Mutagenetix > Incidental Mutation

Incidental Mutation 'R5549:3425401B19Rik'

435057

Institutional Source

Beutler Lab

Gene Symbol

3425401B19Rik

Ensembl Gene

ENSMUSG00000071540

Gene Name

RIKEN cDNA 3425401B19 gene

Synonyms

MMRRC Submission

043106-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.072) question?

Stock #

R5549 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

32381076-32407250 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 32384993 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Glutamic Acid to Glycine at position 324 (E324G)

Ref Sequence

ENSEMBL: ENSMUSP00000093741 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000096038]

AlphaFold

D3Z1D3

Predicted Effect

possibly damaging
Transcript: ENSMUST00000096038
AA Change: E324G

PolyPhen 2 Score 0.682 (Sensitivity: 0.86; Specificity: 0.92)

SMART Domains

Protein: ENSMUSP00000093741
Gene: ENSMUSG00000071540
AA Change: E324G

Domain	Start	End	E-Value	Type
low complexity region	135	145	N/A	INTRINSIC
low complexity region	162	175	N/A	INTRINSIC
low complexity region	386	399	N/A	INTRINSIC
low complexity region	587	602	N/A	INTRINSIC
low complexity region	605	624	N/A	INTRINSIC
low complexity region	728	744	N/A	INTRINSIC
low complexity region	1002	1015	N/A	INTRINSIC
low complexity region	1086	1097	N/A	INTRINSIC
low complexity region	1147	1158	N/A	INTRINSIC
low complexity region	1161	1176	N/A	INTRINSIC
Pfam:DUF4585	1251	1322	6.5e-30	PFAM

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000226958

Coding Region Coverage

1x: 99.9%
3x: 99.7%
10x: 98.6%
20x: 95.9%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 50 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Acad8	C	T	9: 26,896,847 (GRCm39)	R204Q	probably damaging	Het
Adgrg7	T	G	16: 56,570,790 (GRCm39)	T413P	probably damaging	Het
Ankrd11	A	G	8: 123,617,117 (GRCm39)	I2224T	probably benign	Het
Arhgap23	A	G	11: 97,357,394 (GRCm39)	D964G	probably damaging	Het
Atf6b	A	G	17: 34,870,657 (GRCm39)	D367G	probably damaging	Het
Axdnd1	A	G	1: 156,226,104 (GRCm39)	L131P	probably damaging	Het
Bmp8b	T	C	4: 123,018,278 (GRCm39)	V383A	probably damaging	Het
C5ar2	A	G	7: 15,970,868 (GRCm39)	V353A	probably damaging	Het
Ccr5	C	A	9: 123,925,408 (GRCm39)	A337E	probably benign	Het
Cftr	G	A	6: 18,227,953 (GRCm39)	V382I	probably benign	Het
Csmd3	G	C	15: 48,048,753 (GRCm39)	S446C	probably damaging	Het
