Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL00706:Wdr3'

14835

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Wdr3

Ensembl Gene

ENSMUSG00000033285

Gene Name

WD repeat domain 3

Synonyms

D030020G18Rik

Accession Numbers

Essential gene?

Probably essential (E-score: 0.955) question?

Stock #

IGL00706

Quality Score

Status

Chromosome

Chromosomal Location

100045496-100069723 bp(-) (GRCm39)

Type of Mutation

unclassified

DNA Base Change (assembly)

G to A at 100055416 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Ref Sequence

ENSEMBL: ENSMUSP00000134066 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000052120] [ENSMUST00000164539]

AlphaFold

Q8BHB4

Predicted Effect

probably benign
Transcript: ENSMUST00000052120

SMART Domains

Protein: ENSMUSP00000060613
Gene: ENSMUSG00000033285

Domain	Start	End	E-Value	Type
Blast:WD40	12	51	3e-16	BLAST
WD40	54	93	3.14e-6	SMART
WD40	96	135	1.04e-6	SMART
WD40	138	177	1.15e-4	SMART
WD40	180	219	4.24e-3	SMART
low complexity region	225	239	N/A	INTRINSIC
Blast:WD40	267	307	3e-18	BLAST
low complexity region	316	331	N/A	INTRINSIC
WD40	403	441	8.49e-3	SMART
WD40	444	481	1.71e1	SMART
WD40	484	523	2.1e-7	SMART
WD40	538	576	1.2e-2	SMART
WD40	579	618	2.45e-8	SMART
WD40	621	660	5.47e-6	SMART
WD40	663	702	1.03e-10	SMART
low complexity region	711	724	N/A	INTRINSIC
Pfam:Utp12	803	906	6.4e-25	PFAM
low complexity region	927	936	N/A	INTRINSIC

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000129319

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000146989

SMART Domains

Protein: ENSMUSP00000134945
Gene: ENSMUSG00000033285

Domain	Start	End	E-Value	Type
Blast:WD40	12	51	1e-18	BLAST

Predicted Effect

probably benign
Transcript: ENSMUST00000164539

SMART Domains

Protein: ENSMUSP00000134066
Gene: ENSMUSG00000027867

Domain	Start	End	E-Value	Type
low complexity region	155	170	N/A	INTRINSIC
low complexity region	384	400	N/A	INTRINSIC
low complexity region	876	887	N/A	INTRINSIC
coiled coil region	909	964	N/A	INTRINSIC
coiled coil region	1079	1120	N/A	INTRINSIC
low complexity region	1179	1190	N/A	INTRINSIC
low complexity region	1192	1205	N/A	INTRINSIC
low complexity region	1209	1220	N/A	INTRINSIC
low complexity region	1223	1238	N/A	INTRINSIC
low complexity region	1394	1405	N/A	INTRINSIC
low complexity region	1931	1942	N/A	INTRINSIC
Pfam:PapD-like	2171	2277	1.2e-15	PFAM

Coding Region Coverage

Validation Efficiency

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a nuclear protein containing 10 WD repeats. WD repeats are approximately 30- to 40-amino acid domains containing several conserved residues, which usually include a trp-asp at the C-terminal end. Proteins belonging to the WD repeat family are involved in a variety of cellular processes, including cell cycle progression, signal transduction, apoptosis, and gene regulation. [provided by RefSeq, Jul 2008]

Allele List at MGI

Other mutations in this stock

Total: 17 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Ahnak	C	A	19: 8,991,094 (GRCm39)	S4126*	probably null	Het
Arhgap26	T	A	18: 39,419,604 (GRCm39)	N521K	probably damaging	Het
Bard1	C	T	1: 71,070,585 (GRCm39)	R633H	probably benign	Het
Cntn3	C	T	6: 102,180,910 (GRCm39)	V762I	probably benign	Het
Cyp2e1	T	C	7: 140,349,066 (GRCm39)	I132T	probably benign	Het
Cyp2t4	T	C	7: 26,854,583 (GRCm39)	I13T	probably benign	Het
Dhx36	A	T	3: 62,404,263 (GRCm39)	C227S	probably damaging	Het
Fetub	A	G	16: 22,754,446 (GRCm39)	T138A	probably benign	Het
Gab3	C	T	X: 74,048,965 (GRCm39)	S362N	probably benign	Het
Gpr158	T	C	2: 21,751,584 (GRCm39)	L501P	probably damaging	Het
Ifit1bl2	T	A	19: 34,596,282 (GRCm39)	T445S	probably benign	Het
Kdm5a	T	A	6: 120,383,597 (GRCm39)	D779E	possibly damaging	Het
Ms4a5	C	T	19: 11,261,142 (GRCm39)	V6I	probably benign	Het
Rgl3	A	G	9: 21,888,535 (GRCm39)	F425S	probably damaging	Het
Rnf6	T	C	5: 146,148,715 (GRCm39)	D112G	possibly damaging	Het
Spink12	G	A	18: 44,240,872 (GRCm39)	C86Y	probably damaging	Het
Styxl2	T	C	1: 165,928,121 (GRCm39)	E497G	probably benign	Het

