Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL03338:Ranbp3l'

417103

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Ranbp3l

Ensembl Gene

ENSMUSG00000048424

Gene Name

RAN binding protein 3-like

Synonyms

C130037N17Rik

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.095) question?

Stock #

IGL03338

Quality Score

Status

Chromosome

Chromosomal Location

8997433-9067417 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 9060940 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Glutamic Acid to Glycine at position 403 (E403G)

Ref Sequence

ENSEMBL: ENSMUSP00000055750 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000053308] [ENSMUST00000227191]

AlphaFold

Q6PDH4

Predicted Effect

probably damaging
Transcript: ENSMUST00000053308
AA Change: E403G

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)

SMART Domains

Protein: ENSMUSP00000055750
Gene: ENSMUSG00000048424
AA Change: E403G

Domain	Start	End	E-Value	Type
low complexity region	19	31	N/A	INTRINSIC
low complexity region	118	129	N/A	INTRINSIC
low complexity region	191	197	N/A	INTRINSIC
RanBD	302	430	4.52e-13	SMART

Predicted Effect

possibly damaging
Transcript: ENSMUST00000227191
AA Change: E267G

PolyPhen 2 Score 0.883 (Sensitivity: 0.82; Specificity: 0.94)

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 49 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abcb1a	G	A	5: 8,744,153 (GRCm39)	V260M	probably damaging	Het
Accsl	T	A	2: 93,686,092 (GRCm39)	H575L	probably benign	Het
Armc3	A	T	2: 19,253,512 (GRCm39)	I218F	possibly damaging	Het
Bora	C	A	14: 99,310,178 (GRCm39)	N502K	probably damaging	Het
Brd4	T	A	17: 32,432,046 (GRCm39)	D606V	probably damaging	Het
Ccdc190	T	A	1: 169,757,544 (GRCm39)	M1K	probably null	Het
Ccl25	T	C	8: 4,399,898 (GRCm39)		probably benign	Het
Cep78	G	T	19: 15,936,987 (GRCm39)	T573K	probably damaging	Het
Ces1d	C	A	8: 93,896,346 (GRCm39)		probably null	Het
Cntn4	C	T	6: 106,632,550 (GRCm39)	H525Y	probably damaging	Het
D630039A03Rik	T	C	4: 57,910,509 (GRCm39)	E101G	probably benign	Het
Dnah2	A	G	11: 69,387,403 (GRCm39)	V941A	probably benign	Het
Exoc6b	A	G	6: 84,821,112 (GRCm39)	I559T	probably damaging	Het
Fmr1	T	C	X: 67,731,942 (GRCm39)		probably null	Het
Ghr	A	T	15: 3,377,024 (GRCm39)	C66S	probably damaging	Het
Hook1	C	A	4: 95,886,929 (GRCm39)		probably benign	Het
Igsf1	T	C	X: 48,876,376 (GRCm39)	T73A	probably benign	Het
Ipo8	T	C	6: 148,701,755 (GRCm39)	K451R	probably benign	Het
Irs1	A	G	1: 82,266,122 (GRCm39)	V698A	probably benign	Het
Kat2a	T	C	11: 100,602,301 (GRCm39)	D151G	probably benign	Het
Lyrm1	A	T	7: 119,513,469 (GRCm39)	Q78L	probably benign	Het
Madd	C	T	2: 90,992,507 (GRCm39)	G1012E	possibly damaging	Het
Mboat1	T	A	13: 30,320,742 (GRCm39)	D31E	probably benign	Het
Myh8	C	A	11: 67,189,172 (GRCm39)	A1116D	probably damaging	Het
Nop2	G	A	6: 125,116,695 (GRCm39)		probably null	Het
Notch1	A	G	2: 26,349,971 (GRCm39)	S2390P	probably benign	Het
Or10ag57	T	G	2: 87,218,470 (GRCm39)	N140K	probably benign	Het
Or52z14	T	A	7: 103,253,615 (GRCm39)	C251*	probably null	Het
Or6c66b	A	G	10: 129,376,925 (GRCm39)	D173G	probably damaging	Het
Pigg	T	C	5: 108,467,816 (GRCm39)	S272P	probably damaging	Het
Plg	A	G	17: 12,637,959 (GRCm39)	Y795C	probably damaging	Het
Polr3e	A	G	7: 120,536,843 (GRCm39)	K335R	probably benign	Het
Pramel13	T	A	4: 144,121,397 (GRCm39)	Y209F	probably benign	Het
Pramel24	T	C	4: 143,453,312 (GRCm39)	I140T	probably benign	Het
Pramel28	T	C	4: 143,692,411 (GRCm39)	I197V	probably benign	Het
Pramel28	T	A	4: 143,692,608 (GRCm39)	Q131L	probably benign	Het
Prdm4	A	T	10: 85,743,685 (GRCm39)	M190K	possibly damaging	Het
Prex2	T	A	1: 11,210,489 (GRCm39)	F597L	probably benign	Het
Rgmb	C	T	17: 16,027,565 (GRCm39)	A385T	possibly damaging	Het
Scn4a	T	A	11: 106,211,671 (GRCm39)	I1449F	probably damaging	Het
Slc17a9	T	C	2: 180,382,311 (GRCm39)		probably benign	Het
Slc26a2	T	C	18: 61,331,974 (GRCm39)	I486V	probably damaging	Het
Sntn	A	T	14: 13,678,991 (GRCm38)	D55V	probably damaging	Het
Snx25	T	A	8: 46,498,247 (GRCm39)	R595S	probably benign	Het
Spag11b	C	T	8: 19,191,426 (GRCm39)	T33I	probably damaging	Het
Sval2	A	G	6: 41,841,181 (GRCm39)	I81M	probably damaging	Het
Tab2	A	G	10: 7,795,039 (GRCm39)	V481A	probably damaging	Het
Zfp867	G	A	11: 59,355,003 (GRCm39)	Q109*	probably null	Het
Zfp935	T	C	13: 62,602,247 (GRCm39)	T318A	probably benign	Het