Cyp2d12	A	G	15: 82,440,498 (GRCm39)	T96A	probably benign	Het
Diaph3	T	G	14: 87,216,106 (GRCm39)	I465L	probably benign	Het
Fabp3	A	G	4: 130,209,018 (GRCm39)	*134W	probably null	Het
Fgf22	G	T	10: 79,592,696 (GRCm39)	M130I	probably damaging	Het
Flnc	G	A	6: 29,453,690 (GRCm39)	V1792M	probably damaging	Het
Grik3	G	A	4: 125,579,838 (GRCm39)	A528T	possibly damaging	Het
Hecw2	G	A	1: 53,964,850 (GRCm39)	R659W	possibly damaging	Het
Hmbs	C	T	9: 44,250,774 (GRCm39)		probably null	Het
Ift122	T	G	6: 115,868,983 (GRCm39)	L490R	probably damaging	Het
Igkv4-63	T	C	6: 69,355,116 (GRCm39)	H55R	probably damaging	Het
Itga4	A	T	2: 79,086,611 (GRCm39)	N96I	probably damaging	Het
Kcna7	A	T	7: 45,056,063 (GRCm39)	H93L	probably damaging	Het
Klhdc7b	A	G	15: 89,271,562 (GRCm39)	I815V	probably benign	Het
Lcmt1	G	A	7: 123,027,330 (GRCm39)	E298K	probably damaging	Het
Ly6g6f	A	G	17: 35,302,333 (GRCm39)	V68A	possibly damaging	Het
Map3k8	C	T	18: 4,340,762 (GRCm39)	C184Y	probably damaging	Het
Mcemp1	A	G	8: 3,718,340 (GRCm39)	T183A	possibly damaging	Het
Mobp	T	G	9: 119,996,876 (GRCm39)	S2R	probably damaging	Het
Mprip	A	G	11: 59,651,644 (GRCm39)	S1783G	probably benign	Het
Mterf3	C	A	13: 67,076,321 (GRCm39)	A129S	probably benign	Het
Nfkb2	G	T	19: 46,296,006 (GRCm39)	E170D	probably benign	Het
Nr2c1	A	G	10: 94,003,558 (GRCm39)	T239A	probably benign	Het
Odr4	A	G	1: 150,247,909 (GRCm39)	S325P	possibly damaging	Het
Oplah	G	A	15: 76,182,466 (GRCm39)	A963V	probably damaging	Het
Or13a26	A	G	7: 140,284,712 (GRCm39)		probably null	Het
Parp14	C	T	16: 35,661,505 (GRCm39)	S1481N	probably benign	Het
Prxl2a	T	C	14: 40,726,013 (GRCm39)	K44E	possibly damaging	Het
Rictor	C	T	15: 6,816,391 (GRCm39)	T1221M	probably damaging	Het
Rpe	G	A	1: 66,755,163 (GRCm39)	D182N	probably damaging	Het
Slc24a3	C	A	2: 145,448,784 (GRCm39)	P443T	probably damaging	Het
Slc25a47	T	C	12: 108,822,143 (GRCm39)	*311Q	probably null	Het
Sox2	C	G	3: 34,705,142 (GRCm39)	A193G	probably benign	Het
Svep1	T	C	4: 58,057,954 (GRCm39)	S3284G	probably benign	Het
Zfp369	A	T	13: 65,445,194 (GRCm39)	H779L	probably damaging	Het
Zfp513	A	T	5: 31,357,947 (GRCm39)	L144Q	possibly damaging	Het
Zfp526	T	C	7: 24,925,109 (GRCm39)	F456S	possibly damaging	Het
Zfp791	C	T	8: 85,836,835 (GRCm39)	G343D	probably damaging	Het
Zfp941	A	C	7: 140,388,021 (GRCm39)	I664S	possibly damaging	Het
Zkscan3	A	G	13: 21,578,233 (GRCm39)	V189A	probably damaging	Het