Other mutations in Wdr3

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00420:Wdr3	APN	3	100,055,424 (GRCm39)	missense	probably damaging	1.00
IGL01391:Wdr3	APN	3	100,054,105 (GRCm39)	unclassified	probably benign
IGL02008:Wdr3	APN	3	100,058,298 (GRCm39)	missense	probably damaging	0.97
IGL02136:Wdr3	APN	3	100,046,041 (GRCm39)	nonsense	probably null
IGL02215:Wdr3	APN	3	100,054,016 (GRCm39)	critical splice donor site	probably null
IGL02505:Wdr3	APN	3	100,059,290 (GRCm39)	missense	probably benign
IGL03412:Wdr3	APN	3	100,059,293 (GRCm39)	missense	probably benign	0.00
R0241:Wdr3	UTSW	3	100,052,973 (GRCm39)	missense	probably damaging	1.00
R0241:Wdr3	UTSW	3	100,052,973 (GRCm39)	missense	probably damaging	1.00
R0369:Wdr3	UTSW	3	100,063,734 (GRCm39)	nonsense	probably null
R0865:Wdr3	UTSW	3	100,060,112 (GRCm39)	unclassified	probably benign
R0966:Wdr3	UTSW	3	100,068,385 (GRCm39)	missense	probably damaging	0.99
R1168:Wdr3	UTSW	3	100,049,535 (GRCm39)	missense	probably benign	0.11
R1612:Wdr3	UTSW	3	100,058,515 (GRCm39)	splice site	probably benign
R1768:Wdr3	UTSW	3	100,061,186 (GRCm39)	missense	probably benign
R2060:Wdr3	UTSW	3	100,067,213 (GRCm39)	splice site	probably null
R3793:Wdr3	UTSW	3	100,059,281 (GRCm39)	missense	probably benign	0.02
R3888:Wdr3	UTSW	3	100,061,222 (GRCm39)	missense	probably benign
R4410:Wdr3	UTSW	3	100,047,543 (GRCm39)	missense	probably benign
R4596:Wdr3	UTSW	3	100,060,183 (GRCm39)	missense	possibly damaging	0.95
R4609:Wdr3	UTSW	3	100,047,516 (GRCm39)	missense	probably damaging	1.00
R4817:Wdr3	UTSW	3	100,053,861 (GRCm39)	missense	possibly damaging	0.71
R5016:Wdr3	UTSW	3	100,048,936 (GRCm39)	intron	probably benign
R5024:Wdr3	UTSW	3	100,062,252 (GRCm39)	missense	probably benign
R5411:Wdr3	UTSW	3	100,050,300 (GRCm39)	missense	probably damaging	1.00
R5430:Wdr3	UTSW	3	100,064,643 (GRCm39)	missense	possibly damaging	0.88
R5902:Wdr3	UTSW	3	100,051,807 (GRCm39)	unclassified	probably benign
R6177:Wdr3	UTSW	3	100,068,468 (GRCm39)	missense	probably damaging	0.97
R6445:Wdr3	UTSW	3	100,063,719 (GRCm39)	missense	possibly damaging	0.65
R6516:Wdr3	UTSW	3	100,052,992 (GRCm39)	missense	probably damaging	1.00
R6624:Wdr3	UTSW	3	100,051,642 (GRCm39)	missense	probably damaging	1.00
R6747:Wdr3	UTSW	3	100,046,040 (GRCm39)	missense	probably damaging	1.00
R6813:Wdr3	UTSW	3	100,046,041 (GRCm39)	nonsense	probably null
R6899:Wdr3	UTSW	3	100,057,217 (GRCm39)	missense	possibly damaging	0.90
R7024:Wdr3	UTSW	3	100,062,313 (GRCm39)	missense	probably benign	0.00
R7509:Wdr3	UTSW	3	100,058,503 (GRCm39)	missense	probably benign	0.03
R8008:Wdr3	UTSW	3	100,062,252 (GRCm39)	missense	probably benign
R8062:Wdr3	UTSW	3	100,049,810 (GRCm39)	missense	probably benign
R8241:Wdr3	UTSW	3	100,057,259 (GRCm39)	missense	probably damaging	1.00
R8840:Wdr3	UTSW	3	100,057,253 (GRCm39)	missense	probably damaging	0.99
R8944:Wdr3	UTSW	3	100,057,259 (GRCm39)	missense	probably damaging	1.00
R9235:Wdr3	UTSW	3	100,054,023 (GRCm39)	missense	probably benign	0.18
R9314:Wdr3	UTSW	3	100,050,288 (GRCm39)	missense	probably benign	0.00
R9544:Wdr3	UTSW	3	100,050,752 (GRCm39)	nonsense	probably null
X0012:Wdr3	UTSW	3	100,052,946 (GRCm39)	splice site	probably null
Z1088:Wdr3	UTSW	3	100,051,660 (GRCm39)	missense	probably benign	0.00

Posted On

2012-12-06