Other mutations in Ranbp3l

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01746:Ranbp3l	APN	15	9,063,167 (GRCm39)	nonsense	probably null
IGL01982:Ranbp3l	APN	15	9,058,827 (GRCm39)	missense	probably damaging	0.99
IGL02549:Ranbp3l	APN	15	8,997,925 (GRCm39)	missense	possibly damaging	0.66
IGL03170:Ranbp3l	APN	15	9,029,611 (GRCm39)	missense	probably damaging	1.00
PIT4791001:Ranbp3l	UTSW	15	9,060,829 (GRCm39)	missense	probably damaging	1.00
R0137:Ranbp3l	UTSW	15	9,063,067 (GRCm39)	missense	probably damaging	1.00
R0383:Ranbp3l	UTSW	15	9,063,184 (GRCm39)	missense	possibly damaging	0.48
R0699:Ranbp3l	UTSW	15	9,058,850 (GRCm39)	critical splice donor site	probably null
R1517:Ranbp3l	UTSW	15	9,065,081 (GRCm39)	nonsense	probably null
R1629:Ranbp3l	UTSW	15	9,065,068 (GRCm39)	missense	probably damaging	0.99
R1922:Ranbp3l	UTSW	15	9,057,206 (GRCm39)	missense	probably damaging	1.00
R2058:Ranbp3l	UTSW	15	9,029,641 (GRCm39)	missense	probably damaging	1.00
R2265:Ranbp3l	UTSW	15	9,057,194 (GRCm39)	missense	probably damaging	0.99
R2512:Ranbp3l	UTSW	15	8,997,949 (GRCm39)	missense	probably benign	0.00
R4077:Ranbp3l	UTSW	15	9,060,838 (GRCm39)	missense	probably damaging	1.00
R4079:Ranbp3l	UTSW	15	9,060,838 (GRCm39)	missense	probably damaging	1.00
R4179:Ranbp3l	UTSW	15	9,057,279 (GRCm39)	missense	possibly damaging	0.62
R5227:Ranbp3l	UTSW	15	9,037,186 (GRCm39)	missense	probably damaging	0.99
R5265:Ranbp3l	UTSW	15	9,037,077 (GRCm39)	missense	probably benign	0.01
R5722:Ranbp3l	UTSW	15	9,029,656 (GRCm39)	missense	probably damaging	0.98
R5751:Ranbp3l	UTSW	15	9,063,169 (GRCm39)	missense	probably damaging	1.00
R5976:Ranbp3l	UTSW	15	9,030,916 (GRCm39)	missense	possibly damaging	0.85
R6504:Ranbp3l	UTSW	15	8,997,946 (GRCm39)	missense	probably benign	0.27
R6850:Ranbp3l	UTSW	15	9,058,808 (GRCm39)	missense	probably damaging	1.00
R6940:Ranbp3l	UTSW	15	9,041,792 (GRCm39)	missense	probably benign	0.03
R7009:Ranbp3l	UTSW	15	9,063,064 (GRCm39)	missense	probably damaging	1.00
R7018:Ranbp3l	UTSW	15	9,037,159 (GRCm39)	missense	probably benign	0.00
R7019:Ranbp3l	UTSW	15	9,057,241 (GRCm39)	missense	probably damaging	0.99
R7250:Ranbp3l	UTSW	15	9,041,853 (GRCm39)	missense	probably benign
R7352:Ranbp3l	UTSW	15	8,997,842 (GRCm39)	start gained	probably benign
R7483:Ranbp3l	UTSW	15	9,030,955 (GRCm39)	missense	possibly damaging	0.86
R8210:Ranbp3l	UTSW	15	9,065,059 (GRCm39)	missense	probably benign	0.00
R9255:Ranbp3l	UTSW	15	9,057,293 (GRCm39)	missense	probably benign	0.00
R9389:Ranbp3l	UTSW	15	9,057,304 (GRCm39)	missense	probably damaging	1.00
R9511:Ranbp3l	UTSW	15	9,041,991 (GRCm39)	intron	probably benign
R9513:Ranbp3l	UTSW	15	9,037,176 (GRCm39)	nonsense	probably null

Posted On

2016-08-02