Other mutations in 3425401B19Rik

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00839:3425401B19Rik	APN	14	32,382,873 (GRCm39)	missense	probably benign	0.18
IGL00844:3425401B19Rik	APN	14	32,384,956 (GRCm39)	nonsense	probably null
IGL01292:3425401B19Rik	APN	14	32,382,831 (GRCm39)	missense	probably benign	0.18
IGL01295:3425401B19Rik	APN	14	32,383,893 (GRCm39)	missense	possibly damaging	0.53
IGL01457:3425401B19Rik	APN	14	32,382,908 (GRCm39)	missense	probably benign
IGL01470:3425401B19Rik	APN	14	32,382,414 (GRCm39)	missense	possibly damaging	0.53
IGL01612:3425401B19Rik	APN	14	32,381,988 (GRCm39)	missense	possibly damaging	0.53
IGL01974:3425401B19Rik	APN	14	32,381,762 (GRCm39)	missense	possibly damaging	0.85
IGL02095:3425401B19Rik	APN	14	32,383,583 (GRCm39)	missense	probably benign	0.33
IGL02138:3425401B19Rik	APN	14	32,384,672 (GRCm39)	missense	possibly damaging	0.83
IGL02178:3425401B19Rik	APN	14	32,384,418 (GRCm39)	missense	possibly damaging	0.83
IGL02245:3425401B19Rik	APN	14	32,381,772 (GRCm39)	missense	probably benign	0.03
IGL02529:3425401B19Rik	APN	14	32,383,190 (GRCm39)	missense	probably benign
IGL03401:3425401B19Rik	APN	14	32,384,223 (GRCm39)	nonsense	probably null
PIT4515001:3425401B19Rik	UTSW	14	32,383,068 (GRCm39)	nonsense	probably null
R0233:3425401B19Rik	UTSW	14	32,385,330 (GRCm39)	missense	probably benign
R0233:3425401B19Rik	UTSW	14	32,385,330 (GRCm39)	missense	probably benign
R0320:3425401B19Rik	UTSW	14	32,384,571 (GRCm39)	missense	probably benign	0.19
R0519:3425401B19Rik	UTSW	14	32,384,919 (GRCm39)	missense	possibly damaging	0.92
R0551:3425401B19Rik	UTSW	14	32,384,598 (GRCm39)	missense	probably benign	0.03
R0759:3425401B19Rik	UTSW	14	32,384,454 (GRCm39)	missense	possibly damaging	0.93
R0831:3425401B19Rik	UTSW	14	32,384,228 (GRCm39)	missense	probably benign	0.01
R1124:3425401B19Rik	UTSW	14	32,384,039 (GRCm39)	missense	possibly damaging	0.53
R1346:3425401B19Rik	UTSW	14	32,382,771 (GRCm39)	missense	probably benign	0.07
R1997:3425401B19Rik	UTSW	14	32,382,005 (GRCm39)	missense	possibly damaging	0.71
R2055:3425401B19Rik	UTSW	14	32,384,508 (GRCm39)	missense	probably benign
R2212:3425401B19Rik	UTSW	14	32,383,559 (GRCm39)	missense	probably benign	0.33
R2416:3425401B19Rik	UTSW	14	32,385,791 (GRCm39)	missense	probably benign	0.04
R2441:3425401B19Rik	UTSW	14	32,385,449 (GRCm39)	missense	possibly damaging	0.53
R2513:3425401B19Rik	UTSW	14	32,383,809 (GRCm39)	missense	possibly damaging	0.53
R3414:3425401B19Rik	UTSW	14	32,383,559 (GRCm39)	missense	probably benign	0.33
R3800:3425401B19Rik	UTSW	14	32,385,025 (GRCm39)	missense	possibly damaging	0.83
R3809:3425401B19Rik	UTSW	14	32,385,650 (GRCm39)	missense	possibly damaging	0.96
R4166:3425401B19Rik	UTSW	14	32,382,912 (GRCm39)	missense	possibly damaging	0.53
R4581:3425401B19Rik	UTSW	14	32,383,828 (GRCm39)	missense	possibly damaging	0.73
R4721:3425401B19Rik	UTSW	14	32,385,107 (GRCm39)	missense	probably benign	0.01
R4769:3425401B19Rik	UTSW	14	32,382,174 (GRCm39)	missense	probably benign	0.32
R4809:3425401B19Rik	UTSW	14	32,384,588 (GRCm39)	missense	probably benign	0.19
R4919:3425401B19Rik	UTSW	14	32,385,245 (GRCm39)	missense	possibly damaging	0.85
R4925:3425401B19Rik	UTSW	14	32,385,137 (GRCm39)	missense	possibly damaging	0.86
R4972:3425401B19Rik	UTSW	14	32,383,361 (GRCm39)	missense	possibly damaging	0.73
R5068:3425401B19Rik	UTSW	14	32,383,749 (GRCm39)	missense	possibly damaging	0.73
