Incidental Mutation 'R5539:Or14j4'
| ID |
435847 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Or14j4
|
| Ensembl Gene |
ENSMUSG00000092413 |
| Gene Name |
olfactory receptor family 14 subfamily J member 4 |
| Synonyms |
GA_x6K02T2PSCP-2070203-2069271, MOR218-11P, Olfr115 |
| MMRRC Submission |
043097-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.059)
|
| Stock # |
R5539 (G1)
|
| Quality Score |
225 |
|
Status
|
Not validated
|
| Chromosome |
17 |
| Chromosomal Location |
37920676-37921670 bp(-) (GRCm39) |
| Type of Mutation |
start codon destroyed |
| DNA Base Change (assembly) |
T to A
at 37921646 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Methionine to Leucine
at position 1
(M1L)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000076203
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000076936]
[ENSMUST00000221552]
[ENSMUST00000223366]
|
| AlphaFold |
Q7TRJ8 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000076936
AA Change: M1L
PolyPhen 2
Score 0.002 (Sensitivity: 0.99; Specificity: 0.30)
|
| SMART Domains |
Protein: ENSMUSP00000076203
Gene: ENSMUSG00000092413
AA Change: M1L
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7TM_GPCR_Srv
|
24 |
252 |
2.6e-7 |
PFAM |
|
Pfam:7tm_4
|
31 |
308 |
3.2e-45 |
PFAM |
|
Pfam:7tm_1
|
41 |
290 |
2.3e-21 |
PFAM |
|
| Predicted Effect |
|
| SMART Domains |
Protein: ENSMUSP00000133907
Gene: ENSMUSG00000092413
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
31 |
308 |
8.2e-46 |
PFAM |
|
Pfam:7TM_GPCR_Srx
|
32 |
307 |
2.9e-9 |
PFAM |
|
Pfam:7TM_GPCR_Srsx
|
35 |
305 |
3.4e-8 |
PFAM |
|
Pfam:7tm_1
|
41 |
290 |
5.6e-20 |
PFAM |
|
| Predicted Effect |
not run
Transcript: ENSMUST00000194511
AA Change: M1L
|
| Predicted Effect |
not run
Transcript: ENSMUST00000202918
AA Change: M1L
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000207850
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000221552
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000223366
|
| Coding Region Coverage |
- 1x: 99.9%
- 3x: 99.7%
- 10x: 98.6%
- 20x: 96.1%
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 44 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| 2310034C09Rik |
A |
T |
16: 88,555,917 (GRCm39) |
S44C |
probably damaging |
Het |
| Abca4 |
A |
G |
3: 121,963,557 (GRCm39) |
I846V |
probably damaging |
Het |
| Aldh4a1 |
T |
C |
4: 139,365,833 (GRCm39) |
S275P |
probably benign |
Het |
| Arhgap12 |
A |
T |
18: 6,111,932 (GRCm39) |
L144H |
probably benign |
Het |
| Ccdc141 |
A |
T |
2: 76,845,437 (GRCm39) |
I1210N |
probably damaging |
Het |
| Ccdc175 |
T |
C |
12: 72,191,587 (GRCm39) |
T330A |
probably benign |
Het |
| Cybb |
C |
G |
X: 9,316,989 (GRCm39) |
D246H |
probably benign |
Het |
| Dnah17 |
T |
C |
11: 117,964,486 (GRCm39) |
K2444E |
probably benign |
Het |
| Dnajc3 |
G |
A |
14: 119,208,159 (GRCm39) |
V265M |
probably damaging |
Het |
| Flg2 |
T |
A |
3: 93,127,753 (GRCm39) |
Y2222N |
unknown |
Het |
| Flnc |
G |
T |
6: 29,446,229 (GRCm39) |
G882V |
probably damaging |
Het |
| Fndc5 |
T |
A |
4: 129,032,514 (GRCm39) |
V39D |
probably damaging |
Het |
| Gabrr3 |
A |
T |
16: 59,281,758 (GRCm39) |
H371L |
probably benign |
Het |
| Gm10717 |
A |
T |
9: 3,030,438 (GRCm39) |
H33L |
probably damaging |
Het |
| Gm5422 |
A |
G |
10: 31,124,646 (GRCm39) |
|
noncoding transcript |
Het |
| Kri1 |
G |
A |
9: 21,190,668 (GRCm39) |
Q280* |
probably null |
Het |
| Lcp1 |
T |
C |
14: 75,466,738 (GRCm39) |
V615A |
probably benign |
Het |
| Ltbp4 |
T |
C |
7: 27,027,149 (GRCm39) |
Y407C |
probably damaging |
Het |
| Med30 |
G |
T |
15: 52,584,462 (GRCm39) |
D127Y |
probably damaging |
Het |
| Mybpc2 |
A |
G |
7: 44,164,317 (GRCm39) |
V416A |
probably benign |
Het |
| Notch2 |
C |
T |
3: 98,044,898 (GRCm39) |
R1607C |
probably damaging |
Het |
| Nr4a3 |
T |
A |
4: 48,056,525 (GRCm39) |
|
probably null |
Het |
| Ntf5 |
