibly damaging |
Het |
| Or14c44 |
A |
C |
7: 86,061,759 (GRCm39) |
N104T |
probably damaging |
Het |
| Or6c66b |
G |
A |
10: 129,376,410 (GRCm39) |
M1I |
probably null |
Het |
| Paqr3 |
T |
C |
5: 97,243,796 (GRCm39) |
D306G |
probably benign |
Het |
| Plxna2 |
A |
G |
1: 194,446,878 (GRCm39) |
D796G |
probably benign |
Het |
| Prkra |
A |
G |
2: 76,460,780 (GRCm39) |
L306S |
probably damaging |
Het |
| Psg20 |
T |
A |
7: 18,416,638 (GRCm39) |
E159D |
probably damaging |
Het |
| Ptchd3 |
G |
T |
11: 121,721,246 (GRCm39) |
V40L |
probably benign |
Het |
| Rfx5 |
T |
C |
3: 94,865,086 (GRCm39) |
|
probably benign |
Het |
| Rimbp2 |
A |
G |
5: 128,865,275 (GRCm39) |
|
probably null |
Het |
| Slc22a4 |
C |
A |
11: 53,877,303 (GRCm39) |
|
probably null |
Het |
| Tars1 |
A |
G |
15: 11,391,940 (GRCm39) |
V265A |
possibly damaging |
Het |
| Tenm4 |
C |
T |
7: 96,378,592 (GRCm39) |
P399L |
probably damaging |
Het |
| Tmem135 |
A |
T |
7: 88,800,646 (GRCm39) |
D325E |
probably damaging |
Het |
| Tmprss7 |
A |
T |
16: 45,483,706 (GRCm39) |
I556N |
probably benign |
Het |
| Tom1l2 |
C |
T |
11: 60,171,095 (GRCm39) |
G23S |
probably damaging |
Het |
| Ubr2 |
A |
G |
17: 47,241,435 (GRCm39) |
|
probably benign |
Het |
| Vmn1r197 |
T |
C |
13: 22,512,241 (GRCm39) |
I54T |
probably benign |
Het |
| Vmn2r116 |
T |
C |
17: 23,603,903 (GRCm39) |
C43R |
probably damaging |
Het |
| Vps33a |
A |
G |
5: 123,673,371 (GRCm39) |
L405P |
probably benign |
Het |
| Zfp473 |
C |
T |
7: 44,388,987 (GRCm39) |
D45N |
probably damaging |
Het |
|
| Other mutations in Tatdn2 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01302:Tatdn2
|
APN |
6 |
113,680,985 (GRCm39) |
splice site |
probably benign |
|
|
IGL01335:Tatdn2
|
APN |
6 |
113,681,017 (GRCm39) |
missense |
probably benign |
0.29 |
|
IGL02406:Tatdn2
|
APN |
6 |
113,681,174 (GRCm39) |
missense |
probably benign |
0.41 |
|
IGL02728:Tatdn2
|
APN |
6 |
113,681,676 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0321:Tatdn2
|
UTSW |
6 |
113,686,462 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0506:Tatdn2
|
UTSW |
6 |
113,679,550 (GRCm39) |
missense |
probably benign |
0.13 |
|
R0583:Tatdn2
|
UTSW |
6 |
113,679,486 (GRCm39) |
missense |
possibly damaging |
0.80 |
|
R1022:Tatdn2
|
UTSW |
6 |
113,686,506 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1024:Tatdn2
|
UTSW |
6 |
113,686,506 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1301:Tatdn2
|
UTSW |
6 |
113,681,076 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1454:Tatdn2
|
UTSW |
6 |
113,681,288 (GRCm39) |
missense |
probably benign |
0.26 |
|
R1459:Tatdn2
|
UTSW |
6 |
113,687,031 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1710:Tatdn2
|
UTSW |
6 |
113,674,888 (GRCm39) |
missense |
possibly damaging |
0.90 |
|
R1771:Tatdn2
|
UTSW |
6 |
113,679,060 (GRCm39) |
critical splice acceptor site |
probably null |
|
|
R2064:Tatdn2
|
UTSW |
6 |
113,681,103 (GRCm39) |
missense |
probably benign |
0.41 |
|
R2065:Tatdn2
|
UTSW |
6 |
113,681,103 (GRCm39) |
missense |
probably benign |
0.41 |
|
R2067:Tatdn2
|
UTSW |
6 |
113,681,103 (GRCm39) |
missense |
probably benign |
0.41 |
|
R4446:Tatdn2
|
UTSW |
6 |
113,679,501 (GRCm39) |
critical splice donor site |
probably null |
|
|
R4654:Tatdn2
|
UTSW |
6 |
113,684,326 (GRCm39) |
missense |
probably benign |
0.09 |
|
R4888:Tatdn2
|
UTSW |
6 |
113,681,566 (GRCm39) |
missense |
possibly damaging |
0.66 |
|
R7378:Tatdn2
|
UTSW |
6 |
113,681,662 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7971:Tatdn2
|
UTSW |
6 |
113,687,235 (GRCm39) |
splice site |
probably null |
|
|
R8086:Tatdn2
|
UTSW |
6 |
113,686,482 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8833:Tatdn2
|
UTSW |
6 |
113,684,348 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8872:Tatdn2
|
UTSW |
6 |
113,681,170 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9186:Tatdn2
|
UTSW |
6 |
113,687,125 (GRCm39) |
missense |
probably benign |
0.13 |
|
R9234:Tatdn2
|
UTSW |
6 |
113,679,683 (GRCm39) |
critical splice donor site |
probably null |
|
|
| Posted On |
2013-11-18 |
Incidental Mutation