R5069:3425401B19Rik	UTSW	14	32,383,749 (GRCm39)	missense	possibly damaging	0.73
R5070:3425401B19Rik	UTSW	14	32,383,749 (GRCm39)	missense	possibly damaging	0.73
R5258:3425401B19Rik	UTSW	14	32,385,266 (GRCm39)	missense	probably damaging	0.98
R5435:3425401B19Rik	UTSW	14	32,383,413 (GRCm39)	missense	probably benign	0.18
R5678:3425401B19Rik	UTSW	14	32,384,010 (GRCm39)	missense	probably damaging	0.97
R5680:3425401B19Rik	UTSW	14	32,384,010 (GRCm39)	missense	probably damaging	0.97
R5872:3425401B19Rik	UTSW	14	32,382,309 (GRCm39)	missense	possibly damaging	0.73
R5896:3425401B19Rik	UTSW	14	32,383,632 (GRCm39)	nonsense	probably null
R5940:3425401B19Rik	UTSW	14	32,384,645 (GRCm39)	missense	possibly damaging	0.91
R6044:3425401B19Rik	UTSW	14	32,382,614 (GRCm39)	missense	possibly damaging	0.53
R6136:3425401B19Rik	UTSW	14	32,384,239 (GRCm39)	missense	possibly damaging	0.70
R6277:3425401B19Rik	UTSW	14	32,385,651 (GRCm39)	missense	possibly damaging	0.86
R6385:3425401B19Rik	UTSW	14	32,383,236 (GRCm39)	missense	probably benign	0.01
R6728:3425401B19Rik	UTSW	14	32,384,645 (GRCm39)	missense	possibly damaging	0.91
R6984:3425401B19Rik	UTSW	14	32,383,937 (GRCm39)	missense	probably benign	0.00
R7047:3425401B19Rik	UTSW	14	32,382,131 (GRCm39)	missense	possibly damaging	0.89
R7249:3425401B19Rik	UTSW	14	32,385,271 (GRCm39)	missense	possibly damaging	0.73
R7493:3425401B19Rik	UTSW	14	32,385,257 (GRCm39)	missense	possibly damaging	0.96
R7575:3425401B19Rik	UTSW	14	32,384,589 (GRCm39)	missense	probably benign	0.03
R7742:3425401B19Rik	UTSW	14	32,384,714 (GRCm39)	missense	possibly damaging	0.68
R7747:3425401B19Rik	UTSW	14	32,385,026 (GRCm39)	missense	possibly damaging	0.83
R7784:3425401B19Rik	UTSW	14	32,381,797 (GRCm39)	missense	probably benign	0.00
R8098:3425401B19Rik	UTSW	14	32,384,618 (GRCm39)	missense	probably damaging	0.99
R8111:3425401B19Rik	UTSW	14	32,382,266 (GRCm39)	nonsense	probably null
R8171:3425401B19Rik	UTSW	14	32,383,982 (GRCm39)	missense	probably benign
R8276:3425401B19Rik	UTSW	14	32,385,885 (GRCm39)	missense	probably damaging	0.97
R8330:3425401B19Rik	UTSW	14	32,381,750 (GRCm39)	missense	probably damaging	0.98
R8422:3425401B19Rik	UTSW	14	32,384,254 (GRCm39)	missense	possibly damaging	0.84
R8464:3425401B19Rik	UTSW	14	32,381,934 (GRCm39)	missense	possibly damaging	0.53
R8880:3425401B19Rik	UTSW	14	32,382,837 (GRCm39)	missense	probably benign	0.33
R8898:3425401B19Rik	UTSW	14	32,383,001 (GRCm39)	nonsense	probably null
R8911:3425401B19Rik	UTSW	14	32,383,626 (GRCm39)	missense	possibly damaging	0.53
R8934:3425401B19Rik	UTSW	14	32,382,614 (GRCm39)	missense	possibly damaging	0.53
R9094:3425401B19Rik	UTSW	14	32,382,614 (GRCm39)	missense	possibly damaging	0.53
R9399:3425401B19Rik	UTSW	14	32,384,615 (GRCm39)	missense	probably damaging	0.98
R9435:3425401B19Rik	UTSW	14	32,382,562 (GRCm39)	missense	probably benign	0.08
R9485:3425401B19Rik	UTSW	14	32,383,400 (GRCm39)	missense	possibly damaging	0.85
R9766:3425401B19Rik	UTSW	14	32,385,788 (GRCm39)	missense	probably benign	0.00
X0025:3425401B19Rik	UTSW	14	32,384,426 (GRCm39)	missense	probably damaging	0.98
Z1177:3425401B19Rik	UTSW	14	32,383,355 (GRCm39)	missense	probably damaging	0.99
Z1177:3425401B19Rik	UTSW	14	32,381,765 (GRCm39)	missense	possibly damaging	0.86

Predicted Primers

PCR Primer
(F):5'- TTACTCCGCTTCACCTGAGG -3'
(R):5'- TGAGCCAAGGTATCCCTCTC -3'

Sequencing Primer
(F):5'- AGGGTCAATCTGTGAAGCATTCCC -3'
(R):5'- CCACAGCTGAGCCAGGAAG -3'

Posted On

2016-10-24