Incidental Mutation 'IGL01861:Tubb4b-ps1'
ID 178338
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Tubb4b-ps1
Ensembl Gene ENSMUSG00000095159
Gene Name tubulin, beta 4B class IVB, pseudogene 1
Synonyms Tubb2c-ps1, Tubb2c2, ENSMUSG00000056506
Accession Numbers
Essential gene? Not available question?
Stock # IGL01861
Quality Score
Status
Chromosome 5
Chromosomal Location 7229365-7230700 bp(+) (GRCm39)
Type of Mutation intron
DNA Base Change (assembly) A to G at 7229374 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000143568 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000200317]
AlphaFold no structure available at present
Predicted Effect noncoding transcript
Transcript: ENSMUST00000082917
Predicted Effect noncoding transcript
Transcript: ENSMUST00000179460
SMART Domains Protein: ENSMUSP00000136922
Gene: ENSMUSG00000095159

DomainStartEndE-ValueType
Tubulin 47 243 6.6e-61 SMART
Tubulin_C 245 382 4.17e-49 SMART
low complexity region 427 444 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000200317
SMART Domains Protein: ENSMUSP00000143568
Gene: ENSMUSG00000092094

DomainStartEndE-ValueType
ZnF_C2H2 56 80 2e-2 SMART
low complexity region 958 970 N/A INTRINSIC
low complexity region 1155 1179 N/A INTRINSIC
low complexity region 1196 1207 N/A INTRINSIC
low complexity region 1215 1234 N/A INTRINSIC
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 32 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Arrdc5 T C 17: 56,607,144 (GRCm39) T34A possibly damaging Het
Atm C A 9: 53,405,912 (GRCm39) R1252L probably null Het
Cd34 T C 1: 194,640,888 (GRCm39) probably benign Het
Cmya5 A G 13: 93,226,256 (GRCm39) V2944A probably damaging Het
Cntnap3 C T 13: 64,946,922 (GRCm39) G169D probably damaging Het
Dnah7a T A 1: 53,679,508 (GRCm39) T326S probably benign Het
Dnah7a C T 1: 53,623,608 (GRCm39) probably benign Het
Fam133b A G 5: 3,614,242 (GRCm39) probably benign Het
Fhod1 A G 8: 106,057,808 (GRCm39) S906P probably damaging Het
Gli3 A G 13: 15,899,910 (GRCm39) Y1099C probably damaging Het
Gpr63 C T 4: 25,008,545 (GRCm39) T423M probably damaging Het
Hpx A T 7: 105,241,393 (GRCm39) Y339* probably null Het
Lingo2 A T 4: 35,709,526 (GRCm39) D151E probably benign Het
Mill2 A T 7: 18,590,565 (GRCm39) Q215L probably damaging Het
Naf1 T C 8: 67,317,185 (GRCm39) probably benign Het
Ndufv1 A G 19: 4,058,803 (GRCm39) V235A probably benign Het
Or8b41 T C 9: 38,055,046 (GRCm39) I205T probably damaging Het
Pafah1b1 A T 11: 74,581,403 (GRCm39) N22K possibly damaging Het
Prune1 G T 3: 95,172,868 (GRCm39) R66S probably damaging Het
Ptcd1 A T 5: 145,095,587 (GRCm39) I291N possibly damaging Het
Ptprk A G 10: 28,259,441 (GRCm39) I294V possibly damaging Het
Rfx6 G A 10: 51,597,675 (GRCm39) V471M probably damaging Het
Rnase6 C A 14: 51,367,748 (GRCm39) Q47K probably benign Het
Skint5 T C 4: 113,417,021 (GRCm39) probably benign Het
Srcap T A 7: 127,124,457 (GRCm39) probably benign Het
Stap1 A G 5: 86,244,383 (GRCm39) I217V possibly damaging Het
Taf1d T C 9: 15,220,035 (GRCm39) probably null Het
Tecta T C 9: 42,284,658 (GRCm39) H809R probably benign Het
Tex15 A G 8: 34,060,717 (GRCm39) N49S probably damaging Het
Uhrf2 A G 19: 30,063,804 (GRCm39) Y589C probably damaging Het
Zfp616 A T 11: 73,973,742 (GRCm39) T4S possibly damaging Het
Zfp687 A T 3: 94,919,171 (GRCm39) F200L probably damaging Het
Other mutations in Tubb4b-ps1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00973:Tubb4b-ps1 APN 5 7,229,408 (GRCm39) intron probably benign
IGL01980:Tubb4b-ps1 APN 5 7,229,843 (GRCm39) intron probably benign
IGL02336:Tubb4b-ps1 APN 5 7,229,952 (GRCm39) intron probably benign
IGL03152:Tubb4b-ps1 APN 5 7,230,001 (GRCm39) intron probably benign
IGL03166:Tubb4b-ps1 APN 5 7,229,965 (GRCm39) intron probably benign
IGL03279:Tubb4b-ps1 APN 5 7,229,630 (GRCm39) intron probably benign
Posted On 2014-05-07