G |
T |
7: 45,065,354 (GRCm39) |
R162L |
probably benign |
Het |
| Nxpe3 |
A |
G |
16: 55,711,034 (GRCm39) |
W2R |
possibly damaging |
Het |
| Or10d1c |
T |
C |
9: 38,893,573 (GRCm39) |
I256V |
possibly damaging |
Het |
| Or1m1 |
G |
A |
9: 18,666,134 (GRCm39) |
R266C |
probably damaging |
Het |
| Or5p58 |
A |
T |
7: 107,694,433 (GRCm39) |
C115S |
probably benign |
Het |
| Pan2 |
C |
A |
10: 128,144,002 (GRCm39) |
D99E |
probably benign |
Het |
| Pcdh12 |
T |
C |
18: 38,414,797 (GRCm39) |
H776R |
possibly damaging |
Het |
| Prdm2 |
T |
C |
4: 142,859,264 (GRCm39) |
H1342R |
possibly damaging |
Het |
| Prpf8 |
A |
G |
11: 75,394,464 (GRCm39) |
T1800A |
probably benign |
Het |
| Prss40 |
T |
C |
1: 34,591,760 (GRCm39) |
*148W |
probably null |
Het |
| Pygo1 |
C |
T |
9: 72,852,061 (GRCm39) |
P83S |
probably damaging |
Het |
| Raf1 |
G |
T |
6: 115,596,317 (GRCm39) |
S619R |
probably damaging |
Het |
| Rtf1 |
A |
G |
2: 119,560,405 (GRCm39) |
M596V |
possibly damaging |
Het |
| Slc12a5 |
T |
A |
2: 164,829,126 (GRCm39) |
D578E |
possibly damaging |
Het |
| Slc35b4 |
A |
G |
6: 34,153,737 (GRCm39) |
V18A |
probably damaging |
Het |
| Spata31 |
T |
A |
13: 65,070,783 (GRCm39) |
I977K |
probably benign |
Het |
| Tor2a |
T |
C |
2: 32,650,672 (GRCm39) |
I222T |
probably damaging |
Het |
| Trim23 |
T |
C |
13: 104,334,541 (GRCm39) |
V347A |
probably damaging |
Het |
| Trip11 |
A |
G |
12: 101,851,386 (GRCm39) |
S893P |
probably damaging |
Het |
| Trmt10c |
G |
A |
16: 55,855,324 (GRCm39) |
P104S |
probably damaging |
Het |
| Ubr3 |
A |
T |
2: 69,850,877 (GRCm39) |
Y1765F |
probably damaging |
Het |
| Zfp951 |
C |
T |
5: 104,962,712 (GRCm39) |
E285K |
probably damaging |
Het |
|
| Other mutations in Or14j4 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01984:Or14j4
|
APN |
17 |
37,934,552 (GRCm39) |
intron |
probably benign |
|
|
R1132:Or14j4
|
UTSW |
17 |
37,921,333 (GRCm39) |
missense |
possibly damaging |
0.90 |
|
R1829:Or14j4
|
UTSW |
17 |
37,921,168 (GRCm39) |
missense |
probably benign |
0.04 |
|
R1831:Or14j4
|
UTSW |
17 |
37,920,730 (GRCm39) |
missense |
possibly damaging |
0.92 |
|
R1872:Or14j4
|
UTSW |
17 |
37,920,803 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2140:Or14j4
|
UTSW |
17 |
37,921,362 (GRCm39) |
missense |
probably benign |
|
|
R2142:Or14j4
|
UTSW |
17 |
37,921,362 (GRCm39) |
missense |
probably benign |
|
|
R3079:Or14j4
|
UTSW |
17 |
37,921,169 (GRCm39) |
missense |
probably benign |
0.07 |
|
R3080:Or14j4
|
UTSW |
17 |
37,921,169 (GRCm39) |
missense |
probably benign |
0.07 |
|
R5250:Or14j4
|
UTSW |
17 |
37,920,851 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R5586:Or14j4
|
UTSW |
17 |
37,921,145 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5921:Or14j4
|
UTSW |
17 |
37,921,110 (GRCm39) |
nonsense |
probably null |
|
|
R6469:Or14j4
|
UTSW |
17 |
37,921,204 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6473:Or14j4
|
UTSW |
17 |
37,920,887 (GRCm39) |
missense |
possibly damaging |
0.46 |
|
R6754:Or14j4
|
UTSW |
17 |
37,921,046 (GRCm39) |
missense |
probably benign |
|
|
R7457:Or14j4
|
UTSW |
17 |
37,921,456 (GRCm39) |
missense |
possibly damaging |
0.60 |
|
R7736:Or14j4
|
UTSW |
17 |
37,921,303 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7814:Or14j4
|
UTSW |
17 |
37,921,547 (GRCm39) |
missense |
probably benign |
0.04 |
|
R8560:Or14j4
|
UTSW |
17 |
37,920,949 (GRCm39) |
missense |
possibly damaging |
0.82 |
|
R9243:Or14j4
|
UTSW |
17 |
37,921,408 (GRCm39) |
missense |
probably benign |
0.01 |
|
R9308:Or14j4
|
UTSW |
17 |
37,921,246 (GRCm39) |
missense |
possibly damaging |
0.73 |
|
R9479:Or14j4
|
UTSW |
17 |
37,920,718 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Z1177:Or14j4
|
UTSW |
17 |
37,920,944 (GRCm39) |
missense |
probably benign |
0.02 |
|
| Predicted Primers |
|
| Posted On |
2016-10-24 |
Incidental Mutation