Incidental Mutation 'R1257:Or6c209'
| ID |
151498 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Or6c209
|
| Ensembl Gene |
ENSMUSG00000094734 |
| Gene Name |
olfactory receptor family 6 subfamily C member 209 |
| Synonyms |
GA_x6K02T2PULF-11325750-11326685, MOR114-2, Olfr799 |
| MMRRC Submission |
039324-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.053)
|
| Stock # |
R1257 (G1)
|
| Quality Score |
225 |
|
Status
|
Not validated
|
| Chromosome |
10 |
| Chromosomal Location |
129482999-129483934 bp(+) (GRCm39) |
| Type of Mutation |
nonsense |
| DNA Base Change (assembly) |
A to T
at 129483413 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Lysine to Stop codon
at position 139
(K139*)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000150406
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000071126]
[ENSMUST00000213820]
[ENSMUST00000214182]
[ENSMUST00000216446]
[ENSMUST00000217364]
|
| AlphaFold |
Q8VGI7 |
| Predicted Effect |
probably null
Transcript: ENSMUST00000071126
AA Change: K139*
|
| SMART Domains |
Protein: ENSMUSP00000071126
Gene: ENSMUSG00000094734
AA Change: K139*
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
28 |
305 |
6e-46 |
PFAM |
|
Pfam:7TM_GPCR_Srsx
|
32 |
302 |
6e-7 |
PFAM |
|
Pfam:7tm_1
|
38 |
287 |
7.7e-24 |
PFAM |
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000213820
AA Change: K139*
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000214182
AA Change: K139*
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000216446
AA Change: K139*
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000217364
AA Change: K139*
|
| Coding Region Coverage |
- 1x: 99.0%
- 3x: 98.2%
- 10x: 95.9%
- 20x: 91.7%
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 27 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Acoxl |
A |
T |
2: 127,886,286 (GRCm39) |
T174S |
probably benign |
Het |
| Ank3 |
C |
T |
10: 69,710,665 (GRCm39) |
R408* |
probably null |
Het |
| Ceacam15 |
A |
G |
7: 16,405,949 (GRCm39) |
S201P |
possibly damaging |
Het |
| Ceacam20 |
A |
G |
7: 19,708,117 (GRCm39) |
I241V |
probably benign |
Het |
| Cfap46 |
A |
T |
7: 139,234,545 (GRCm39) |
L237* |
probably null |
Het |
| Col4a3 |
T |
A |
1: 82,694,086 (GRCm39) |
C133S |
probably damaging |
Het |
| Dnajc9 |
G |
A |
14: 20,438,765 (GRCm39) |
|
probably null |
Het |
| Dnhd1 |
T |
A |
7: 105,343,360 (GRCm39) |
V1568D |
probably damaging |
Het |
| Gli3 |
C |
T |
13: 15,900,581 (GRCm39) |
Q1323* |
probably null |
Het |
| Grhpr |
A |
G |
4: 44,989,045 (GRCm39) |
N287S |
probably damaging |
Het |
| H2bl1 |
A |
T |
13: 99,121,023 (GRCm39) |
M1K |
probably null |
Het |
| Hectd4 |
G |
A |
5: 121,456,687 (GRCm39) |
W684* |
probably null |
Het |
| Kifc3 |
A |
G |
8: 95,832,400 (GRCm39) |
V474A |
probably damaging |
Het |
| Lrrc37 |
A |
G |
11: 103,425,467 (GRCm39) |
V1462A |
unknown |
Het |
| Mdn1 |
A |
T |
4: 32,667,089 (GRCm39) |
|
probably null |
Het |
| Med7 |
C |
G |
11: 46,331,460 (GRCm39) |
I18M |
probably damaging |
Het |
