Incidental Mutation 'R4241:Or7c70'
| ID |
320221 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Or7c70
|
| Ensembl Gene |
ENSMUSG00000051190 |
| Gene Name |
olfactory receptor family 7 subfamily C member 70 |
| Synonyms |
MOR142-2_p, Olfr1356, MOR142-1, GA_x6K02T2QGN0-2962025-2962987 |
| MMRRC Submission |
041058-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.236)
|
| Stock # |
R4241 (G1)
|
| Quality Score |
225 |
|
Status
|
Validated
|
| Chromosome |
10 |
| Chromosomal Location |
78682785-78683747 bp(-) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
T to A
at 78683739 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Arginine to Serine
at position 3
(R3S)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000144815
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000061289]
[ENSMUST00000205100]
|
| AlphaFold |
Q7TQU8 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000061289
AA Change: R3S
PolyPhen 2
Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)
|
| SMART Domains |
Protein: ENSMUSP00000054345
Gene: ENSMUSG00000051190
AA Change: R3S
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
31 |
308 |
3.6e-58 |
PFAM |
|
Pfam:7TM_GPCR_Srsx
|
35 |
305 |
1.4e-5 |
PFAM |
|
Pfam:7tm_1
|
41 |
290 |
6.5e-22 |
PFAM |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000205100
AA Change: R3S
PolyPhen 2
Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)
|
| SMART Domains |
Protein: ENSMUSP00000144815
Gene: ENSMUSG00000051190
AA Change: R3S
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
31 |
308 |
3.6e-58 |
PFAM |
|
Pfam:7TM_GPCR_Srsx
|
35 |
305 |
1.4e-5 |
PFAM |
|
Pfam:7tm_1
|
41 |
290 |
6.5e-22 |
PFAM |
|
| Meta Mutation Damage Score |
0.0978 |
| Coding Region Coverage |
- 1x: 99.3%
- 3x: 98.8%
- 10x: 97.6%
- 20x: 95.9%
|
| Validation Efficiency |
98% (49/50) |
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 44 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Agl |
A |
T |
3: 116,548,497 (GRCm39) |
|
probably benign |
Het |
| Ap5b1 |
C |
T |
19: 5,618,825 (GRCm39) |
L82F |
possibly damaging |
Het |
| Arfgef3 |
A |
G |
10: 18,500,912 (GRCm39) |
S1113P |
probably damaging |
Het |
| Atoh1 |
A |
C |
6: 64,706,758 (GRCm39) |
N151T |
probably damaging |
Het |
| Bcas3 |
T |
A |
11: 85,361,652 (GRCm39) |
S25R |
probably damaging |
Het |
| Blcap |
T |
A |
2: 157,402,343 (GRCm39) |
|
probably benign |
Het |
| Btbd6 |
C |
T |
12: 112,940,416 (GRCm39) |
A13V |
probably benign |
Het |
| Ccdc83 |
A |
C |
7: 89,896,346 (GRCm39) |
N74K |
probably damaging |
Het |
| Cdh9 |
A |
G |
15: 16,849,165 (GRCm39) |
|
probably null |
Het |
| Chd1 |
C |
T |
17: 15,990,289 (GRCm39) |
R1614* |
probably null |
Het |
| Col16a1 |
G |
T |
4: 129,992,843 (GRCm39) |
Q1567H |
probably damaging |
Het |
| Coq6 |
A |
T |
12: 84,420,563 (GRCm39) |
|
probably benign |
Het |
| Cpd |
T |
C |
11: 76,737,611 (GRCm39) |
D61G |
probably benign |
Het |
| Csnk1e |
A |
G |
15: 79,309,095 (GRCm39) |
F277S |
probably damaging |
Het |
| Cyp2d41-ps |
T |
A |
15: 82,663,787 (GRCm39) |
|
noncoding transcript |
Het |
| Dbt |
T |
C |
3: 116,326,945 (GRCm39) |
I98T |
probably damaging |
Het |
| Eif3e |
G |
A |
15: 43,126,086 (GRCm39) |
T287I |
probably damaging |
Het |
| Fcgbpl1 |
A |
G |
7: 27,853,760 (GRCm39) |
S1575G |
probably damaging |
Het |
| Gm7135 |
A |
G |
1: 97,281,678 (GRCm39) |
|
noncoding transcript |
Het |
| Gpr176 |
A |
T |
2: 118,110,091 (GRCm39) |
S389R |
probably benign |
Het |
| Hax1 |
A |
G |
3: 89,902,997 (GRCm39) |
S257P |
probably damaging |
Het |
| Herc1 |
CTGAGGACTCTTTG |
CTG |
9: 66,355,630 (GRCm39) |
|
probably null |
Het |
| Ighv1-53 |
C |
T |
12: 115,122,442 (GRCm39) |
C5Y |
probably benign |
Het |
| Klhl13 |
T |
A |
X: 23,181,414 (GRCm39) |
D2V |
probably damaging |
Het |
| Kynu |
A |
T |
2: 43,571,422 (GRCm39) |
H446L |
probably benign |
Het |
| Lingo1 |
A |
G |
9: 56,527,386 (GRCm39) |
F401S |
probably damaging |
Het |
| Lmbrd1 |
C |
T |
1: 24,732,049 (GRCm39) |
Q89* |
probably null |
Het |
| Mov10 |
T |
A |
3: 104,704,592 (GRCm39) |
Q773L |
probably benign |
Het |
| Or52e19 |
G |
T |