| Nid1 |
T |
C |
13: 13,658,375 (GRCm39) |
Y707H |
probably benign |
Het |
| Nol4 |
A |
T |
18: 22,903,738 (GRCm39) |
N339K |
probably damaging |
Het |
| Rbm34 |
C |
T |
8: 127,697,643 (GRCm39) |
G23S |
possibly damaging |
Het |
| Rps19bp1 |
CCTTCTTCTTCTTCTTCTTCTT |
CCTTCTTCTTCTTCTTCTT |
15: 80,145,250 (GRCm39) |
|
probably benign |
Het |
| Shf |
G |
A |
2: 122,199,163 (GRCm39) |
P51S |
probably damaging |
Het |
| Snap25 |
A |
T |
2: 136,600,268 (GRCm39) |
E37V |
probably damaging |
Het |
| Taf1a |
A |
G |
1: 183,179,175 (GRCm39) |
T118A |
possibly damaging |
Het |
| Tasor2 |
T |
C |
13: 3,625,049 (GRCm39) |
T1634A |
probably benign |
Het |
| Thrb |
T |
A |
14: 18,008,642 (GRCm38) |
I122K |
probably damaging |
Het |
| Xkr4 |
T |
G |
1: 3,287,036 (GRCm39) |
I385L |
probably benign |
Het |
| Zeb1 |
G |
T |
18: 5,772,699 (GRCm39) |
R996L |
possibly damaging |
Het |
|
| Other mutations in Or6c209 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00335:Or6c209
|
APN |
10 |
129,483,306 (GRCm39) |
missense |
probably benign |
0.09 |
|
IGL01079:Or6c209
|
APN |
10 |
129,483,243 (GRCm39) |
missense |
possibly damaging |
0.79 |
|
IGL01095:Or6c209
|
APN |
10 |
129,483,498 (GRCm39) |
missense |
probably benign |
0.00 |
|
R0080:Or6c209
|
UTSW |
10 |
129,483,522 (GRCm39) |
missense |
probably benign |
0.00 |
|
R0082:Or6c209
|
UTSW |
10 |
129,483,522 (GRCm39) |
missense |
probably benign |
0.00 |
|
R0268:Or6c209
|
UTSW |
10 |
129,483,045 (GRCm39) |
missense |
possibly damaging |
0.94 |
|
R0310:Or6c209
|
UTSW |
10 |
129,483,600 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0315:Or6c209
|
UTSW |
10 |
129,483,366 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0545:Or6c209
|
UTSW |
10 |
129,483,218 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2355:Or6c209
|
UTSW |
10 |
129,483,711 (GRCm39) |
missense |
probably benign |
0.02 |
|
R4905:Or6c209
|
UTSW |
10 |
129,483,792 (GRCm39) |
missense |
possibly damaging |
0.88 |
|
R5706:Or6c209
|
UTSW |
10 |
129,483,960 (GRCm39) |
splice site |
probably null |
|
|
R5961:Or6c209
|
UTSW |
10 |
129,483,723 (GRCm39) |
missense |
possibly damaging |
0.58 |
|
R6233:Or6c209
|
UTSW |
10 |
129,483,165 (GRCm39) |
missense |
probably benign |
0.01 |
|
R6843:Or6c209
|
UTSW |
10 |
129,483,048 (GRCm39) |
missense |
possibly damaging |
0.86 |
|
R7426:Or6c209
|
UTSW |
10 |
129,483,027 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7507:Or6c209
|
UTSW |
10 |
129,483,366 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7871:Or6c209
|
UTSW |
10 |
129,483,281 (GRCm39) |
missense |
probably benign |
|
|
R8315:Or6c209
|
UTSW |
10 |
129,483,522 (GRCm39) |
missense |
probably benign |
0.00 |
|
R9153:Or6c209
|
UTSW |
10 |
129,483,306 (GRCm39) |
missense |
possibly damaging |
0.84 |
|
| Predicted Primers |
PCR Primer
(F):5'- GAGATTGGCACCTGACTCAACTCTG -3'
(R):5'- TGATGATGAATGTCAACACCGCACC -3'
Sequencing Primer
(F):5'- TCTGACAGATGACATTAGGCTGC -3'
(R):5'- GCACCAGCTATCACCATCTG -3'
|
| Posted On |
2014-01-29 |
Incidental Mutation