7: 102,959,868 (GRCm39) |
*313Y |
probably null |
Het |
| Pde6c |
G |
A |
19: 38,151,293 (GRCm39) |
G608S |
probably damaging |
Het |
| Peli3 |
T |
C |
19: 4,982,426 (GRCm39) |
H413R |
probably damaging |
Het |
| Pkdrej |
C |
T |
15: 85,702,345 (GRCm39) |
R1197Q |
probably damaging |
Het |
| Rcan2 |
T |
A |
17: 44,264,370 (GRCm39) |
V10D |
probably benign |
Het |
| Slc10a5 |
A |
G |
3: 10,400,520 (GRCm39) |
S47P |
probably damaging |
Het |
| Sprr3 |
A |
G |
3: 92,364,214 (GRCm39) |
V210A |
possibly damaging |
Het |
| Tcerg1l |
G |
T |
7: 137,999,361 (GRCm39) |
Q8K |
unknown |
Het |
| Ubfd1 |
T |
C |
7: 121,670,977 (GRCm39) |
V265A |
possibly damaging |
Het |
| Ubr1 |
T |
C |
2: 120,764,867 (GRCm39) |
D529G |
possibly damaging |
Het |
| Vmn1r180 |
A |
T |
7: 23,652,298 (GRCm39) |
I154F |
probably damaging |
Het |
| Vmn1r237 |
A |
G |
17: 21,534,925 (GRCm39) |
H216R |
possibly damaging |
Het |
| Whrn |
C |
T |
4: 63,351,210 (GRCm39) |
|
probably benign |
Het |
| Zfr |
T |
G |
15: 12,149,745 (GRCm39) |
D388E |
probably damaging |
Het |
| Zic5 |
T |
C |
14: 122,702,075 (GRCm39) |
I219V |
probably benign |
Het |
| Zmat5 |
A |
G |
11: 4,678,614 (GRCm39) |
N53D |
probably benign |
Het |
|
| Other mutations in Or7c70 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00904:Or7c70
|
APN |
10 |
78,683,597 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL01343:Or7c70
|
APN |
10 |
78,683,431 (GRCm39) |
missense |
probably damaging |
0.97 |
|
IGL01576:Or7c70
|
APN |
10 |
78,683,207 (GRCm39) |
missense |
possibly damaging |
0.94 |
|
IGL02314:Or7c70
|
APN |
10 |
78,683,099 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02474:Or7c70
|
APN |
10 |
78,682,897 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02960:Or7c70
|
APN |
10 |
78,683,371 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL03049:Or7c70
|
APN |
10 |
78,683,356 (GRCm39) |
missense |
possibly damaging |
0.81 |
|
IGL03328:Or7c70
|
APN |
10 |
78,683,201 (GRCm39) |
missense |
probably benign |
0.39 |
|
R1602:Or7c70
|
UTSW |
10 |
78,682,802 (GRCm39) |
missense |
probably benign |
|
|
R1722:Or7c70
|
UTSW |
10 |
78,682,805 (GRCm39) |
missense |
probably benign |
|
|
R2178:Or7c70
|
UTSW |
10 |
78,683,612 (GRCm39) |
missense |
probably damaging |
0.96 |
|
R3903:Or7c70
|
UTSW |
10 |
78,683,132 (GRCm39) |
missense |
probably benign |
0.00 |
|
R3904:Or7c70
|
UTSW |
10 |
78,683,132 (GRCm39) |
missense |
probably benign |
0.00 |
|
R4833:Or7c70
|
UTSW |
10 |
78,683,409 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5465:Or7c70
|
UTSW |
10 |
78,682,852 (GRCm39) |
missense |
probably benign |
0.00 |
|
R5527:Or7c70
|
UTSW |
10 |
78,683,609 (GRCm39) |
missense |
probably benign |
0.02 |
|
R5606:Or7c70
|
UTSW |
10 |
78,683,395 (GRCm39) |
missense |
probably benign |
0.19 |
|
R5977:Or7c70
|
UTSW |
10 |
78,683,572 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
R6219:Or7c70
|
UTSW |
10 |
78,683,093 (GRCm39) |
missense |
possibly damaging |
0.88 |
|
R6996:Or7c70
|
UTSW |
10 |
78,683,351 (GRCm39) |
missense |
probably benign |
0.00 |
|
R7136:Or7c70
|
UTSW |
10 |
78,683,615 (GRCm39) |
missense |
probably benign |
0.43 |
|
R7782:Or7c70
|
UTSW |
10 |
78,683,447 (GRCm39) |
missense |
probably benign |
0.01 |
|
R7996:Or7c70
|
UTSW |
10 |
78,683,155 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8955:Or7c70
|
UTSW |
10 |
78,683,576 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9330:Or7c70
|
UTSW |
10 |
78,683,153 (GRCm39) |
missense |
probably benign |
0.00 |
|
R9427:Or7c70
|
UTSW |
10 |
78,682,906 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R9474:Or7c70
|
UTSW |
10 |
78,682,891 (GRCm39) |
missense |
probably damaging |
0.99 |
|
Z1176:Or7c70
|
UTSW |
10 |
78,682,855 (GRCm39) |
missense |
possibly damaging |
0.73 |
|
Z1177:Or7c70
|
UTSW |
10 |
78,683,290 (GRCm39) |
missense |
probably damaging |
1.00 |
|
| Predicted Primers |
PCR Primer
(F):5'- CATGGGCATGTGCAGGTGG -3'
(R):5'- AGTGCTCCCAATACTTTGTTTGG -3'
Sequencing Primer
(F):5'- GGGGTCAGATATGATGGCCAC -3'
(R):5'- GCAGGATCCACTTGAGA -3'
|
| Posted On |
2015-06-12 |
Incidental Mutation